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The map label for this gene is lpqW [H]

Identifier: 169628408

GI number: 169628408

Start: 1315857

End: 1317659

Strand: Direct

Name: lpqW [H]

Synonym: MAB_1315

Alternate gene names: 169628408

Gene position: 1315857-1317659 (Clockwise)

Preceding gene: 169628407

Following gene: 169628409

Centisome position: 25.97

GC content: 68.16

Gene sequence:

>1803_bases
ATGCCGACCGACTCACCGCGCCTGCGACTGTGTGCAGTGCTCGGTGTGGTGCTCCTCGCCGGGTGCTCTGTCAGCGCACC
TCCGGCCGTGCAGGGCAGCGAGACAACAAGCTCGACCACACCGCCACCACCCAAGAAAGAGCAGATTGTGGTGGGCATCG
ACTCGATCGGAGCGGGCTTCAACCCGCATCTGTTGTCCGATCAGTCGCCGGTGAACTCCGCGATCAGTGCGCTGGTGCTG
CCCAGCGCGTTCCGTCCGGTGCCCGATTCGGCGACCACCACCGGCTCGCGCTGGGAGATGGACCCGACACTGCTGGTCTC
GGCCGAGGAAACCAGCCAGGAACCGTTCACGGTCACCTACACGATCCGTCCCGAGGCACAGTGGACCGATAACGCACCCA
TCGGCGCCGATGATTTCTCCTACCTGTGGCAGCAGATGCTCACCCAGCCCGGGACCGTCGACCCGGCGGGCTACGGAAAC
ATCACCGACGTGCAGTCGCGTGACGGTGGCAAGCGCGTGGTCGTCACCTTCGACCATAAGTACCCGGCATGGCGCGAGCT
GTTCAATGACCTGCTGCCCGCGCACATCGTGAAGGACATCCCGGGCGGGTTCGCCTCCGGGCTGGTCAAGTCGATGCCCG
CCTCCGGGGGGCGTTTCCGCGTCGACACCATCGACCCGCAGCGTGACGAGATCCTGCTGGCGCGTAATGACCGGTACTGG
GCAACCCAGGCCGTTCCCGACGAGATCCTTTTCCGTCGAGCAGGCGCCCCGACGGTGTTGGCCGATTCGATCCGCAACGG
GGACACCCAAGTGGCCCAGGTGCACGGCAGCGGGGTGACCTTCGCGCAGTTGTCCAATATCCCCGGGGTGCGCACCGCGC
GCATCGTCGCGCCGCGCACCCTGCAGCTGACGCTGCGGGCCGGGCAGCCGACTCTCACCGACGCGAAGGTGCGACGCGGA
CTGCTGGGCTTGCTCGATGTCGGGCTACTGGCGGCGGTGGCGGCAGGCAATGAAAACTCCGTCACGCTGGCGGCGGCTCA
GGTGCGCTCACCGTCGGACCCCGGGTACAAGCCCACCGCACCCGTCGCATTGACCCGGGACGCCTCGCTCGCGTTACTCA
AGGAGGCCGGGTACGAGGCCGTGGAGAACCCGGTGGTGCCCCCGGCTCCCAATGCACCCGCCGGTCCGCCGCAGATCACC
AAGGACGGGGACCCGTTGACCCTCGTCATCGGCGCGGCCTCCAACGATCCCACTTCGGTGGCCGTCGCCAACACCGCGGC
CGACCAGCTGCGCAACGCGGGAGTGCGCGCGAGCGTGCTGGCCCTCGACCCGCCCACGCTGTACGGACAGGCGATCCCGG
ACGGCCGGGTAGATGCCATCGTCGGCTGGCACCAGGCCGGCGGAGACCTGGCCACCGCACTCGCCTCTCGGTATGGCTGC
CCGGCGCTGCAAGCGGGGAGGCTGCCCGACACTCGCACCACGACGCCGCCACCGCCGCCGGCCAGTAATACACCCGCGCC
GCCGTCGCGAGAGGATTCTGTTCGCGCCCCGAGCAATCTGACCGGGCTGTGTGATGAGGAATTGCAGGCCAGCATCGACG
CCGCGCTGACGGGTCATGCCGATGTGGGCAAGGTCGTCGATCAGGCCGAGCCGCAATTATGGAAGATGGCAACGGTGCTG
CCGATCATGCAGGACACCACCATCGCCGCGGCCGGTCCCAGCGTGCAGAACGTGGAGCTGGCCGGTGCGGTGCCGGTCGG
GATTGTGGCCACGGCAGGAGAGTGGAAGAAGACCCGCCCATGA

Upstream 100 bases:

>100_bases
GCGCATACAGTCGTACCGGCGGTATCCGGCAGCGGCTCCGGGTGTAGCTGGCCCTTGTTGACATCCGACTCACAGCACCC
CACCGATAAGGTTGTTCCTC

Downstream 100 bases:

>100_bases
CGACTCGACGACTCATGCTGGTGCACGCACACCCCGATGACGAATCTCTGACCACCGGGGGAACCATTGCGCGGTACGCC
GCCGAAGGCGCCGATGTCCA

Product: putative lipoprotein LpqW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MPTDSPRLRLCAVLGVVLLAGCSVSAPPAVQGSETTSSTTPPPPKKEQIVVGIDSIGAGFNPHLLSDQSPVNSAISALVL
PSAFRPVPDSATTTGSRWEMDPTLLVSAEETSQEPFTVTYTIRPEAQWTDNAPIGADDFSYLWQQMLTQPGTVDPAGYGN
ITDVQSRDGGKRVVVTFDHKYPAWRELFNDLLPAHIVKDIPGGFASGLVKSMPASGGRFRVDTIDPQRDEILLARNDRYW
ATQAVPDEILFRRAGAPTVLADSIRNGDTQVAQVHGSGVTFAQLSNIPGVRTARIVAPRTLQLTLRAGQPTLTDAKVRRG
LLGLLDVGLLAAVAAGNENSVTLAAAQVRSPSDPGYKPTAPVALTRDASLALLKEAGYEAVENPVVPPAPNAPAGPPQIT
KDGDPLTLVIGAASNDPTSVAVANTAADQLRNAGVRASVLALDPPTLYGQAIPDGRVDAIVGWHQAGGDLATALASRYGC
PALQAGRLPDTRTTTPPPPPASNTPAPPSREDSVRAPSNLTGLCDEELQASIDAALTGHADVGKVVDQAEPQLWKMATVL
PIMQDTTIAAAGPSVQNVELAGAVPVGIVATAGEWKKTRP

Sequences:

>Translated_600_residues
MPTDSPRLRLCAVLGVVLLAGCSVSAPPAVQGSETTSSTTPPPPKKEQIVVGIDSIGAGFNPHLLSDQSPVNSAISALVL
PSAFRPVPDSATTTGSRWEMDPTLLVSAEETSQEPFTVTYTIRPEAQWTDNAPIGADDFSYLWQQMLTQPGTVDPAGYGN
ITDVQSRDGGKRVVVTFDHKYPAWRELFNDLLPAHIVKDIPGGFASGLVKSMPASGGRFRVDTIDPQRDEILLARNDRYW
ATQAVPDEILFRRAGAPTVLADSIRNGDTQVAQVHGSGVTFAQLSNIPGVRTARIVAPRTLQLTLRAGQPTLTDAKVRRG
LLGLLDVGLLAAVAAGNENSVTLAAAQVRSPSDPGYKPTAPVALTRDASLALLKEAGYEAVENPVVPPAPNAPAGPPQIT
KDGDPLTLVIGAASNDPTSVAVANTAADQLRNAGVRASVLALDPPTLYGQAIPDGRVDAIVGWHQAGGDLATALASRYGC
PALQAGRLPDTRTTTPPPPPASNTPAPPSREDSVRAPSNLTGLCDEELQASIDAALTGHADVGKVVDQAEPQLWKMATVL
PIMQDTTIAAAGPSVQNVELAGAVPVGIVATAGEWKKTRP
>Mature_599_residues
PTDSPRLRLCAVLGVVLLAGCSVSAPPAVQGSETTSSTTPPPPKKEQIVVGIDSIGAGFNPHLLSDQSPVNSAISALVLP
SAFRPVPDSATTTGSRWEMDPTLLVSAEETSQEPFTVTYTIRPEAQWTDNAPIGADDFSYLWQQMLTQPGTVDPAGYGNI
TDVQSRDGGKRVVVTFDHKYPAWRELFNDLLPAHIVKDIPGGFASGLVKSMPASGGRFRVDTIDPQRDEILLARNDRYWA
TQAVPDEILFRRAGAPTVLADSIRNGDTQVAQVHGSGVTFAQLSNIPGVRTARIVAPRTLQLTLRAGQPTLTDAKVRRGL
LGLLDVGLLAAVAAGNENSVTLAAAQVRSPSDPGYKPTAPVALTRDASLALLKEAGYEAVENPVVPPAPNAPAGPPQITK
DGDPLTLVIGAASNDPTSVAVANTAADQLRNAGVRASVLALDPPTLYGQAIPDGRVDAIVGWHQAGGDLATALASRYGCP
ALQAGRLPDTRTTTPPPPPASNTPAPPSREDSVRAPSNLTGLCDEELQASIDAALTGHADVGKVVDQAEPQLWKMATVLP
IMQDTTIAAAGPSVQNVELAGAVPVGIVATAGEWKKTRP

Specific function: May directly or indirectly regulate the accessibility of the key branch point intermediate, monoacyl phosphatidylinositol tetramannoside (AcPIM4), to the elongating alpha-1,6 mannosyltransferases which could regulate the lipoarabinomannans (LAMs) biosynth

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62627; Mature: 62496

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDSPRLRLCAVLGVVLLAGCSVSAPPAVQGSETTSSTTPPPPKKEQIVVGIDSIGAGF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
NPHLLSDQSPVNSAISALVLPSAFRPVPDSATTTGSRWEMDPTLLVSAEETSQEPFTVTY
CCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCEEEEE
TIRPEAQWTDNAPIGADDFSYLWQQMLTQPGTVDPAGYGNITDVQSRDGGKRVVVTFDHK
EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
YPAWRELFNDLLPAHIVKDIPGGFASGLVKSMPASGGRFRVDTIDPQRDEILLARNDRYW
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCEE
ATQAVPDEILFRRAGAPTVLADSIRNGDTQVAQVHGSGVTFAQLSNIPGVRTARIVAPRT
ECCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCEEHHHCCCCCCCEEEEECCCE
LQLTLRAGQPTLTDAKVRRGLLGLLDVGLLAAVAAGNENSVTLAAAQVRSPSDPGYKPTA
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC
PVALTRDASLALLKEAGYEAVENPVVPPAPNAPAGPPQITKDGDPLTLVIGAASNDPTSV
CEEEECCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE
AVANTAADQLRNAGVRASVLALDPPTLYGQAIPDGRVDAIVGWHQAGGDLATALASRYGC
EEEHHHHHHHHCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCC
PALQAGRLPDTRTTTPPPPPASNTPAPPSREDSVRAPSNLTGLCDEELQASIDAALTGHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DVGKVVDQAEPQLWKMATVLPIMQDTTIAAAGPSVQNVELAGAVPVGIVATAGEWKKTRP
HHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
PTDSPRLRLCAVLGVVLLAGCSVSAPPAVQGSETTSSTTPPPPKKEQIVVGIDSIGAGF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
NPHLLSDQSPVNSAISALVLPSAFRPVPDSATTTGSRWEMDPTLLVSAEETSQEPFTVTY
CCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCEEEEE
TIRPEAQWTDNAPIGADDFSYLWQQMLTQPGTVDPAGYGNITDVQSRDGGKRVVVTFDHK
EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
YPAWRELFNDLLPAHIVKDIPGGFASGLVKSMPASGGRFRVDTIDPQRDEILLARNDRYW
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCEE
ATQAVPDEILFRRAGAPTVLADSIRNGDTQVAQVHGSGVTFAQLSNIPGVRTARIVAPRT
ECCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCEEHHHCCCCCCCEEEEECCCE
LQLTLRAGQPTLTDAKVRRGLLGLLDVGLLAAVAAGNENSVTLAAAQVRSPSDPGYKPTA
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC
PVALTRDASLALLKEAGYEAVENPVVPPAPNAPAGPPQITKDGDPLTLVIGAASNDPTSV
CEEEECCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEE
AVANTAADQLRNAGVRASVLALDPPTLYGQAIPDGRVDAIVGWHQAGGDLATALASRYGC
EEEHHHHHHHHCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCC
PALQAGRLPDTRTTTPPPPPASNTPAPPSREDSVRAPSNLTGLCDEELQASIDAALTGHA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DVGKVVDQAEPQLWKMATVLPIMQDTTIAAAGPSVQNVELAGAVPVGIVATAGEWKKTRP
HHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]