Click here to switch to the map view.

The map label for this gene is 169628436

Identifier: 169628436

GI number: 169628436

Start: 1345160

End: 1345492

Strand: Direct

Name: 169628436

Synonym: MAB_1343

Alternate gene names: NA

Gene position: 1345160-1345492 (Clockwise)

Preceding gene: 169628435

Following gene: 169628438

Centisome position: 26.55

GC content: 64.56

Gene sequence:

>333_bases
ATGGCCGGAACTCGTCGTGCGCGGATAGCGAAACGCCGCCGCCTACGGGTAAGTCGTGCCGACAACGACCTCACCGATGC
TCAATGGTCGCAGCTCGTGCAGGCGTGGGGTGGCTGTGCCTACTGCGGTGCGACGGGAACGGCGTTGCAGCGCGACTGTG
TGCAGCCGATCTCGCGGGGCGGCAGGTACACCCAAGCCAATGTGGTGCCGGCGTGCGGGTCGTGCAACTCCAGCAAATGC
AATGCCGAGGTGACCAGCTGGATGCGGCGCAAACGTCTTGACGAGACGGCGTTTCTGCGTCGATATGTGGAGGTCACTCA
GGCGCTGGCCTAG

Upstream 100 bases:

>100_bases
TCTATCCCGAGTACCCGGAGGAACTGGCGGGCGGACAGCGCCCCAAGGGTTAGCGCGTCGTAAACCGGCGCGGCTGGCTT
GCCGGGATAACGTTCGAGGC

Downstream 100 bases:

>100_bases
GTGGTGTACACGCCCGTCGGCTCGTCGTGATATCCCTTTGCGCCTATCTCGCGCGCCAGCGGACTGCGGAAATCTTGTTC
CGCGGCAAGACAATCGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAGTRRARIAKRRRLRVSRADNDLTDAQWSQLVQAWGGCAYCGATGTALQRDCVQPISRGGRYTQANVVPACGSCNSSKC
NAEVTSWMRRKRLDETAFLRRYVEVTQALA

Sequences:

>Translated_110_residues
MAGTRRARIAKRRRLRVSRADNDLTDAQWSQLVQAWGGCAYCGATGTALQRDCVQPISRGGRYTQANVVPACGSCNSSKC
NAEVTSWMRRKRLDETAFLRRYVEVTQALA
>Mature_109_residues
AGTRRARIAKRRRLRVSRADNDLTDAQWSQLVQAWGGCAYCGATGTALQRDCVQPISRGGRYTQANVVPACGSCNSSKCN
AEVTSWMRRKRLDETAFLRRYVEVTQALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12241; Mature: 12110

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTRRARIAKRRRLRVSRADNDLTDAQWSQLVQAWGGCAYCGATGTALQRDCVQPISRG
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GRYTQANVVPACGSCNSSKCNAEVTSWMRRKRLDETAFLRRYVEVTQALA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGTRRARIAKRRRLRVSRADNDLTDAQWSQLVQAWGGCAYCGATGTALQRDCVQPISRG
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GRYTQANVVPACGSCNSSKCNAEVTSWMRRKRLDETAFLRRYVEVTQALA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA