| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628468
Identifier: 169628468
GI number: 169628468
Start: 1374262
End: 1374762
Strand: Reverse
Name: 169628468
Synonym: MAB_1377c
Alternate gene names: NA
Gene position: 1374762-1374262 (Counterclockwise)
Preceding gene: 169628469
Following gene: 169628461
Centisome position: 27.13
GC content: 61.88
Gene sequence:
>501_bases ATGACATTGCGCTTGGCACTGATGCTCATGCTGGCACTGGTGTGCGCGCCGAACGCATTCGCGGACCCGGCGCTCCCCGA CTTCTCTTCCATGCCGAAGGCAGCCGCCAAGGACTTCACCGTACGAGACGGTCTTGCCTACTCGGTCCGCGGGTTCCGGA CTCCCAGTGGTGCATACTGCACATCGTCGTCACATCGCGGGATGTCCGCACTCGACTGCCACGGCAGATTCTTCGGCGCG CCCGACGGAGCCAACTCCGCACATCTCTTCAACAACTCGCCGGAACCGCTGCGGTTCGGTACCGAGGACGTGGACTTCAC CAAAACACCAGAATTCGAAGGACATCCGCTACCCCTGCTGCTGCCGGGAGTTGACTACGCCTTCGACAACTCGCACTGCG CATACGTTGCCGGATACCAGCTCGCGTGCGTCATGGACCTCCGAGGCTCTCAGGTCGGCTTCGTTGCCACTCCCACCGAT TTCGCCGCCGTAGGTCAGTAA
Upstream 100 bases:
>100_bases CTGCTGGTCATGGTCTTGGTGTGCACGCTGCTGTACCGGAACTTCCGTAAGAACGGCTGGCTGTAATTCCTTACCGACAT ACTCGTCATTCGGGGGGACC
Downstream 100 bases:
>100_bases CCGCCGCGCTAGCTAGGTTGCGCGTGGGCACGGGAAGGGTCCGTCACGTCGATATCGGCTTGCCGCCAGGCATCCTGCAG GGCCTCGGCGCCCTTGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTLRLALMLMLALVCAPNAFADPALPDFSSMPKAAAKDFTVRDGLAYSVRGFRTPSGAYCTSSSHRGMSALDCHGRFFGA PDGANSAHLFNNSPEPLRFGTEDVDFTKTPEFEGHPLPLLLPGVDYAFDNSHCAYVAGYQLACVMDLRGSQVGFVATPTD FAAVGQ
Sequences:
>Translated_166_residues MTLRLALMLMLALVCAPNAFADPALPDFSSMPKAAAKDFTVRDGLAYSVRGFRTPSGAYCTSSSHRGMSALDCHGRFFGA PDGANSAHLFNNSPEPLRFGTEDVDFTKTPEFEGHPLPLLLPGVDYAFDNSHCAYVAGYQLACVMDLRGSQVGFVATPTD FAAVGQ >Mature_165_residues TLRLALMLMLALVCAPNAFADPALPDFSSMPKAAAKDFTVRDGLAYSVRGFRTPSGAYCTSSSHRGMSALDCHGRFFGAP DGANSAHLFNNSPEPLRFGTEDVDFTKTPEFEGHPLPLLLPGVDYAFDNSHCAYVAGYQLACVMDLRGSQVGFVATPTDF AAVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17717; Mature: 17586
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLALMLMLALVCAPNAFADPALPDFSSMPKAAAKDFTVRDGLAYSVRGFRTPSGAYC CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCCCCCCEE TSSSHRGMSALDCHGRFFGAPDGANSAHLFNNSPEPLRFGTEDVDFTKTPEFEGHPLPLL CCCCCCCCEEEECCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE LPGVDYAFDNSHCAYVAGYQLACVMDLRGSQVGFVATPTDFAAVGQ ECCCCEEECCCCEEEEECCEEEEEEECCCCEEEEEECCCCHHCCCC >Mature Secondary Structure TLRLALMLMLALVCAPNAFADPALPDFSSMPKAAAKDFTVRDGLAYSVRGFRTPSGAYC HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEEECCCCCCCCEE TSSSHRGMSALDCHGRFFGAPDGANSAHLFNNSPEPLRFGTEDVDFTKTPEFEGHPLPLL CCCCCCCCEEEECCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE LPGVDYAFDNSHCAYVAGYQLACVMDLRGSQVGFVATPTDFAAVGQ ECCCCEEECCCCEEEEECCEEEEEEECCCCEEEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA