Click here to switch to the map view.

The map label for this gene is 169628229

Identifier: 169628229

GI number: 169628229

Start: 1149587

End: 1150243

Strand: Direct

Name: 169628229

Synonym: MAB_1136

Alternate gene names: NA

Gene position: 1149587-1150243 (Clockwise)

Preceding gene: 169628224

Following gene: 169628232

Centisome position: 22.69

GC content: 64.69

Gene sequence:

>657_bases
ATGACATCCCTGAGTTTTCGGCGCGCCCGCTCCGAGGAAAACAAGCGTCAACGTGCGGCGACGATCGTGGAAGCCGCACG
TGCCTTGGCGCTGGAGTCGGGTGTCGCGTCGGTCACTCTCACGGGATTGGCCAATCGTGCGGGTGTCCACCACTCCGCCG
TGCGCCGTTACTTCAGCTCCCATAAAGAGGTGCTGCTGCGGCTGTCGACCGAGGGCATGGCGGCGCTGGCCGAGTCGGTC
TGTGCGGCGCTGGAGGGCTCGCAGGAGCGATCGCCTATCGAGGTCGGCGCCATACTTTCGGGCGCCCTGGTGGATGCGCC
ACTGTTTTGCGACCTGTTGGGCAGTCACTACGTCCACTTCGAGCATGAGGTGGTGATCGACCACGTCCGCGAGGCCCAGC
GGGTGAATCAGGCGGCCGCGATGACCATCGTCGAGGCGATCGAGCGGTCGGCACCGCAGATCGATCGCGAAGGTGCGCTC
GACATCGTCATATCGTCCTTCGCGCTCGCGGCGATGTTGTGGCAGTTCGCACATCCCCCGAAGGGGCTCGAACACGACTT
CAGTAACGAACCCGGCATTCCCGACGACTGGGACACCGACTTTGGCAGCACCCTCACCCGGCTGCTGACCGCGACGTGCA
TTGGTGCGGCCAAGTAG

Upstream 100 bases:

>100_bases
TGAAGCATTCAATTCTTAACGCATGGCATGTGCGTTATGGGCAACCTACCAGCGGGTTCATGTGCCCGCAAGTCACACGC
CGTGCGTTATCTTGGGGGAG

Downstream 100 bases:

>100_bases
CCCTGTCCGCGATTGAGACGGCAGCTATAGCGTGCTGGGCCACCAGATTTTGTTGCCGATGATCGACATTGCCGCCGGAA
CCAGGACGGTGCGCACGATG

Product: transcriptional regulator TetR

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator TetR; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTSLSFRRARSEENKRQRAATIVEAARALALESGVASVTLTGLANRAGVHHSAVRRYFSSHKEVLLRLSTEGMAALAESV
CAALEGSQERSPIEVGAILSGALVDAPLFCDLLGSHYVHFEHEVVIDHVREAQRVNQAAAMTIVEAIERSAPQIDREGAL
DIVISSFALAAMLWQFAHPPKGLEHDFSNEPGIPDDWDTDFGSTLTRLLTATCIGAAK

Sequences:

>Translated_218_residues
MTSLSFRRARSEENKRQRAATIVEAARALALESGVASVTLTGLANRAGVHHSAVRRYFSSHKEVLLRLSTEGMAALAESV
CAALEGSQERSPIEVGAILSGALVDAPLFCDLLGSHYVHFEHEVVIDHVREAQRVNQAAAMTIVEAIERSAPQIDREGAL
DIVISSFALAAMLWQFAHPPKGLEHDFSNEPGIPDDWDTDFGSTLTRLLTATCIGAAK
>Mature_217_residues
TSLSFRRARSEENKRQRAATIVEAARALALESGVASVTLTGLANRAGVHHSAVRRYFSSHKEVLLRLSTEGMAALAESVC
AALEGSQERSPIEVGAILSGALVDAPLFCDLLGSHYVHFEHEVVIDHVREAQRVNQAAAMTIVEAIERSAPQIDREGALD
IVISSFALAAMLWQFAHPPKGLEHDFSNEPGIPDDWDTDFGSTLTRLLTATCIGAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23529; Mature: 23398

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSFRRARSEENKRQRAATIVEAARALALESGVASVTLTGLANRAGVHHSAVRRYFSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
HKEVLLRLSTEGMAALAESVCAALEGSQERSPIEVGAILSGALVDAPLFCDLLGSHYVHF
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHEHH
EHEVVIDHVREAQRVNQAAAMTIVEAIERSAPQIDREGALDIVISSFALAAMLWQFAHPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
KGLEHDFSNEPGIPDDWDTDFGSTLTRLLTATCIGAAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSLSFRRARSEENKRQRAATIVEAARALALESGVASVTLTGLANRAGVHHSAVRRYFSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHH
HKEVLLRLSTEGMAALAESVCAALEGSQERSPIEVGAILSGALVDAPLFCDLLGSHYVHF
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHEHH
EHEVVIDHVREAQRVNQAAAMTIVEAIERSAPQIDREGALDIVISSFALAAMLWQFAHPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
KGLEHDFSNEPGIPDDWDTDFGSTLTRLLTATCIGAAK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA