| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628195
Identifier: 169628195
GI number: 169628195
Start: 1115383
End: 1117290
Strand: Direct
Name: 169628195
Synonym: MAB_1101
Alternate gene names: NA
Gene position: 1115383-1117290 (Clockwise)
Preceding gene: 169628192
Following gene: 169628196
Centisome position: 22.01
GC content: 58.02
Gene sequence:
>1908_bases ATGACGGGGGCACCTGCGCTGGTAGCGTCGCAAATCGAAGGGGGGACCGCGATGTTGTATGGAGCGGCCTCGGTTGAGGC CAAGAGCATGACCGTCGGTGAGGTCATGAACGAACGCTTCCCCTTCGCTGTGCCCCGATACCAGCGTTCCTACGCGTGGG GGGACGAGGCAGTCGGCTTCTTCATCCGTGATATCGAGGCGATGCTGGACCAGCCGGCAGGACAGACGAGTCACTTCTTT GGTGGAGTGGTGTGTATCCAGCTCACCGACAACCAAAAGACGCGCCCCACGAGCTACGAGGTGGTCGACGGGCAGCAGCG CTTGGCCACGTTAATGCTCGCGCTGTCCTGCGTTGTTGAGGTCGCCGAGGATCTGATTAAGCGGTGCGCCAAGAAGGATC CCCAGATAGCGGCGAGCGCCAGCACACTTCGCGATGAGATCGTCGAGAACTTCGTTACCTGGAAGGAGTCCGACGTCGCG GCCGGGATTTCCACGGTCCGCCGACGGATGACGCTCTCGCTCGCCGACGACGCTGTCTTCGAGGCTCTTGTCATGCGCAA GCGGGTACCGACGCCAGCGCGAGAGGGCCACACGCTCCTGATCGAGGCGCATGAGGCTTTGATGGCGATGACCTACCGTT TCGTCGGCACAAAGGGAACGCTCAAGGAGCGCCTTGATCGGCTTCTCCGACTGCGGCAGGCACTTCTGCAGGATGCGCAC GTGATTCATATCGTATCGAAGGAGCGCGCACAGGCGTACCGACTCTTCTCTGTACTCAACCATCGTGGCGAATCTCTATC TGATGCCGACCTCCTTCGCAGTCGGAGCTTGGAGATGCTTGAAGGATTTCTGTCCCACCAGGAGGCCGCGGCTCTGATCT GGGACGATCTGTTGTCAAATAAGGCACGAGATGTGGAACTGTTCTTCCAAGCCATCTATCCCTCTGTCACCGGCAAGCGC GCCCAGGGTGACCTGTTCGAGGCGCTGGAGAAGGCATTTCTTCCGAGCGTCGTCCCAACCTCTACGGCGGATGCCGAGCG GGTTGTTGCGCGAGTCGAGTGGTTCCGCGACGAATTCCTGCTCTACGCGAAATTAGTCGCCGGAGACTGGCCGTATCCAC GACAGCCGCCCGGGCAGCAGCGAGTGAACAGTTGGCAGATAGAGCGGCTGCGGCGACTTACCGTAACGTTGCGGCACGAT TTGGCGTTGCCACTGTTGCTGGCAGCAGCGCGGTCGCTGTCGGAGACGGACTTTGCGGCTCTGGCATACATGTTGGAGAT CTTCGCTTTTCGTTACAAGATTATCTGCGGTGCGCACGCTACGAAGCCTTCGAATCTGTACTACGAGCACGCCTATCTGA TGCGGATGGCGACTAAATCGAAGCCCTATACGCTCAAAACGCTCAAGCAGGAGTTGCGGCAGCTCATCGCCGATAAGGCG GGGGACGCACTCTTTAAGCAATTGTTGTTAGAGAAGTTGCGGTATTCCAACTCCAGTCAGCGGGTCAACATCCGGGAGTT CCTAACTGTTCTAGAGGAACATCGAGCGTGGTTGGCGAAGCCGGCATCCAAGCAGGGTGTGGCCGCACCAAGGCCTTCGA TGACCAAGGTCATCGACATTGACGAAGCGACGATCGAGCACATCTATCCACAGGGCGCTTCCACGACCGACAAGGATGCC GCACTGGAGCAGAAGAAGCACTGGCTCGCTAATCTGACGTTCTTCGGTCCAAAGGACAACTCTGACACCGGCAATAAGCC CTTCTCGGTCAAGCGAACCACAAGCTATCCTGCCAGTGAGATTGCGATGACGGCAGATCTAGCGAAACTAAATTCCTGGA CGGATGTGGAGTTTGACGACCGTGAGAAGAATCTACTTGACCTGGCTATCCTTGTGTTTGTAATTTGA
Upstream 100 bases:
>100_bases TCCGGGGTCGTTCCCAGTCGGCGGCGGCATGGCCTGATCCTAGGTCGTGGCTTGTCGCCGAGGTGACGCATATCCACGGG CCAAACTGTCGTGTCTTCCC
Downstream 100 bases:
>100_bases GTAAGCGGCCATTTTTGCAAGACGACATCAAACATACTGGCGTCAAGCAATTGCGCGGCACAGTGCAAGCGATATCTGTC GTTGACGGAAGTAGAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MTGAPALVASQIEGGTAMLYGAASVEAKSMTVGEVMNERFPFAVPRYQRSYAWGDEAVGFFIRDIEAMLDQPAGQTSHFF GGVVCIQLTDNQKTRPTSYEVVDGQQRLATLMLALSCVVEVAEDLIKRCAKKDPQIAASASTLRDEIVENFVTWKESDVA AGISTVRRRMTLSLADDAVFEALVMRKRVPTPAREGHTLLIEAHEALMAMTYRFVGTKGTLKERLDRLLRLRQALLQDAH VIHIVSKERAQAYRLFSVLNHRGESLSDADLLRSRSLEMLEGFLSHQEAAALIWDDLLSNKARDVELFFQAIYPSVTGKR AQGDLFEALEKAFLPSVVPTSTADAERVVARVEWFRDEFLLYAKLVAGDWPYPRQPPGQQRVNSWQIERLRRLTVTLRHD LALPLLLAAARSLSETDFAALAYMLEIFAFRYKIICGAHATKPSNLYYEHAYLMRMATKSKPYTLKTLKQELRQLIADKA GDALFKQLLLEKLRYSNSSQRVNIREFLTVLEEHRAWLAKPASKQGVAAPRPSMTKVIDIDEATIEHIYPQGASTTDKDA ALEQKKHWLANLTFFGPKDNSDTGNKPFSVKRTTSYPASEIAMTADLAKLNSWTDVEFDDREKNLLDLAILVFVI
Sequences:
>Translated_635_residues MTGAPALVASQIEGGTAMLYGAASVEAKSMTVGEVMNERFPFAVPRYQRSYAWGDEAVGFFIRDIEAMLDQPAGQTSHFF GGVVCIQLTDNQKTRPTSYEVVDGQQRLATLMLALSCVVEVAEDLIKRCAKKDPQIAASASTLRDEIVENFVTWKESDVA AGISTVRRRMTLSLADDAVFEALVMRKRVPTPAREGHTLLIEAHEALMAMTYRFVGTKGTLKERLDRLLRLRQALLQDAH VIHIVSKERAQAYRLFSVLNHRGESLSDADLLRSRSLEMLEGFLSHQEAAALIWDDLLSNKARDVELFFQAIYPSVTGKR AQGDLFEALEKAFLPSVVPTSTADAERVVARVEWFRDEFLLYAKLVAGDWPYPRQPPGQQRVNSWQIERLRRLTVTLRHD LALPLLLAAARSLSETDFAALAYMLEIFAFRYKIICGAHATKPSNLYYEHAYLMRMATKSKPYTLKTLKQELRQLIADKA GDALFKQLLLEKLRYSNSSQRVNIREFLTVLEEHRAWLAKPASKQGVAAPRPSMTKVIDIDEATIEHIYPQGASTTDKDA ALEQKKHWLANLTFFGPKDNSDTGNKPFSVKRTTSYPASEIAMTADLAKLNSWTDVEFDDREKNLLDLAILVFVI >Mature_634_residues TGAPALVASQIEGGTAMLYGAASVEAKSMTVGEVMNERFPFAVPRYQRSYAWGDEAVGFFIRDIEAMLDQPAGQTSHFFG GVVCIQLTDNQKTRPTSYEVVDGQQRLATLMLALSCVVEVAEDLIKRCAKKDPQIAASASTLRDEIVENFVTWKESDVAA GISTVRRRMTLSLADDAVFEALVMRKRVPTPAREGHTLLIEAHEALMAMTYRFVGTKGTLKERLDRLLRLRQALLQDAHV IHIVSKERAQAYRLFSVLNHRGESLSDADLLRSRSLEMLEGFLSHQEAAALIWDDLLSNKARDVELFFQAIYPSVTGKRA QGDLFEALEKAFLPSVVPTSTADAERVVARVEWFRDEFLLYAKLVAGDWPYPRQPPGQQRVNSWQIERLRRLTVTLRHDL ALPLLLAAARSLSETDFAALAYMLEIFAFRYKIICGAHATKPSNLYYEHAYLMRMATKSKPYTLKTLKQELRQLIADKAG DALFKQLLLEKLRYSNSSQRVNIREFLTVLEEHRAWLAKPASKQGVAAPRPSMTKVIDIDEATIEHIYPQGASTTDKDAA LEQKKHWLANLTFFGPKDNSDTGNKPFSVKRTTSYPASEIAMTADLAKLNSWTDVEFDDREKNLLDLAILVFVI
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71383; Mature: 71252
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAPALVASQIEGGTAMLYGAASVEAKSMTVGEVMNERFPFAVPRYQRSYAWGDEAVGF CCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHH FIRDIEAMLDQPAGQTSHFFGGVVCIQLTDNQKTRPTSYEVVDGQQRLATLMLALSCVVE HHHHHHHHHCCCCCCCCHHCCCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH VAEDLIKRCAKKDPQIAASASTLRDEIVENFVTWKESDVAAGISTVRRRMTLSLADDAVF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EALVMRKRVPTPAREGHTLLIEAHEALMAMTYRFVGTKGTLKERLDRLLRLRQALLQDAH HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC VIHIVSKERAQAYRLFSVLNHRGESLSDADLLRSRSLEMLEGFLSHQEAAALIWDDLLSN EEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC KARDVELFFQAIYPSVTGKRAQGDLFEALEKAFLPSVVPTSTADAERVVARVEWFRDEFL CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LYAKLVAGDWPYPRQPPGQQRVNSWQIERLRRLTVTLRHDLALPLLLAAARSLSETDFAA HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LAYMLEIFAFRYKIICGAHATKPSNLYYEHAYLMRMATKSKPYTLKTLKQELRQLIADKA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GDALFKQLLLEKLRYSNSSQRVNIREFLTVLEEHRAWLAKPASKQGVAAPRPSMTKVIDI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC DEATIEHIYPQGASTTDKDAALEQKKHWLANLTFFGPKDNSDTGNKPFSVKRTTSYPASE CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCHHH IAMTADLAKLNSWTDVEFDDREKNLLDLAILVFVI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure TGAPALVASQIEGGTAMLYGAASVEAKSMTVGEVMNERFPFAVPRYQRSYAWGDEAVGF CCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHH FIRDIEAMLDQPAGQTSHFFGGVVCIQLTDNQKTRPTSYEVVDGQQRLATLMLALSCVVE HHHHHHHHHCCCCCCCCHHCCCEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHH VAEDLIKRCAKKDPQIAASASTLRDEIVENFVTWKESDVAAGISTVRRRMTLSLADDAVF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EALVMRKRVPTPAREGHTLLIEAHEALMAMTYRFVGTKGTLKERLDRLLRLRQALLQDAH HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC VIHIVSKERAQAYRLFSVLNHRGESLSDADLLRSRSLEMLEGFLSHQEAAALIWDDLLSN EEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC KARDVELFFQAIYPSVTGKRAQGDLFEALEKAFLPSVVPTSTADAERVVARVEWFRDEFL CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LYAKLVAGDWPYPRQPPGQQRVNSWQIERLRRLTVTLRHDLALPLLLAAARSLSETDFAA HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LAYMLEIFAFRYKIICGAHATKPSNLYYEHAYLMRMATKSKPYTLKTLKQELRQLIADKA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GDALFKQLLLEKLRYSNSSQRVNIREFLTVLEEHRAWLAKPASKQGVAAPRPSMTKVIDI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC DEATIEHIYPQGASTTDKDAALEQKKHWLANLTFFGPKDNSDTGNKPFSVKRTTSYPASE CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCHHH IAMTADLAKLNSWTDVEFDDREKNLLDLAILVFVI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA