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The map label for this gene is yebA [H]

Identifier: 169628150

GI number: 169628150

Start: 1064245

End: 1065216

Strand: Reverse

Name: yebA [H]

Synonym: MAB_1055c

Alternate gene names: 169628150

Gene position: 1065216-1064245 (Counterclockwise)

Preceding gene: 169628154

Following gene: 169628148

Centisome position: 21.02

GC content: 68.31

Gene sequence:

>972_bases
GTGCCGATCGACGAGTTCGGCCTGAGTGACGCGCTGGAACGCCCCGAACTTGAGGACTACGACGTCTACGAAGACGCCCC
GGAAGAGGGCGCCGAGATCGAGGACCAGACCGCTCTGGATCAGCTGGAGCAGGACTGGGAAGAAGACACCGACGAAGCCG
ACCGGATCCGCGCCTCTATCGAGGCCACCGCTGACTGGTTCGCCGCCTCTGCCGCACGCACCCGGGACCCTCGCGACACC
CCCACCGACAAACTGCCCAGGATCAGCAGCGGGGGCGTACACCGTCGCCGTGAAATCGGGCAGGTAGGCAAGACACGCCT
CGCGCTGGCTGCCATGGCCGCCGGTGCTGCCGCCGCGGCCGGATACAACGCGTTGAGCGAGCACGACGCCGCGACGGCCG
CCGATCACCACGGCCTGGCTTTGGGTAACTCCGCTGCGGTGATGGCCACCCACGGCCCGCAGTTGGTCTCCGCGCCTCTC
GCGACCGATGCGTCGGTAACCGATGAGCAGCTGGCGAAGGCCACCGCATTCGCGACCGAGCGTGCCGACCGCGAGAAGCG
GCTACTGGCTCCCCGGTTCGTGATGCCCACCAACGGCACCTTCACCTCCGGCTTCGGCTACCGGTGGGGCGCGCTGCACG
GTGGCATCGACATCGCCAACAGCATCGGCACCCCGATCGTGGCCGCCGCCGACGGCGTCGTCATCGCGACGGGCCCGACC
GCCGGCTACGGCGCCTGGGTCAAGATCCGCCACTCCGACGGCACCGTGACCCTCTACGGCCACATCAATACCTGGGAAGT
CTCGGTGGGCCAGCGGGTGATGGCGGGCGATCGCATCGCCACCATCGGTAACCGCGGTAACTCCACCGGTCCGCACCTGC
ACTTCGAAGTGCTGTTGGGTGGCTCGCAGCGCATCGACCCGCAGGGTTGGCTGGCCAACAAGGGCCTCACCTTCACTCGC
TTCGGCGACTGA

Upstream 100 bases:

>100_bases
CGTCGAACGGAAGACTGGCAGGGTTTTGACACAGCATCGAGCGATACGCACGCGTGGTGGCCGAGGCGCGGAACTAAGCG
AGAACGAGATCACCAACATC

Downstream 100 bases:

>100_bases
TCACAGCTTCCAAGGCCGGGTGTGAGCAACGTTGCTCACACCCGGCCTTTTTTGCCCTGCCGTGCCATCACAGCGGGCCC
GCATGGCTCGGCTGGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPIDEFGLSDALERPELEDYDVYEDAPEEGAEIEDQTALDQLEQDWEEDTDEADRIRASIEATADWFAASAARTRDPRDT
PTDKLPRISSGGVHRRREIGQVGKTRLALAAMAAGAAAAAGYNALSEHDAATAADHHGLALGNSAAVMATHGPQLVSAPL
ATDASVTDEQLAKATAFATERADREKRLLAPRFVMPTNGTFTSGFGYRWGALHGGIDIANSIGTPIVAAADGVVIATGPT
AGYGAWVKIRHSDGTVTLYGHINTWEVSVGQRVMAGDRIATIGNRGNSTGPHLHFEVLLGGSQRIDPQGWLANKGLTFTR
FGD

Sequences:

