| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628449
Identifier: 169628449
GI number: 169628449
Start: 1355626
End: 1357248
Strand: Reverse
Name: 169628449
Synonym: MAB_1358c
Alternate gene names: NA
Gene position: 1357248-1355626 (Counterclockwise)
Preceding gene: 169628450
Following gene: 169628448
Centisome position: 26.79
GC content: 64.02
Gene sequence:
>1623_bases GTGAGCACCGATTTCGCGACACTTCCCATCCACCGGCCTGGTACCGACGGAACACCCCGGCACCCACTGACCGGCATCGG CACATTGATCATGTTGGCCCTACGCCGCGACCGATTCCGGATTTGTATGTGGGTGGGCTGGCTGACGCTCCTGATGACCT ACACACCGCTGGCCTTCGAGTCCATGTACCCCACCACCGCCGACCGCATGGCGCGGGTCACGATGATGAAGACACCAGCC GGGATCATCATGAGTGGACCAAGCTTTGGCATCAACGAAACCGATGTCGGCGTCATGGTGGCCAACGAACTCATGACCGT CATGATCGCCGCTGCCGCCATCATGTCCATCCTGACGGTCATCCGCCACACCCGGGCCGAAGAAGAGTCCGGTGCCGCTG AGCTGGTGATGTCGGCGGTGATCGGCCATCAAGCACGCACCTACGCCGCCCTGATCGTGGTGGCTCTGATGAATGCCGTC CTCGCCGTCGCCATGACGGCGGCATTGTCCGCAGCCGACTTCGACTTCATCAACAGCCTCGGCATCAGCCTTGGAATCAT CGGAGCCTCCATGGTTTTCGCCGGCCTCGGGGCTGTTACCGCACAGCTGTGGCGAACCGCGCGAGCGGCCAGCGGAGCCG CCATGGCGGCCTTGGCCGCGGCGGTCGTGGTTCGTGGCCTCGGCGACATCATCGACAACAAGGGCAGTGCGCTCAGCTGG TTCTCCCCGTTGGCATGGGCCCAGCAGATGCGCCCCTTCGTCGACCTGCGCTGGTGGCCCTTCCTATTACTGCTGGGCAC CACGCTCGCGCTGATGCTGACCGCACACCTGCTGGAAGGACATCGCCAATACGACGCGGGCGTACTACCCTCCCGCGGCG AGAACCCCAACGCTCCCGAGATCAAGACGGTAGTCGGGCTGAACGGGCAACTACAGCGTGGACTGATCACCGGATGGGGA TTCGGAGTCTTTCTGGGCGGTATGGCATTCGGTTCGATGGCCAAGAGCCTGCGAGATTCCATCGACACCAACCCCTTACT GGCCCGTGCGTTCACGGCACACGGCCTCGACAGCATTTTCGCCACCTTCAATCAGGTGCTCGCCATCGCGGTCACCGCGT ACGCGGTTTCCGCGATCCTGAGGCTTGCCAAGGACGAACAATCGGGTATCACCGAGGCGGTGCTGGCCCGTGCCGTGTCG CGCTGGACCTGGCTGCTGTCCGCGGTGGCGATGACGGCCCTGGGCAGCGCGCTATTGATGACGATCGCCGGTCTCGGCGC GGGACTGGGCGCCGCCAGCACCTTGCACGACCCGGATCTGGTGTGGCGTCTTATTCTTGCCGGTCTTGCTCAGATTCCGG CACTGTTGGTCGTGTGCGGTATCGCGGCTGTCGCGGTCGCCCTGCGGCAGAGCTGGATTGGCTGGGTGGTGGTGGCATTC TCGGTGGGCATGCTCTATGCCGGGATACTGCAGCTGCCCACCTGGATGGTGAAGCTATCGCCGGTGATGCGCGTCAGCGC ACCCGTGGAGTATCCATGGCTCACCATGTCACTTCTTATCGTCCTCGGCGCGGGTTTGGCCGCGGCCGCAGGTGCCCTGT ATCGCCGGCGCGACGCGATCTGA
Upstream 100 bases:
>100_bases GCACGATGGAACAATTGGCCGGTCTCGGGATCGTCGACCTGAGCGTGGCCCCCGCCTCCCTCGAAGAATTGTTCATGCGC GAGTACCAGGGCGCCTCGCG
Downstream 100 bases:
>100_bases GAAAGGAACATCCATGAAAACTGGTGCACAAGCCCTGATTTCGGGCCTGACTGGCCTGGCTGTGTTCGGCGCGGCGCTGT TCTGGCCCGCAGGCACATTC
Product: ABC transporter permease
Products: NA
Alternate protein names: Exporter Of Polyketide Antibiotics-Like Protein; Exporter Of Polyketide Antibiotics; Anibiotic ABC Transporter Efflux Pump; ABC Transporter Membrane Protein; ABC Transporter Permease Protein; ABC Transporter; Exporter Of Polyketide Antibiotics- Like Protein; Tetronasin Resistance Transmembrane Protein; ABC Antibiotics Transporter; Abc Transporter Integral Membrane Subunit; ABC-2 Type Transport System Permease Protein; ABC Transporter Transmembrane Subunit; TnrB3 Protein; ABC Transporter Permease; Polyketide Antibiotics Exporter; ABC Transporter Polyketide Tetronasin Permease; ABC Type Transport System Permease Protein; Tetronasin-Transport Membrane Protein ABC Transporter; Amino Acid Permease
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSTDFATLPIHRPGTDGTPRHPLTGIGTLIMLALRRDRFRICMWVGWLTLLMTYTPLAFESMYPTTADRMARVTMMKTPA GIIMSGPSFGINETDVGVMVANELMTVMIAAAAIMSILTVIRHTRAEEESGAAELVMSAVIGHQARTYAALIVVALMNAV LAVAMTAALSAADFDFINSLGISLGIIGASMVFAGLGAVTAQLWRTARAASGAAMAALAAAVVVRGLGDIIDNKGSALSW FSPLAWAQQMRPFVDLRWWPFLLLLGTTLALMLTAHLLEGHRQYDAGVLPSRGENPNAPEIKTVVGLNGQLQRGLITGWG FGVFLGGMAFGSMAKSLRDSIDTNPLLARAFTAHGLDSIFATFNQVLAIAVTAYAVSAILRLAKDEQSGITEAVLARAVS RWTWLLSAVAMTALGSALLMTIAGLGAGLGAASTLHDPDLVWRLILAGLAQIPALLVVCGIAAVAVALRQSWIGWVVVAF SVGMLYAGILQLPTWMVKLSPVMRVSAPVEYPWLTMSLLIVLGAGLAAAAGALYRRRDAI
Sequences:
>Translated_540_residues MSTDFATLPIHRPGTDGTPRHPLTGIGTLIMLALRRDRFRICMWVGWLTLLMTYTPLAFESMYPTTADRMARVTMMKTPA GIIMSGPSFGINETDVGVMVANELMTVMIAAAAIMSILTVIRHTRAEEESGAAELVMSAVIGHQARTYAALIVVALMNAV LAVAMTAALSAADFDFINSLGISLGIIGASMVFAGLGAVTAQLWRTARAASGAAMAALAAAVVVRGLGDIIDNKGSALSW FSPLAWAQQMRPFVDLRWWPFLLLLGTTLALMLTAHLLEGHRQYDAGVLPSRGENPNAPEIKTVVGLNGQLQRGLITGWG FGVFLGGMAFGSMAKSLRDSIDTNPLLARAFTAHGLDSIFATFNQVLAIAVTAYAVSAILRLAKDEQSGITEAVLARAVS RWTWLLSAVAMTALGSALLMTIAGLGAGLGAASTLHDPDLVWRLILAGLAQIPALLVVCGIAAVAVALRQSWIGWVVVAF SVGMLYAGILQLPTWMVKLSPVMRVSAPVEYPWLTMSLLIVLGAGLAAAAGALYRRRDAI >Mature_539_residues STDFATLPIHRPGTDGTPRHPLTGIGTLIMLALRRDRFRICMWVGWLTLLMTYTPLAFESMYPTTADRMARVTMMKTPAG IIMSGPSFGINETDVGVMVANELMTVMIAAAAIMSILTVIRHTRAEEESGAAELVMSAVIGHQARTYAALIVVALMNAVL AVAMTAALSAADFDFINSLGISLGIIGASMVFAGLGAVTAQLWRTARAASGAAMAALAAAVVVRGLGDIIDNKGSALSWF SPLAWAQQMRPFVDLRWWPFLLLLGTTLALMLTAHLLEGHRQYDAGVLPSRGENPNAPEIKTVVGLNGQLQRGLITGWGF GVFLGGMAFGSMAKSLRDSIDTNPLLARAFTAHGLDSIFATFNQVLAIAVTAYAVSAILRLAKDEQSGITEAVLARAVSR WTWLLSAVAMTALGSALLMTIAGLGAGLGAASTLHDPDLVWRLILAGLAQIPALLVVCGIAAVAVALRQSWIGWVVVAFS VGMLYAGILQLPTWMVKLSPVMRVSAPVEYPWLTMSLLIVLGAGLAAAAGALYRRRDAI
Specific function: Unknown
COG id: COG3559
COG function: function code M; Putative exporter of polyketide antibiotics
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57139; Mature: 57008
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDFATLPIHRPGTDGTPRHPLTGIGTLIMLALRRDRFRICMWVGWLTLLMTYTPLAFE CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHH SMYPTTADRMARVTMMKTPAGIIMSGPSFGINETDVGVMVANELMTVMIAAAAIMSILTV HCCCCHHHHHHHHHHEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRHTRAEEESGAAELVMSAVIGHQARTYAALIVVALMNAVLAVAMTAALSAADFDFINSL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISLGIIGASMVFAGLGAVTAQLWRTARAASGAAMAALAAAVVVRGLGDIIDNKGSALSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FSPLAWAQQMRPFVDLRWWPFLLLLGTTLALMLTAHLLEGHRQYDAGVLPSRGENPNAPE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IKTVVGLNGQLQRGLITGWGFGVFLGGMAFGSMAKSLRDSIDTNPLLARAFTAHGLDSIF CCEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ATFNQVLAIAVTAYAVSAILRLAKDEQSGITEAVLARAVSRWTWLLSAVAMTALGSALLM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIAGLGAGLGAASTLHDPDLVWRLILAGLAQIPALLVVCGIAAVAVALRQSWIGWVVVAF HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVGMLYAGILQLPTWMVKLSPVMRVSAPVEYPWLTMSLLIVLGAGLAAAAGALYRRRDAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure STDFATLPIHRPGTDGTPRHPLTGIGTLIMLALRRDRFRICMWVGWLTLLMTYTPLAFE CCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHH SMYPTTADRMARVTMMKTPAGIIMSGPSFGINETDVGVMVANELMTVMIAAAAIMSILTV HCCCCHHHHHHHHHHEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRHTRAEEESGAAELVMSAVIGHQARTYAALIVVALMNAVLAVAMTAALSAADFDFINSL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GISLGIIGASMVFAGLGAVTAQLWRTARAASGAAMAALAAAVVVRGLGDIIDNKGSALSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FSPLAWAQQMRPFVDLRWWPFLLLLGTTLALMLTAHLLEGHRQYDAGVLPSRGENPNAPE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IKTVVGLNGQLQRGLITGWGFGVFLGGMAFGSMAKSLRDSIDTNPLLARAFTAHGLDSIF CCEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ATFNQVLAIAVTAYAVSAILRLAKDEQSGITEAVLARAVSRWTWLLSAVAMTALGSALLM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIAGLGAGLGAASTLHDPDLVWRLILAGLAQIPALLVVCGIAAVAVALRQSWIGWVVVAF HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVGMLYAGILQLPTWMVKLSPVMRVSAPVEYPWLTMSLLIVLGAGLAAAAGALYRRRDAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA