| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628192
Identifier: 169628192
GI number: 169628192
Start: 1110842
End: 1112314
Strand: Direct
Name: 169628192
Synonym: MAB_1098
Alternate gene names: NA
Gene position: 1110842-1112314 (Clockwise)
Preceding gene: 169628191
Following gene: 169628195
Centisome position: 21.92
GC content: 59.54
Gene sequence:
>1473_bases ATGACCGAGCAGGTCGCGCGGCATCGAACGGCGATGACGCGTGCAGCGCTTTCCCGCCCGGTGGCGCTGGCGATATCTGA CGGTGTACTGAATAGCTCCCTGTCCGTCTTCGACTACGGATGTGGGCGCGGCGACGATCTGCGGAACCTGACCGCTTTGG GATTTCAGACCGACGGGTGGGACCCGAGTCACCGGCCGGAGGCTGCGCTACGTCCTGCCGATATCGTCAACATCGGGTAC GTGGTCAATGTCATCGATGACCGTGCCGAGCGTCGAGAGACGTTGCAGCGCGCATGGAATCTCGCCAAGCAAGTGCTGGT TGTGTCTGCGCGGCTGGTGTGGGAAGCGCGCGATCTTGAAGGCCGTCCCTATGCCGACGGCCTTGTAACCCGTACGGGAA CCTTCCAAAAGTTCTATGAACAAGCAGAACTGGCGGCCTGGATCGAGGAGTCTCTAGGCGTGAAGCCCGTCGCGGCCGCA CCCGGCATTTTCTATGTTTTCCGGGATGCGGCGCGTGCTCACGAGTTTCTTGCAACACGGGCATATACGTACCGCCCGCG GATGCGCGCCGACCCGCACGCGGTGTACGAAACGCACAAGCAAACCCTCGCACCTCTGCTGGATTTTCTCAGTATGCATG CACGTAGTCCACGCAGCGGAGAACTCGAAGAATCAGCCGAGGTTCAGATCCGGGACCAATTCTCGTCAATTGCCAGTGCT ACCAACTTGATTCGACAAGTTACCGATGATGACTACTGGGATGACGTTAGATTGCAGCGACGTCAGGAGATGCTCGTCTA TATCGCGATGTCTCGGTTCGGGCGACGCCCGAGGTTCAGTGAACTCGCGAAAACGCTTGCCGCAGATATCAAGACACACC TCGGCAAGTACAGTGATGCCTGTCTCCAGGCCGACCGTCTTCTCCTTGCCACGGGTGATCCCGCGATCGTGCTCGTATCG GCGCGAAGTAGCAGCGTAGGCAAGCAGACGCCTTCCGCTCTGTACGTTCATCGCTCTGCGCTTGGCCATTTGCCACCGGT ACTACGTGTGTATGAGGCCTGCGGGCGGGTTCTTGCTGGCACCGTCGAGCATGCCAACATGGTGAAGCTGTCAGTAAAGG AGCCGCAGGTCTCATACCTGACTTATCCTGACTTTGACCGTGATCCGCATCCGACCCTGCGGTCGGCTGTCACGGTGAAT CTCCGGAGACTCAGCGTGGACTGGCGCGACTACAGCCGGTCAGAGAACCCCCCCTTGCTCCACCGCAAGGAGGAGTTCGT CGGTCCGGATCATCCGAAGCGCTCTCTCTATGAACGCTTGACGCGCGCGGAAGTGAATGCCGGGCTGTATGCGCACCCGG AGCGGATCGGAACACTTATAGGTTGGCAGTCCACGATGCACGCTGCGGGAGTGTCAGTTCGTGGGCATCGACTTGTGCTT AGACAAGCGCTAAGCGGAACTGACGCGAAGTGA
Upstream 100 bases:
>100_bases GTCTCCATCTTCATCGCGGGATTGGCTATCTGGTTGGTGATCCGCGTGTCACTAACATTGCGGGACTTGCCTCTCTTGTA CTGGAACAGCCGCCAGCGGC
Downstream 100 bases:
>100_bases CGCGACAGCACTTGCTTCAGGAATGGAAATCTACCAATTCAGCTCGATTCCGGTCCAATTAGGTCTTCGAGCTCAACCGA TTCTTCCGTTTCATCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTEQVARHRTAMTRAALSRPVALAISDGVLNSSLSVFDYGCGRGDDLRNLTALGFQTDGWDPSHRPEAALRPADIVNIGY VVNVIDDRAERRETLQRAWNLAKQVLVVSARLVWEARDLEGRPYADGLVTRTGTFQKFYEQAELAAWIEESLGVKPVAAA PGIFYVFRDAARAHEFLATRAYTYRPRMRADPHAVYETHKQTLAPLLDFLSMHARSPRSGELEESAEVQIRDQFSSIASA TNLIRQVTDDDYWDDVRLQRRQEMLVYIAMSRFGRRPRFSELAKTLAADIKTHLGKYSDACLQADRLLLATGDPAIVLVS ARSSSVGKQTPSALYVHRSALGHLPPVLRVYEACGRVLAGTVEHANMVKLSVKEPQVSYLTYPDFDRDPHPTLRSAVTVN LRRLSVDWRDYSRSENPPLLHRKEEFVGPDHPKRSLYERLTRAEVNAGLYAHPERIGTLIGWQSTMHAAGVSVRGHRLVL RQALSGTDAK
Sequences:
>Translated_490_residues MTEQVARHRTAMTRAALSRPVALAISDGVLNSSLSVFDYGCGRGDDLRNLTALGFQTDGWDPSHRPEAALRPADIVNIGY VVNVIDDRAERRETLQRAWNLAKQVLVVSARLVWEARDLEGRPYADGLVTRTGTFQKFYEQAELAAWIEESLGVKPVAAA PGIFYVFRDAARAHEFLATRAYTYRPRMRADPHAVYETHKQTLAPLLDFLSMHARSPRSGELEESAEVQIRDQFSSIASA TNLIRQVTDDDYWDDVRLQRRQEMLVYIAMSRFGRRPRFSELAKTLAADIKTHLGKYSDACLQADRLLLATGDPAIVLVS ARSSSVGKQTPSALYVHRSALGHLPPVLRVYEACGRVLAGTVEHANMVKLSVKEPQVSYLTYPDFDRDPHPTLRSAVTVN LRRLSVDWRDYSRSENPPLLHRKEEFVGPDHPKRSLYERLTRAEVNAGLYAHPERIGTLIGWQSTMHAAGVSVRGHRLVL RQALSGTDAK >Mature_489_residues TEQVARHRTAMTRAALSRPVALAISDGVLNSSLSVFDYGCGRGDDLRNLTALGFQTDGWDPSHRPEAALRPADIVNIGYV VNVIDDRAERRETLQRAWNLAKQVLVVSARLVWEARDLEGRPYADGLVTRTGTFQKFYEQAELAAWIEESLGVKPVAAAP GIFYVFRDAARAHEFLATRAYTYRPRMRADPHAVYETHKQTLAPLLDFLSMHARSPRSGELEESAEVQIRDQFSSIASAT NLIRQVTDDDYWDDVRLQRRQEMLVYIAMSRFGRRPRFSELAKTLAADIKTHLGKYSDACLQADRLLLATGDPAIVLVSA RSSSVGKQTPSALYVHRSALGHLPPVLRVYEACGRVLAGTVEHANMVKLSVKEPQVSYLTYPDFDRDPHPTLRSAVTVNL RRLSVDWRDYSRSENPPLLHRKEEFVGPDHPKRSLYERLTRAEVNAGLYAHPERIGTLIGWQSTMHAAGVSVRGHRLVLR QALSGTDAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54960; Mature: 54829
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQVARHRTAMTRAALSRPVALAISDGVLNSSLSVFDYGCGRGDDLRNLTALGFQTDGW CCHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCHHEECCCCCCCCCCCCEEECCCCCCC DPSHRPEAALRPADIVNIGYVVNVIDDRAERRETLQRAWNLAKQVLVVSARLVWEARDLE CCCCCCCCCCCCCCEEEHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC GRPYADGLVTRTGTFQKFYEQAELAAWIEESLGVKPVAAAPGIFYVFRDAARAHEFLATR CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AYTYRPRMRADPHAVYETHKQTLAPLLDFLSMHARSPRSGELEESAEVQIRDQFSSIASA HHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH TNLIRQVTDDDYWDDVRLQRRQEMLVYIAMSRFGRRPRFSELAKTLAADIKTHLGKYSDA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHH CLQADRLLLATGDPAIVLVSARSSSVGKQTPSALYVHRSALGHLPPVLRVYEACGRVLAG HHHHCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TVEHANMVKLSVKEPQVSYLTYPDFDRDPHPTLRSAVTVNLRRLSVDWRDYSRSENPPLL HHCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHEEEEEEEEECHHHCCCCCCCCCC HRKEEFVGPDHPKRSLYERLTRAEVNAGLYAHPERIGTLIGWQSTMHAAGVSVRGHRLVL CCHHHCCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCHHHHHHCCCCCCCHHHHH RQALSGTDAK HHHHCCCCCC >Mature Secondary Structure TEQVARHRTAMTRAALSRPVALAISDGVLNSSLSVFDYGCGRGDDLRNLTALGFQTDGW CHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCHHEECCCCCCCCCCCCEEECCCCCCC DPSHRPEAALRPADIVNIGYVVNVIDDRAERRETLQRAWNLAKQVLVVSARLVWEARDLE CCCCCCCCCCCCCCEEEHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC GRPYADGLVTRTGTFQKFYEQAELAAWIEESLGVKPVAAAPGIFYVFRDAARAHEFLATR CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AYTYRPRMRADPHAVYETHKQTLAPLLDFLSMHARSPRSGELEESAEVQIRDQFSSIASA HHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH TNLIRQVTDDDYWDDVRLQRRQEMLVYIAMSRFGRRPRFSELAKTLAADIKTHLGKYSDA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHH CLQADRLLLATGDPAIVLVSARSSSVGKQTPSALYVHRSALGHLPPVLRVYEACGRVLAG HHHHCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TVEHANMVKLSVKEPQVSYLTYPDFDRDPHPTLRSAVTVNLRRLSVDWRDYSRSENPPLL HHCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHEEEEEEEEECHHHCCCCCCCCCC HRKEEFVGPDHPKRSLYERLTRAEVNAGLYAHPERIGTLIGWQSTMHAAGVSVRGHRLVL CCHHHCCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCHHHHHHCCCCCCCHHHHH RQALSGTDAK HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA