| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is ybfF [C]
Identifier: 169628439
GI number: 169628439
Start: 1347471
End: 1348424
Strand: Direct
Name: ybfF [C]
Synonym: MAB_1346
Alternate gene names: 169628439
Gene position: 1347471-1348424 (Clockwise)
Preceding gene: 169628438
Following gene: 169628441
Centisome position: 26.59
GC content: 66.56
Gene sequence:
>954_bases ATGACCTCAACCGTTGGTATCGACTCAAGCTGGATGTCGCCGGCGCCACAGCTCCCGGGCTGGCTGGAGACCCACAGCTG GAACCGGCCCGAATGGACCGTCGAACAGCTGATCGCCGCGAAGAAGGGACGCACCGTTTCTGTGGTGCTGCCCGCGCTCA ACGAGCAGGAGACCGTCGCGGCCGTGATCGACACCATCAGCCCGCTGCTGGGCGGTCTGGTGGACGAGCTGATCGTGCTG GACTCGGGCTCTACCGATGACACCGCCATCAGGGCAGTGGCGGCGGGTGCGCGGGTGGTCAGCCGGGAACAGGCGCTGCC CGAGGTACCGCCGAACCCGGGCAAGGGCGAGGTGCTGTGGCGGTCGGTGGCCGCGACCACCGGTGACCTCATCGCGTTCG TCGACTCCGATCTGATCGACCCCGATCCGATGTTCGTGCCACACCTGCTGGGGCCGCTGCTGTTGGGGCAGGGCATTCAC CTGGTCAAGGGTTTCTATCGGCGTCCCCTCAAGGTCAGCGGGGCCGAGGACGCCAACGGCGGCGGGCGAGTGACCGAACT GGTGGCCCGGCCCATGCTCGCGGCACTTCGGCCCGAACTCAGTTGTGTCGTCCAGCCGCTGGGCGGCGAGTACGCCGGGA CCCGGGAGCTGCTGTCCTCCGTGCCCTTCGCGCCGGGATATGGCGTGGAGATCGGTCTGCTGATCGATACCTACGACAAG CTGGGACTGGGCTCTATCGCCCAGGTGAATCTGGGAGTACGCAGCCACCGCAACCGGCCGCTGGTCGAACTCGGTGTGAT GAGCCGGCAGGTGATGGCCACCATGCTGTCACGGTGTGGGATTCCGGACTCGGGTGTGGGCATCACACAGTTCTTCGCCG ACGGTGACGGATTCACCCCACGCAGTTCGACGGTCTCGCTGGAGGATCGCCCACCGATGAATACCCTGCGCTAG
Upstream 100 bases:
>100_bases TGTTCCGGGTTCATGAGGTCGGGCCCACACGCCGCACGCTGGAAATGGTGGGCTCCATCGTCGGGACCCGCCCACCGGCG CGAACAGTGAGGGGGTTGGC
Downstream 100 bases:
>100_bases GCGTCAGGTCTTCTGAATCTCGCGTTCCCCCGCGGTCGGCGACCAGACCGTGACGATCATGTGGCCGTCTTCGAGTCGTA CCGCTGATGCGCCCTCGACA
Product: putative glucosyl-3-phosphoglycerate synthase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Family 2 Protein; Family 2 Glycosyl Transferase; Glycosyltransferase; Group 2 Family Glycosyl Transferase; Cell Wall Biosynthesis Glycosyl Transferase; Family 2 Glycosyltransferase; Family 2 Glycosyl Transferase Protein; Dolichyl-Phosphate Mannoosyltransferase Related Protein; Polypeptide N-Acetylgalactosaminyltransferase; Glycosyl Transferase Group 2 Family; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTSTVGIDSSWMSPAPQLPGWLETHSWNRPEWTVEQLIAAKKGRTVSVVLPALNEQETVAAVIDTISPLLGGLVDELIVL DSGSTDDTAIRAVAAGARVVSREQALPEVPPNPGKGEVLWRSVAATTGDLIAFVDSDLIDPDPMFVPHLLGPLLLGQGIH LVKGFYRRPLKVSGAEDANGGGRVTELVARPMLAALRPELSCVVQPLGGEYAGTRELLSSVPFAPGYGVEIGLLIDTYDK LGLGSIAQVNLGVRSHRNRPLVELGVMSRQVMATMLSRCGIPDSGVGITQFFADGDGFTPRSSTVSLEDRPPMNTLR
Sequences:
>Translated_317_residues MTSTVGIDSSWMSPAPQLPGWLETHSWNRPEWTVEQLIAAKKGRTVSVVLPALNEQETVAAVIDTISPLLGGLVDELIVL DSGSTDDTAIRAVAAGARVVSREQALPEVPPNPGKGEVLWRSVAATTGDLIAFVDSDLIDPDPMFVPHLLGPLLLGQGIH LVKGFYRRPLKVSGAEDANGGGRVTELVARPMLAALRPELSCVVQPLGGEYAGTRELLSSVPFAPGYGVEIGLLIDTYDK LGLGSIAQVNLGVRSHRNRPLVELGVMSRQVMATMLSRCGIPDSGVGITQFFADGDGFTPRSSTVSLEDRPPMNTLR >Mature_316_residues TSTVGIDSSWMSPAPQLPGWLETHSWNRPEWTVEQLIAAKKGRTVSVVLPALNEQETVAAVIDTISPLLGGLVDELIVLD SGSTDDTAIRAVAAGARVVSREQALPEVPPNPGKGEVLWRSVAATTGDLIAFVDSDLIDPDPMFVPHLLGPLLLGQGIHL VKGFYRRPLKVSGAEDANGGGRVTELVARPMLAALRPELSCVVQPLGGEYAGTRELLSSVPFAPGYGVEIGLLIDTYDKL GLGSIAQVNLGVRSHRNRPLVELGVMSRQVMATMLSRCGIPDSGVGITQFFADGDGFTPRSSTVSLEDRPPMNTLR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33703; Mature: 33572
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTVGIDSSWMSPAPQLPGWLETHSWNRPEWTVEQLIAAKKGRTVSVVLPALNEQETVA CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHH AVIDTISPLLGGLVDELIVLDSGSTDDTAIRAVAAGARVVSREQALPEVPPNPGKGEVLW HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RSVAATTGDLIAFVDSDLIDPDPMFVPHLLGPLLLGQGIHLVKGFYRRPLKVSGAEDANG HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCCC GGRVTELVARPMLAALRPELSCVVQPLGGEYAGTRELLSSVPFAPGYGVEIGLLIDTYDK CHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCHH LGLGSIAQVNLGVRSHRNRPLVELGVMSRQVMATMLSRCGIPDSGVGITQFFADGDGFTP CCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC RSSTVSLEDRPPMNTLR CCCEEEECCCCCCCCCC >Mature Secondary Structure TSTVGIDSSWMSPAPQLPGWLETHSWNRPEWTVEQLIAAKKGRTVSVVLPALNEQETVA CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHH AVIDTISPLLGGLVDELIVLDSGSTDDTAIRAVAAGARVVSREQALPEVPPNPGKGEVLW HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH RSVAATTGDLIAFVDSDLIDPDPMFVPHLLGPLLLGQGIHLVKGFYRRPLKVSGAEDANG HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCCC GGRVTELVARPMLAALRPELSCVVQPLGGEYAGTRELLSSVPFAPGYGVEIGLLIDTYDK CHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCHH LGLGSIAQVNLGVRSHRNRPLVELGVMSRQVMATMLSRCGIPDSGVGITQFFADGDGFTP CCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC RSSTVSLEDRPPMNTLR CCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA