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The map label for this gene is 169628551

Identifier: 169628551

GI number: 169628551

Start: 1470132

End: 1470830

Strand: Direct

Name: 169628551

Synonym: MAB_1460

Alternate gene names: NA

Gene position: 1470132-1470830 (Clockwise)

Preceding gene: 169628549

Following gene: 169628552

Centisome position: 29.01

GC content: 63.81

Gene sequence:

>699_bases
GTGCGTCTCGTCGTTGCTCAGTGCACCGTTAATTATGTTGGCCGGCTGACCGCCCACCTGCCATCTGCCAAAAGGCTCTT
GCTCATCAAGGCCGACGGCTCGGTGAGCGTGCATGCCGATGACCGCGCGTACAAGCCGCTGAACTGGATGAGTCCGCCAT
GCTGGCTCACCGAAACCGAGGGTGAAGGTGGCGATGACACCTCGGAATCGGGTGCACCGACCGTCTGGGTGGTGGAAAAC
AAGGCGGGCGAGCAGCTGCGGATCACGATCGAGAGCATCGAGCACGACTCCGCGCATGAGCTTGGCGTAGACCCGGGCCT
CGTCAAGGACGGCGTCGAGGCGCATCTGCAGGAGTTGCTCGCCGAGCACGTCGCGCTGCTCGGCGACGGATACACCCTGG
TGCGTCGTGAGTACATGACACCGATCGGTCCGGTGGACCTGCTGTGCCGCGACGCCGACGGTGCGACGGTGGCGGTGGAG
ATCAAGCGCCGCGGCGAGATCGACGGAGTCGAGCAGCTGACCCGCTACCTCGAACTACTGAATCGCGACACCACGCTGGC
GCCGGTGGCCGGAGTCTTTGCGGCGCAGCAGATCAAGCCACAGGCTCGTACGCTTGCCGAAGACCGTGGGATCCGGTGCC
TCACACTGGATTACGACGCTATGCGGGGAATGGACTCGGACGAGTTCCGATTGTTCTGA

Upstream 100 bases:

>100_bases
CTGTAATCGCGCCCAACGCACGGCCCACCCGCCGCGACACTGCGCGAATCGACTCGTTTGCCATAGTTGTTGCCAGCCTA
ACGCCCTATACAGTGGGCCG

Downstream 100 bases:

>100_bases
CATGGTTCGTCACGGAAAGCGTCGTCAACCGCGCCGAGAGGTCCCGGCGGCGCTGTCGATCGGCGGTGACCAGGTGGAGC
AGGGTGTCGATGGCTTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRLVVAQCTVNYVGRLTAHLPSAKRLLLIKADGSVSVHADDRAYKPLNWMSPPCWLTETEGEGGDDTSESGAPTVWVVEN
KAGEQLRITIESIEHDSAHELGVDPGLVKDGVEAHLQELLAEHVALLGDGYTLVRREYMTPIGPVDLLCRDADGATVAVE
IKRRGEIDGVEQLTRYLELLNRDTTLAPVAGVFAAQQIKPQARTLAEDRGIRCLTLDYDAMRGMDSDEFRLF

Sequences:

>Translated_232_residues
MRLVVAQCTVNYVGRLTAHLPSAKRLLLIKADGSVSVHADDRAYKPLNWMSPPCWLTETEGEGGDDTSESGAPTVWVVEN
KAGEQLRITIESIEHDSAHELGVDPGLVKDGVEAHLQELLAEHVALLGDGYTLVRREYMTPIGPVDLLCRDADGATVAVE
IKRRGEIDGVEQLTRYLELLNRDTTLAPVAGVFAAQQIKPQARTLAEDRGIRCLTLDYDAMRGMDSDEFRLF
>Mature_232_residues
MRLVVAQCTVNYVGRLTAHLPSAKRLLLIKADGSVSVHADDRAYKPLNWMSPPCWLTETEGEGGDDTSESGAPTVWVVEN
KAGEQLRITIESIEHDSAHELGVDPGLVKDGVEAHLQELLAEHVALLGDGYTLVRREYMTPIGPVDLLCRDADGATVAVE
IKRRGEIDGVEQLTRYLELLNRDTTLAPVAGVFAAQQIKPQARTLAEDRGIRCLTLDYDAMRGMDSDEFRLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1460_MYCA9 (B1MLW9)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001702200.1
- EnsemblBacteria:   EBMYCT00000005730
- GeneID:   5963981
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_1460
- GeneTree:   EBGT00050000015755
- HOGENOM:   HBG322466
- OMA:   VDYVGRL
- ProtClustDB:   PRK03298
- BioCyc:   MABS561007:MAB_1460-MONOMER
- HAMAP:   MF_00722
- InterPro:   IPR002793

Pfam domain/function: PF01939 DUF91

EC number: NA

Molecular weight: Translated: 25523; Mature: 25523

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVVAQCTVNYVGRLTAHLPSAKRLLLIKADGSVSVHADDRAYKPLNWMSPPCWLTETE
CEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECC
GEGGDDTSESGAPTVWVVENKAGEQLRITIESIEHDSAHELGVDPGLVKDGVEAHLQELL
CCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHH
AEHVALLGDGYTLVRREYMTPIGPVDLLCRDADGATVAVEIKRRGEIDGVEQLTRYLELL
HHHHHHHCCCHHHHHHHHCCCCCCHHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHH
NRDTTLAPVAGVFAAQQIKPQARTLAEDRGIRCLTLDYDAMRGMDSDEFRLF
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC
>Mature Secondary Structure
MRLVVAQCTVNYVGRLTAHLPSAKRLLLIKADGSVSVHADDRAYKPLNWMSPPCWLTETE
CEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECC
GEGGDDTSESGAPTVWVVENKAGEQLRITIESIEHDSAHELGVDPGLVKDGVEAHLQELL
CCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHH
AEHVALLGDGYTLVRREYMTPIGPVDLLCRDADGATVAVEIKRRGEIDGVEQLTRYLELL
HHHHHHHCCCHHHHHHHHCCCCCCHHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHH
NRDTTLAPVAGVFAAQQIKPQARTLAEDRGIRCLTLDYDAMRGMDSDEFRLF
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA