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The map label for this gene is 169628585

Identifier: 169628585

GI number: 169628585

Start: 1506972

End: 1507544

Strand: Direct

Name: 169628585

Synonym: MAB_1494

Alternate gene names: NA

Gene position: 1506972-1507544 (Clockwise)

Preceding gene: 169628583

Following gene: 169628586

Centisome position: 29.74

GC content: 63.53

Gene sequence:

>573_bases
TTGAGCACCCCGCGCGAACGAATGGTTGCCTCGGCAGCCCTGTTGATCCGCGAGCGAGGAGCTCACGCCACGGCCATCTC
CGATGTTCTCGAGCACAGCGGTGCGCCGCGTGGCTCCGCATATCACTACTTTCCGGGCGGGCGGACCCAACTGCTGAGTG
AGGCAGTGGATCTGGCGGGCGAATACATCGCCGGGATGATCGATGCCAAACCCTCGGCGGTAGACGCGCTGGATATTCTC
GTCGCGTCCTATCGAAAACAACTCGTGCGGAGCGACTTCCGGGCGGGGTGTCCGGTGGTGGCAGTCGCGGTCGAGGCCGG
CGATCCGGAGAGCCCAGCCAGTAGTCAGAAGCTGATCGAACACTCGGCGGCCGTCTTCCGGCGTTGGATCGACCTCATCG
CCGACAAGCTGGTCGCCGTCGGGGTTGTCCGTACGCGGGCCGACGAGCTGGCGATCCTGATGACGACCTCTCTGGAAGGC
GCAATCATTATCGCGCGATCGACTCGCGACATCACGCCAATCGACGTGGTGCACAGGCAGTTACGCACTCTCATTGAGGA
GGCCGGACAATGA

Upstream 100 bases:

>100_bases
AATGCGCAGGGTTTCGTAGTCGGACATTGACTTCTCCGGATCGGTGGCGGATTATGTAGAGCATCATACATAGACCGGAA
CTCCTCGGGAAGGACGACGA

Downstream 100 bases:

>100_bases
CCGCCGAATGGTTGCCCACCGCATGCATCTTGTGTGAATGTAACTGCGGCATCGTGGTGCAGACGGAGGGGCGCACCCTC
GCGAAGATCCGCGGTGACAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSTPRERMVASAALLIRERGAHATAISDVLEHSGAPRGSAYHYFPGGRTQLLSEAVDLAGEYIAGMIDAKPSAVDALDIL
VASYRKQLVRSDFRAGCPVVAVAVEAGDPESPASSQKLIEHSAAVFRRWIDLIADKLVAVGVVRTRADELAILMTTSLEG
AIIIARSTRDITPIDVVHRQLRTLIEEAGQ

Sequences:

>Translated_190_residues
MSTPRERMVASAALLIRERGAHATAISDVLEHSGAPRGSAYHYFPGGRTQLLSEAVDLAGEYIAGMIDAKPSAVDALDIL
VASYRKQLVRSDFRAGCPVVAVAVEAGDPESPASSQKLIEHSAAVFRRWIDLIADKLVAVGVVRTRADELAILMTTSLEG
AIIIARSTRDITPIDVVHRQLRTLIEEAGQ
>Mature_189_residues
STPRERMVASAALLIRERGAHATAISDVLEHSGAPRGSAYHYFPGGRTQLLSEAVDLAGEYIAGMIDAKPSAVDALDILV
ASYRKQLVRSDFRAGCPVVAVAVEAGDPESPASSQKLIEHSAAVFRRWIDLIADKLVAVGVVRTRADELAILMTTSLEGA
IIIARSTRDITPIDVVHRQLRTLIEEAGQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20397; Mature: 20265

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRERMVASAALLIRERGAHATAISDVLEHSGAPRGSAYHYFPGGRTQLLSEAVDLAG
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
EYIAGMIDAKPSAVDALDILVASYRKQLVRSDFRAGCPVVAVAVEAGDPESPASSQKLIE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
HSAAVFRRWIDLIADKLVAVGVVRTRADELAILMTTSLEGAIIIARSTRDITPIDVVHRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCHHHHHHHH
LRTLIEEAGQ
HHHHHHHCCC
>Mature Secondary Structure 
STPRERMVASAALLIRERGAHATAISDVLEHSGAPRGSAYHYFPGGRTQLLSEAVDLAG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHH
EYIAGMIDAKPSAVDALDILVASYRKQLVRSDFRAGCPVVAVAVEAGDPESPASSQKLIE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
HSAAVFRRWIDLIADKLVAVGVVRTRADELAILMTTSLEGAIIIARSTRDITPIDVVHRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCCCCCHHHHHHHH
LRTLIEEAGQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]