>Translated_323_residues
MPIDEFGLSDALERPELEDYDVYEDAPEEGAEIEDQTALDQLEQDWEEDTDEADRIRASIEATADWFAASAARTRDPRDT
PTDKLPRISSGGVHRRREIGQVGKTRLALAAMAAGAAAAAGYNALSEHDAATAADHHGLALGNSAAVMATHGPQLVSAPL
ATDASVTDEQLAKATAFATERADREKRLLAPRFVMPTNGTFTSGFGYRWGALHGGIDIANSIGTPIVAAADGVVIATGPT
AGYGAWVKIRHSDGTVTLYGHINTWEVSVGQRVMAGDRIATIGNRGNSTGPHLHFEVLLGGSQRIDPQGWLANKGLTFTR
FGD
>Mature_322_residues
PIDEFGLSDALERPELEDYDVYEDAPEEGAEIEDQTALDQLEQDWEEDTDEADRIRASIEATADWFAASAARTRDPRDTP
TDKLPRISSGGVHRRREIGQVGKTRLALAAMAAGAAAAAGYNALSEHDAATAADHHGLALGNSAAVMATHGPQLVSAPLA
TDASVTDEQLAKATAFATERADREKRLLAPRFVMPTNGTFTSGFGYRWGALHGGIDIANSIGTPIVAAADGVVIATGPTA
GYGAWVKIRHSDGTVTLYGHINTWEVSVGQRVMAGDRIATIGNRGNSTGPHLHFEVLLGGSQRIDPQGWLANKGLTFTRF
GD

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=131, Percent_Identity=37.4045801526718, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082297, Length=104, Percent_Identity=41.3461538461538, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=40, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082174, Length=102, Percent_Identity=40.1960784313725, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34300; Mature: 34169

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDEFGLSDALERPELEDYDVYEDAPEEGAEIEDQTALDQLEQDWEEDTDEADRIRASI
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
EATADWFAASAARTRDPRDTPTDKLPRISSGGVHRRREIGQVGKTRLALAAMAAGAAAAA
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYNALSEHDAATAADHHGLALGNSAAVMATHGPQLVSAPLATDASVTDEQLAKATAFATE
CCHHHHHCCCHHHCCCCCEEECCCEEEEEECCCHHEECCCCCCCCCCHHHHHHHHHHHHH
RADREKRLLAPRFVMPTNGTFTSGFGYRWGALHGGIDIANSIGTPIVAAADGVVIATGPT
HHHHHHHHCCCEEEECCCCCEECCCCCCCCHHCCCCHHHHHCCCCEEEECCCEEEECCCC
AGYGAWVKIRHSDGTVTLYGHINTWEVSVGQRVMAGDRIATIGNRGNSTGPHLHFEVLLG
CCCCEEEEEEECCCEEEEEEECEEEEECCCCEECCCCEEEEECCCCCCCCCEEEEEEEEC
GSQRIDPQGWLANKGLTFTRFGD
CCCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
PIDEFGLSDALERPELEDYDVYEDAPEEGAEIEDQTALDQLEQDWEEDTDEADRIRASI
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
EATADWFAASAARTRDPRDTPTDKLPRISSGGVHRRREIGQVGKTRLALAAMAAGAAAAA
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYNALSEHDAATAADHHGLALGNSAAVMATHGPQLVSAPLATDASVTDEQLAKATAFATE
CCHHHHHCCCHHHCCCCCEEECCCEEEEEECCCHHEECCCCCCCCCCHHHHHHHHHHHHH
RADREKRLLAPRFVMPTNGTFTSGFGYRWGALHGGIDIANSIGTPIVAAADGVVIATGPT
HHHHHHHHCCCEEEECCCCCEECCCCCCCCHHCCCCHHHHHCCCCEEEECCCEEEECCCC
AGYGAWVKIRHSDGTVTLYGHINTWEVSVGQRVMAGDRIATIGNRGNSTGPHLHFEVLLG
CCCCEEEEEEECCCEEEEEEECEEEEECCCCEECCCCEEEEECCCCCCCCCEEEEEEEEC
GSQRIDPQGWLANKGLTFTRFGD
CCCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]