Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169628485

Identifier: 169628485

GI number: 169628485

Start: 1393781

End: 1394542

Strand: Reverse

Name: 169628485

Synonym: MAB_1394c

Alternate gene names: NA

Gene position: 1394542-1393781 (Counterclockwise)

Preceding gene: 169628488

Following gene: 169628484

Centisome position: 27.52

GC content: 66.54

Gene sequence:

>762_bases
ATGCCGATGAGCACTCGCATCACCGAACCGCAGCGGCAGCTCGCGTTGGGGGGCAAGAGCAAGGAGTCCAAGCCGGGCGC
CTCGGGCAAGCTCCTCTCCCTCGTCCTGGACCAGAGCACCAAGGTTCAGGAGCCCGCGGTACGCGCATACGTCCAGAAGC
TACGAGCCACTCACCCCACCGCGACACCCGCCGATGTCGTCGCGATGCTGGAGAAGCGATATCTGGCAACGGTGATGGGC
AGCGGTGCGGCCGTCGGCGCGGCCGCCGCATTCCCCGGCGTAGGCACGCTGGCCGCGCTGTCGGCGACGGCCGGCGAGGC
TGTGCTGTTCCTGGAGGCGACATCGCTGTTCACTTTGGCGCTGGCTGCCGTCCATGACATCGAACTCGCCAAGATCGAGC
ATCGCCATACGCTGGTGCTCGCGGTTCTGCTCGGTGAGGACGGTGAGACCACGGTCTCGGACGTGCTGGGCAAGGAGCGC
ACCGTCGGCGGAGGCTGGCTGGCCGAGGCCACCTCGACGCTGCCGGTGCCCGCGCTCAGTCATCTCAACGCCACGCTACT
CAAGCGGTTCACCAAGAAATTCGCCGTGAAGCGTGGAGCCATGGCGGCGGGCAAGCTGTTGCCGGCCGGAATCGGGGCCG
TGATCGGCGCGGGCGGCAACCGCTTTATCGGCAAGAGAATAATCACGAACGCACGCAATGCCTTTGGAGAACCCCCGACG
GCATGGCCGGTGCAGCTGCGACTGGTAGCACCGGACAGCTAA

Upstream 100 bases:

>100_bases
TGAGGAACGAAAGACACTCGCCATTCGTCTTCACTACTGTGAGAACAGATCTTCGCTCACAACCAGTGGACCCACCCAGA
CCACAGCACTGAAGGAACAC

Downstream 100 bases:

>100_bases
GCAGGACAGGGGTGGCCGTTCACCGGGAGTCCACCCCTGAGCCATCAGTGGCGCCGATGATGTCGCCCCTGTCATGGAAC
GGCGACATGCCGCCCCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPTATPADVVAMLEKRYLATVMG
SGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLALAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKER
TVGGGWLAEATSTLPVPALSHLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT
AWPVQLRLVAPDS

Sequences:

>Translated_253_residues
MPMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPTATPADVVAMLEKRYLATVMG
SGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLALAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKER
TVGGGWLAEATSTLPVPALSHLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT
AWPVQLRLVAPDS
>Mature_252_residues
PMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPTATPADVVAMLEKRYLATVMGS
GAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLALAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKERT
VGGGWLAEATSTLPVPALSHLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPTA
WPVQLRLVAPDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26200; Mature: 26069

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPT
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHCCCC
ATPADVVAMLEKRYLATVMGSGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHH
LAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKERTVGGGWLAEATSTLPVPALS
HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH
HLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCC
AWPVQLRLVAPDS
CCEEEEEEECCCC
>Mature Secondary Structure 
PMSTRITEPQRQLALGGKSKESKPGASGKLLSLVLDQSTKVQEPAVRAYVQKLRATHPT
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHCCCC
ATPADVVAMLEKRYLATVMGSGAAVGAAAAFPGVGTLAALSATAGEAVLFLEATSLFTLA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHH
LAAVHDIELAKIEHRHTLVLAVLLGEDGETTVSDVLGKERTVGGGWLAEATSTLPVPALS
HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHH
HLNATLLKRFTKKFAVKRGAMAAGKLLPAGIGAVIGAGGNRFIGKRIITNARNAFGEPPT
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCC
AWPVQLRLVAPDS
CCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA