| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mshB
Identifier: 169628409
GI number: 169628409
Start: 1317656
End: 1318495
Strand: Direct
Name: mshB
Synonym: MAB_1316
Alternate gene names: 169628409
Gene position: 1317656-1318495 (Clockwise)
Preceding gene: 169628408
Following gene: 169628410
Centisome position: 26.0
GC content: 66.79
Gene sequence:
>840_bases ATGACGACTCGACGACTCATGCTGGTGCACGCACACCCCGATGACGAATCTCTGACCACCGGGGGAACCATTGCGCGGTA CGCCGCCGAAGGCGCCGATGTCCAGTTGGTGACCTGCACTCTCGGGGAGGAAGGCGAGGTGATCGGCGATCGTTGGGCGC AGCTGGCCGTTGACCAGGCCGATCAACTCGGCGGATACCGGATCGGAGAACTCTCCACGGCGCTAAGACATCTCGGTGTC GACGGGCCCACCTTTCTGGGCGGCGCCGGGCGCTGGCGTGACTCCGGCATGGCGGACACCACGCCGTTGCACCCACGGGC CTTCGCGGGCGCCGATCTGAACGAGGCGGTGGGCGCGCTGACCGCGCTGATCGACGAACACCGTCCCCATGTCGTCGTCA CCTATGACCCGTTCGGCGGCTACGGACACCCCGATCACATCCAGGCCCACACGGTGACGACCGCGGCCGTGGAAAAAGCG AGCTGGCAGGTGGCCAAGCTGTACTGGACCGTCATCGCGACCAGTGCGCTGGAGACCGGCCTCGCATCGATCACCCAGCT GCCGCCGGGATGCCAGCCGGCGCCGCTGGATCTCATACCCACCTTCGCCGACGAAAAGATCAGTGCCGCCATCGACGTCT CGGGCCACCGCGAGGCCAAGGTCGCGGCGCTGCGCGCGCACGCTACCCAGCTGACGGTGTCCGACGACGGATCCTCGATG GCGCTGTCCAACCTGATCGCGTTGCCCATCGCGGACATCGAGCATTTCGTGCTGGTGCGGGGCGAGCCGGGCGTGGACAC CGGGTGGGAATCAGATCTGTTCGCTGGGGTGGAGTTGTAA
Upstream 100 bases:
>100_bases CCATCGCCGCGGCCGGTCCCAGCGTGCAGAACGTGGAGCTGGCCGGTGCGGTGCCGGTCGGGATTGTGGCCACGGCAGGA GAGTGGAAGAAGACCCGCCC
Downstream 100 bases:
>100_bases GCTCGATTCATGCCACCCGATCAAGACCTGGATCCCAACCAGCAGCACTGGCAAGACCGGCTGGACAACTTCCAATGGGT CGTCGGCTCGCTGGCAGCTC
Product: putative N-Acetyl-1-D-myo-Inosityl-2-amino-2-deoxy-alpha-D- glucopyranoside deacetylase MshB
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTTRRLMLVHAHPDDESLTTGGTIARYAAEGADVQLVTCTLGEEGEVIGDRWAQLAVDQADQLGGYRIGELSTALRHLGV DGPTFLGGAGRWRDSGMADTTPLHPRAFAGADLNEAVGALTALIDEHRPHVVVTYDPFGGYGHPDHIQAHTVTTAAVEKA SWQVAKLYWTVIATSALETGLASITQLPPGCQPAPLDLIPTFADEKISAAIDVSGHREAKVAALRAHATQLTVSDDGSSM ALSNLIALPIADIEHFVLVRGEPGVDTGWESDLFAGVEL
Sequences:
>Translated_279_residues MTTRRLMLVHAHPDDESLTTGGTIARYAAEGADVQLVTCTLGEEGEVIGDRWAQLAVDQADQLGGYRIGELSTALRHLGV DGPTFLGGAGRWRDSGMADTTPLHPRAFAGADLNEAVGALTALIDEHRPHVVVTYDPFGGYGHPDHIQAHTVTTAAVEKA SWQVAKLYWTVIATSALETGLASITQLPPGCQPAPLDLIPTFADEKISAAIDVSGHREAKVAALRAHATQLTVSDDGSSM ALSNLIALPIADIEHFVLVRGEPGVDTGWESDLFAGVEL >Mature_278_residues TTRRLMLVHAHPDDESLTTGGTIARYAAEGADVQLVTCTLGEEGEVIGDRWAQLAVDQADQLGGYRIGELSTALRHLGVD GPTFLGGAGRWRDSGMADTTPLHPRAFAGADLNEAVGALTALIDEHRPHVVVTYDPFGGYGHPDHIQAHTVTTAAVEKAS WQVAKLYWTVIATSALETGLASITQLPPGCQPAPLDLIPTFADEKISAAIDVSGHREAKVAALRAHATQLTVSDDGSSMA LSNLIALPIADIEHFVLVRGEPGVDTGWESDLFAGVEL
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSHB_MYCA9 (B1MLH7)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001702058.1 - ProteinModelPortal: B1MLH7 - SMR: B1MLH7 - EnsemblBacteria: EBMYCT00000004125 - GeneID: 5963840 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_1316 - GeneTree: EBGT00050000016794 - HOGENOM: HBG666753 - OMA: KFYWTVT - BioCyc: MABS561007:MAB_1316-MONOMER - HAMAP: MF_01696 - InterPro: IPR003737 - InterPro: IPR017810 - PANTHER: PTHR12993 - TIGRFAMs: TIGR03445
Pfam domain/function: PF02585 PIG-L
EC number: =3.5.1.103
Molecular weight: Translated: 29483; Mature: 29352
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRRLMLVHAHPDDESLTTGGTIARYAAEGADVQLVTCTLGEEGEVIGDRWAQLAVDQA CCCCEEEEEEECCCCCCCCCCCCCEEHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH DQLGGYRIGELSTALRHLGVDGPTFLGGAGRWRDSGMADTTPLHPRAFAGADLNEAVGAL HHCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TALIDEHRPHVVVTYDPFGGYGHPDHIQAHTVTTAAVEKASWQVAKLYWTVIATSALETG HHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHH LASITQLPPGCQPAPLDLIPTFADEKISAAIDVSGHREAKVAALRAHATQLTVSDDGSSM HHHHHCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHEEEEEEEEEEECCCCCHH ALSNLIALPIADIEHFVLVRGEPGVDTGWESDLFAGVEL HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEECCC >Mature Secondary Structure TTRRLMLVHAHPDDESLTTGGTIARYAAEGADVQLVTCTLGEEGEVIGDRWAQLAVDQA CCCEEEEEEECCCCCCCCCCCCCEEHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH DQLGGYRIGELSTALRHLGVDGPTFLGGAGRWRDSGMADTTPLHPRAFAGADLNEAVGAL HHCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TALIDEHRPHVVVTYDPFGGYGHPDHIQAHTVTTAAVEKASWQVAKLYWTVIATSALETG HHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHH LASITQLPPGCQPAPLDLIPTFADEKISAAIDVSGHREAKVAALRAHATQLTVSDDGSSM HHHHHCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCHHHHEEEEEEEEEEECCCCCHH ALSNLIALPIADIEHFVLVRGEPGVDTGWESDLFAGVEL HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA