| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628549
Identifier: 169628549
GI number: 169628549
Start: 1467622
End: 1468491
Strand: Direct
Name: 169628549
Synonym: MAB_1458
Alternate gene names: NA
Gene position: 1467622-1468491 (Clockwise)
Preceding gene: 169628548
Following gene: 169628551
Centisome position: 28.96
GC content: 63.22
Gene sequence:
>870_bases GTGCAGGCATTCAAGGGGCGCTTCAGGTTGAAACCGGCCGCCACCACGGTGGGTGCGGTGGTGCTTGTACTGGTCATCTA CGTGGGGTTTCTCGCCATCTATCGGATGCTGGATCATCACTCCGGTCCGGAGTCGGCCGACCTGGACCTGTCCCGGGACA ACGAGACCGTGGTAGTGATCGACCTCCAGGACCTGCGGACGGTGAACAACCGGCTGGACGCGGAGGTGGTGGTGCTGCCG GCGAAAACGACCCTCGACGCCTTCGGGCTGCTGAACGCGGATATGTCGGTGCGATTGGTGTCCTCCCTCGACTACGGCGA GCGTCATTTTCCGCGCGGCACCCTCCCCGCGGCCATGGATGACACGCTGGTCGCGACGGGTGACGCTCAGTCATGGCCGT TCGACGAATACTCGACCGGTAATCTGCGCGCAGAAGTCATGGTGGGTAATGGCGTTGGACGTCGCCCGGTGCCTGCGCGT ATCGAAGTGATCGGGAGTTTGGGCGGATGGCGTGTGTCGACGGCGACGTCGCAGGCTCCCGCGGGCAAGGGCGACCAGAC GACGATCCGGTTGGTGCGCGCCCGTGGCACCCTGGCATTCGATGTTGGCATCTGCCTGGTGCTGATCACACTGCCCACAA TGGCGCTTATTGTGGCCATCGAGACGGTCAAGGGCAGAAAGAAGTTCCATCCACCGCTGACAACATGGTTCGGCACCATG CTGTTCGCGATTGTTCCGTTGCGGAACATCTTGCCGGGAGCGCCGCCGCCGGGGGCATGGATCGATCAGGCTCTCGTGCT GTGGGTGCTCATCGCGCTGGTGGTGGCGATGGTGCTCTACGTCGAGGCGTGGTGGAAACAGTCCGACTAA
Upstream 100 bases:
>100_bases ATTGGAAATGCCCCCCAGGAAACTGGGGGGCATTTTCATATTCTGGCTGCTAGATTTCTGAAACGGCGTCGCGGTAGAGA GCGGTAGAGATAGGAATCGT
Downstream 100 bases:
>100_bases ACAGGCACCGCGAGTTCGGTGGGTTCGGTGCGTCCGCGCAGCGTCACCGTATCGCCGGAACGCCAATGCAGGGCTTCACG ATGGTGTGCGCGCAGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQAFKGRFRLKPAATTVGAVVLVLVIYVGFLAIYRMLDHHSGPESADLDLSRDNETVVVIDLQDLRTVNNRLDAEVVVLP AKTTLDAFGLLNADMSVRLVSSLDYGERHFPRGTLPAAMDDTLVATGDAQSWPFDEYSTGNLRAEVMVGNGVGRRPVPAR IEVIGSLGGWRVSTATSQAPAGKGDQTTIRLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTM LFAIVPLRNILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWWKQSD
Sequences:
>Translated_289_residues MQAFKGRFRLKPAATTVGAVVLVLVIYVGFLAIYRMLDHHSGPESADLDLSRDNETVVVIDLQDLRTVNNRLDAEVVVLP AKTTLDAFGLLNADMSVRLVSSLDYGERHFPRGTLPAAMDDTLVATGDAQSWPFDEYSTGNLRAEVMVGNGVGRRPVPAR IEVIGSLGGWRVSTATSQAPAGKGDQTTIRLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTM LFAIVPLRNILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWWKQSD >Mature_289_residues MQAFKGRFRLKPAATTVGAVVLVLVIYVGFLAIYRMLDHHSGPESADLDLSRDNETVVVIDLQDLRTVNNRLDAEVVVLP AKTTLDAFGLLNADMSVRLVSSLDYGERHFPRGTLPAAMDDTLVATGDAQSWPFDEYSTGNLRAEVMVGNGVGRRPVPAR IEVIGSLGGWRVSTATSQAPAGKGDQTTIRLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTM LFAIVPLRNILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWWKQSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31412; Mature: 31412
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFKGRFRLKPAATTVGAVVLVLVIYVGFLAIYRMLDHHSGPESADLDLSRDNETVVVI CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEE DLQDLRTVNNRLDAEVVVLPAKTTLDAFGLLNADMSVRLVSSLDYGERHFPRGTLPAAMD EHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCCC DTLVATGDAQSWPFDEYSTGNLRAEVMVGNGVGRRPVPARIEVIGSLGGWRVSTATSQAP CCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHEEECCCCEEEECCCCCCC AGKGDQTTIRLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTM CCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHH LFAIVPLRNILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWWKQSD HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQAFKGRFRLKPAATTVGAVVLVLVIYVGFLAIYRMLDHHSGPESADLDLSRDNETVVVI CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEE DLQDLRTVNNRLDAEVVVLPAKTTLDAFGLLNADMSVRLVSSLDYGERHFPRGTLPAAMD EHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCCC DTLVATGDAQSWPFDEYSTGNLRAEVMVGNGVGRRPVPARIEVIGSLGGWRVSTATSQAP CCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHEEECCCCEEEECCCCCCC AGKGDQTTIRLVRARGTLAFDVGICLVLITLPTMALIVAIETVKGRKKFHPPLTTWFGTM CCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHH LFAIVPLRNILPGAPPPGAWIDQALVLWVLIALVVAMVLYVEAWWKQSD HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA