| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is corA [H]
Identifier: 169628469
GI number: 169628469
Start: 1374797
End: 1375891
Strand: Reverse
Name: corA [H]
Synonym: MAB_1378c
Alternate gene names: 169628469
Gene position: 1375891-1374797 (Counterclockwise)
Preceding gene: 169628470
Following gene: 169628468
Centisome position: 27.15
GC content: 62.92
Gene sequence:
>1095_bases ATGGCGCGATTTCCGTCGGTCACCCCGTCGTCGTTGCGTTCCCCCATTCGCGGCCGTGAGCCAGAAACCGATGCCAAACG CATCCCGGTGCCGCTCGCCCGGGCCATCGTCGACTGCGGCGTCTACGTGGACGGAGTGCGGCTGCCGGGCAAGTACACCC CGAACGCCGCGCTGGAAAAGGTGCGCTCGCTGGATCGCGGGTTCGTCTGGGTGGGCCTGCACGAACCCGACGAACATCAG ATGGAGGCGGTAGCCCAACCTTTCGGGCTGCACCGGCTGGCCGTCGAAGACGCCGTGCACGCACACAACCGGCCCAAGCT GGAGCGGTACGACGACACCCTGTTCTTGATCCTGAAAACCGTGAATTACGTTGAGCATGATTCGATCTCGTCGGCCCGCG AGATCGTGGAGACCGGCGAGATCATGATCTTCGTCGGCGGCGACTTCGTGGTGACGGTGCGCCACGGCGACCACAGCGGG TTGGCCAAGGTCCGTGCGCAGATGGACTCCGATCCCGACCACATGCGCCTGGGCCCGTACGCCGTCATGCATGCCATCGC GGACCGCGTCGTCGACTCCTATATGGAGGTGTCCGATCTGGTCGAGACCGACATCGAGGCGATGGAACAGAACGTCTTCT CCCCCCGGTCCAGCACCGACATCGAACACATTTACATGCTCAAACGTGAAGTCGTGGAACTACGCCGCGCCATCAGCCCG CTGACGGGAGCCCTGGCCAAGCTGACCCAGGACCACAATGACCTGATCACCAAGGAAGTGCGCCGGTACCTACGTGACGT GCTCGATCATCAGACGCACGCGGCGGACAAGATCGGAAGCTACGACGAATTGCTCACCTCGCTGGTGAACGCGGCGCTGG GCAAGGTAGCCATGCAGCAGAACACCGACATGCGCAAGATCAGCGCCTGGGTGGGTATCGCGGCATTTCCGACGATGCTT GCCGGCATCTACGGCATGAACTTCGAGCACATGCCCGAGCTGGCCGAGCCCGCCGCGTATCCGATCGTGCTGCTGGTCAT GGTCTTGGTGTGCACGCTGCTGTACCGGAACTTCCGTAAGAACGGCTGGCTGTAA
Upstream 100 bases:
>100_bases ACGTCACCACATCGGCCTTCCAGGCGCTCGCACAGGTTCGCGGGTTACCATCGCGCAGCACGGTTCCGCAGAATTGGTAT GCGAACAGGGAGCCCACATC
Downstream 100 bases:
>100_bases TTCCTTACCGACATACTCGTCATTCGGGGGGACCATGACATTGCGCTTGGCACTGATGCTCATGCTGGCACTGGTGTGCG CGCCGAACGCATTCGCGGAC
Product: magnesium/cobalt transporter CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MARFPSVTPSSLRSPIRGREPETDAKRIPVPLARAIVDCGVYVDGVRLPGKYTPNAALEKVRSLDRGFVWVGLHEPDEHQ MEAVAQPFGLHRLAVEDAVHAHNRPKLERYDDTLFLILKTVNYVEHDSISSAREIVETGEIMIFVGGDFVVTVRHGDHSG LAKVRAQMDSDPDHMRLGPYAVMHAIADRVVDSYMEVSDLVETDIEAMEQNVFSPRSSTDIEHIYMLKREVVELRRAISP LTGALAKLTQDHNDLITKEVRRYLRDVLDHQTHAADKIGSYDELLTSLVNAALGKVAMQQNTDMRKISAWVGIAAFPTML AGIYGMNFEHMPELAEPAAYPIVLLVMVLVCTLLYRNFRKNGWL
Sequences:
>Translated_364_residues MARFPSVTPSSLRSPIRGREPETDAKRIPVPLARAIVDCGVYVDGVRLPGKYTPNAALEKVRSLDRGFVWVGLHEPDEHQ MEAVAQPFGLHRLAVEDAVHAHNRPKLERYDDTLFLILKTVNYVEHDSISSAREIVETGEIMIFVGGDFVVTVRHGDHSG LAKVRAQMDSDPDHMRLGPYAVMHAIADRVVDSYMEVSDLVETDIEAMEQNVFSPRSSTDIEHIYMLKREVVELRRAISP LTGALAKLTQDHNDLITKEVRRYLRDVLDHQTHAADKIGSYDELLTSLVNAALGKVAMQQNTDMRKISAWVGIAAFPTML AGIYGMNFEHMPELAEPAAYPIVLLVMVLVCTLLYRNFRKNGWL >Mature_363_residues ARFPSVTPSSLRSPIRGREPETDAKRIPVPLARAIVDCGVYVDGVRLPGKYTPNAALEKVRSLDRGFVWVGLHEPDEHQM EAVAQPFGLHRLAVEDAVHAHNRPKLERYDDTLFLILKTVNYVEHDSISSAREIVETGEIMIFVGGDFVVTVRHGDHSGL AKVRAQMDSDPDHMRLGPYAVMHAIADRVVDSYMEVSDLVETDIEAMEQNVFSPRSSTDIEHIYMLKREVVELRRAISPL TGALAKLTQDHNDLITKEVRRYLRDVLDHQTHAADKIGSYDELLTSLVNAALGKVAMQQNTDMRKISAWVGIAAFPTMLA GIYGMNFEHMPELAEPAAYPIVLLVMVLVCTLLYRNFRKNGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 40863; Mature: 40731
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFPSVTPSSLRSPIRGREPETDAKRIPVPLARAIVDCGVYVDGVRLPGKYTPNAALEK CCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECEECCCCCCCHHHHHH VRSLDRGFVWVGLHEPDEHQMEAVAQPFGLHRLAVEDAVHAHNRPKLERYDDTLFLILKT HHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHH VNYVEHDSISSAREIVETGEIMIFVGGDFVVTVRHGDHSGLAKVRAQMDSDPDHMRLGPY HHHHHHCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHH AVMHAIADRVVDSYMEVSDLVETDIEAMEQNVFSPRSSTDIEHIYMLKREVVELRRAISP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LTGALAKLTQDHNDLITKEVRRYLRDVLDHQTHAADKIGSYDELLTSLVNAALGKVAMQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC NTDMRKISAWVGIAAFPTMLAGIYGMNFEHMPELAEPAAYPIVLLVMVLVCTLLYRNFRK CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC NGWL CCCC >Mature Secondary Structure ARFPSVTPSSLRSPIRGREPETDAKRIPVPLARAIVDCGVYVDGVRLPGKYTPNAALEK CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEECEECCCCCCCHHHHHH VRSLDRGFVWVGLHEPDEHQMEAVAQPFGLHRLAVEDAVHAHNRPKLERYDDTLFLILKT HHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHH VNYVEHDSISSAREIVETGEIMIFVGGDFVVTVRHGDHSGLAKVRAQMDSDPDHMRLGPY HHHHHHCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHH AVMHAIADRVVDSYMEVSDLVETDIEAMEQNVFSPRSSTDIEHIYMLKREVVELRRAISP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LTGALAKLTQDHNDLITKEVRRYLRDVLDHQTHAADKIGSYDELLTSLVNAALGKVAMQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC NTDMRKISAWVGIAAFPTMLAGIYGMNFEHMPELAEPAAYPIVLLVMVLVCTLLYRNFRK CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC NGWL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]