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The map label for this gene is 169628599

Identifier: 169628599

GI number: 169628599

Start: 1520093

End: 1520845

Strand: Reverse

Name: 169628599

Synonym: MAB_1508c

Alternate gene names: NA

Gene position: 1520845-1520093 (Counterclockwise)

Preceding gene: 169628606

Following gene: 169628597

Centisome position: 30.01

GC content: 63.21

Gene sequence:

>753_bases
ATGCGACATGCCGGTGTCGGCCACGAGGCCAGGACGACCAGCACACAGGGCCCTTCACACAGCCCCAAGCGGGAACGGCG
GCGCCGCGGCTCCATCACGGCCGAGGACATCATCGCCGGAGCCTTTGAGCTCGCCGAGGAAATTGGGATAAGTGGGCTGA
GCATGCCGCTGCTAGCGAAGCATCTCGATGTCGGCGTCACCAGTATCTACTGGTATTTCCGCAAAAAGGGTGAGCTGCTC
GACGCGATGACCGACCGTGCGACCAAGCAGTATCACTTCGCCGCTCCCTTCGTCGGCGACGAAACCTGGCAGGACGCGCT
GCGCAGCCACACCCATCGAATGCGCGAGGCGTTTCGAGAGCGACCGGTACTGGTCGAGCTCATCCTGATGCGCACCAGCG
AGCTCAGCAGTGAGGCGCTGCAGGCGAGCATCCAAAACCTGGAGTCACTTGTCCGGACCCTGATCGGCGTCGGCTTCAGC
CCGGATAACGCCCTGGATGTGTATTTCGCGTTGTCCTTGCATATTCGCGGGGTTGTGGTGCTTGAGCACATGGATACCGT
GATGCCCGCCTCCGGAGAAGCCCGCAGTCTGGTACCGAGCGCCACGCTGGCCCCGACCCTGCACGAGCTGGCAAGCCGCG
GTCATTCGATCGCGACGATCTCCGACGCAAACTTCGACTTCACGGTCGAAGCCATCATCGAGCGCGCCGAGAACCTGCTC
GCGCAGGACATCGCGGCGCGCGAAGCTTCCTGA

Upstream 100 bases:

>100_bases
TACCGCCACGTTCCTGCGGTATCCTGCCAACTTGCTATCAGGGCCTTCAACGGTAGGACGGGGAAAGAGCGACGCCACGG
GGGCACGACGAGGATTACAC

Downstream 100 bases:

>100_bases
TCGGGCTCAGACCTTGGAATTCAGCAGCTCGTCGATCTTCTGAAGCCGCTGGTCGGACAACGCCTGGTTGTCGATGGACC
GATCCGGCGAGCAGGTGACA

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRHAGVGHEARTTSTQGPSHSPKRERRRRGSITAEDIIAGAFELAEEIGISGLSMPLLAKHLDVGVTSIYWYFRKKGELL
DAMTDRATKQYHFAAPFVGDETWQDALRSHTHRMREAFRERPVLVELILMRTSELSSEALQASIQNLESLVRTLIGVGFS
PDNALDVYFALSLHIRGVVVLEHMDTVMPASGEARSLVPSATLAPTLHELASRGHSIATISDANFDFTVEAIIERAENLL
AQDIAAREAS

Sequences:

>Translated_250_residues
MRHAGVGHEARTTSTQGPSHSPKRERRRRGSITAEDIIAGAFELAEEIGISGLSMPLLAKHLDVGVTSIYWYFRKKGELL
DAMTDRATKQYHFAAPFVGDETWQDALRSHTHRMREAFRERPVLVELILMRTSELSSEALQASIQNLESLVRTLIGVGFS
PDNALDVYFALSLHIRGVVVLEHMDTVMPASGEARSLVPSATLAPTLHELASRGHSIATISDANFDFTVEAIIERAENLL
AQDIAAREAS
>Mature_250_residues
MRHAGVGHEARTTSTQGPSHSPKRERRRRGSITAEDIIAGAFELAEEIGISGLSMPLLAKHLDVGVTSIYWYFRKKGELL
DAMTDRATKQYHFAAPFVGDETWQDALRSHTHRMREAFRERPVLVELILMRTSELSSEALQASIQNLESLVRTLIGVGFS
PDNALDVYFALSLHIRGVVVLEHMDTVMPASGEARSLVPSATLAPTLHELASRGHSIATISDANFDFTVEAIIERAENLL
AQDIAAREAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR004111
- InterPro:   IPR001647 [H]

Pfam domain/function: PF02909 TetR_C; PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 27556; Mature: 27556

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAGVGHEARTTSTQGPSHSPKRERRRRGSITAEDIIAGAFELAEEIGISGLSMPLLAK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
HLDVGVTSIYWYFRKKGELLDAMTDRATKQYHFAAPFVGDETWQDALRSHTHRMREAFRE
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RPVLVELILMRTSELSSEALQASIQNLESLVRTLIGVGFSPDNALDVYFALSLHIRGVVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEHHHHHEEH
LEHMDTVMPASGEARSLVPSATLAPTLHELASRGHSIATISDANFDFTVEAIIERAENLL
EEHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
AQDIAAREAS
HHHHHHHCCC
>Mature Secondary Structure
MRHAGVGHEARTTSTQGPSHSPKRERRRRGSITAEDIIAGAFELAEEIGISGLSMPLLAK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
HLDVGVTSIYWYFRKKGELLDAMTDRATKQYHFAAPFVGDETWQDALRSHTHRMREAFRE
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RPVLVELILMRTSELSSEALQASIQNLESLVRTLIGVGFSPDNALDVYFALSLHIRGVVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEHHHHHEEH
LEHMDTVMPASGEARSLVPSATLAPTLHELASRGHSIATISDANFDFTVEAIIERAENLL
EEHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
AQDIAAREAS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]