| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628454
Identifier: 169628454
GI number: 169628454
Start: 1360625
End: 1361068
Strand: Direct
Name: 169628454
Synonym: MAB_1363
Alternate gene names: NA
Gene position: 1360625-1361068 (Clockwise)
Preceding gene: 169628453
Following gene: 169628455
Centisome position: 26.85
GC content: 68.92
Gene sequence:
>444_bases GTGGTGGATAGCGGCTCGTTCCGTAGGGCGTTCTCGAGTTTCTCCTCTTTCTCGCGACTGCCCTCCCCGTTCGCCTCGCA GAGTGGGGCACCGGTGGGCGCGCCGCGCCAGTTCGGGTCCACCGAGCATTTGTCCACGGAGGCGATCGCGGCGTTCGTCG ACGGCGAACTGCGGATGAGTGCGCACCTGCGGGCAGCGCACCATTTGTCGATGTGCGCCGAATGCGCGCTGGAGATCGAC GCACAGCGCCAGGCGCGCACCGCGCTGCGCGACTCCGGAGCCATTCGGGTGCCGGGCTCCTTGCTTGGACTCCTCAGCCA GATTCCGCACATCCCGCATGACGTTGCGCCGCCGCAGCCCTCGGCACACGAGGGTGAGCTGCCGCCCGCGTTGGGTGGTG ACGCGGTGCGGCCGGATAGCCGCGCACGTCGTAAACGCCGGTAG
Upstream 100 bases:
>100_bases CATTGGTGCAGGTTGGTACGCAATGAGTACATTCGCGCGCTATCTTCGAGGTAGGCCGGTACGAGTCCGCCGGCCATTCC GAACCGAAGGGAGCGTCGCC
Downstream 100 bases:
>100_bases GGTGGGCCGGTGACCGCAAATCAGGACACCGCCCCCCGGTTGGCGCCGCGCCCGGTTGACCGGCCGCCTGTCGATCCGGC TTCGCAGCGGGCTTTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVDSGSFRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRMSAHLRAAHHLSMCAECALEID AQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPPQPSAHEGELPPALGGDAVRPDSRARRKRR
Sequences:
>Translated_147_residues MVDSGSFRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRMSAHLRAAHHLSMCAECALEID AQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPPQPSAHEGELPPALGGDAVRPDSRARRKRR >Mature_147_residues MVDSGSFRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRMSAHLRAAHHLSMCAECALEID AQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPPQPSAHEGELPPALGGDAVRPDSRARRKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15686; Mature: 15686
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDSGSFRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRMS CCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH AHLRAAHHLSMCAECALEIDAQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCCCCCCCCCC SAHEGELPPALGGDAVRPDSRARRKRR CCCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MVDSGSFRRAFSSFSSFSRLPSPFASQSGAPVGAPRQFGSTEHLSTEAIAAFVDGELRMS CCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH AHLRAAHHLSMCAECALEIDAQRQARTALRDSGAIRVPGSLLGLLSQIPHIPHDVAPPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCCCCCCCCCC SAHEGELPPALGGDAVRPDSRARRKRR CCCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA