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The map label for this gene is yrbE [C]

Identifier: 169628107

GI number: 169628107

Start: 1018859

End: 1019716

Strand: Reverse

Name: yrbE [C]

Synonym: MAB_1012c

Alternate gene names: 169628107

Gene position: 1019716-1018859 (Counterclockwise)

Preceding gene: 169628109

Following gene: 169628106

Centisome position: 20.12

GC content: 64.8

Gene sequence:

>858_bases
ATGACGACACAAGACGAACGCCGCGCTACCAATGATGGCGTCGCGGCGATCCAGGACTGGACCACCGGGTACGTCAAACG
TCACCCTCTGGAATCACTCAAGACAGTCGGCGAGCAGTTCATGCTCGGCGTGCGCACCATCCAATGGTTCTTCGTCGATC
TGTTCACCGGAAACTTCCAGTGGCAGGAATTCGTGCGGCAGGGCGCCTTCCAGGCAGGCACTGCCGTCGTCCCGGTCATT
CTGGTCACGCTGCCCATCGGCGTCACACTCTCGATCCAGTTCGCCCTGCTTGCGGGCCAGGTCGGTGCGACCTCGCTGGC
AGGCGCCGCCAGTGGCATCGCCATCATCAGGCAGGCCGCCTCCCTGGTGGCCGCCCTGCTCATGTCGGCCGCTGTGGGTT
CGGCCATCACCGCCGACCTCGGCTCACGCACCATGCGGGAAGAGACGGACGCCATGGAGGTCATGGGCGTCTCGGTGATC
CGGCGGCTCGTCGTCCCCCGCTTCGCCGCCGCCATCATGATCGGCATCGCGCTGACCGGTGTCGTCTGCTTCGTCGGCTT
CCTCGGCGCATACCTATTCAATGTGTATTGGCAGAACGGCGCCCCGGGCAGCTTCGTCACCACCTTCTCTGCCTTCGCCA
CCCCCGGCGACATGATCCTGGCCCTGATCAAGGCCGTCATCTACGGCGCGATCGTGGCGGTGGTGGCCTGCCAGAAGGGT
CTGTCCACCAAGGGCGGCCCGATCGGCGTCGCCAACTCCGTCAACGCGGCCGTCGTCGAATCGATCCTGCTGCTGATGAC
GGTGAACCTGGCCATCAGCCAGCTGTACATCATGATGTTCCCGCGGACGGGGCTGTGA

Upstream 100 bases:

>100_bases
CTCGTAGATTGCTGGGATTTGTGTTCCAGGTCACACAGGGAGCTGTATTGATCGCCGTAGCCGCAACCCCTCCGAGCTGC
GTCTGTGTGGGTCACCTGCG

Downstream 100 bases:

>100_bases
CGTGACCGCATCAACTTATGTACCCCCGATTGCACGGCCCTTCGTCGGCATCTACAACAGGGTCCAGAAACCGGTCACCC
GGCTGGGCCACATGGTCGCG

Product: putative YrbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTTQDERRATNDGVAAIQDWTTGYVKRHPLESLKTVGEQFMLGVRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVI
LVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVI
RRLVVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALIKAVIYGAIVAVVACQKG
LSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMMFPRTGL

Sequences:

>Translated_285_residues
MTTQDERRATNDGVAAIQDWTTGYVKRHPLESLKTVGEQFMLGVRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVI
LVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVI
RRLVVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALIKAVIYGAIVAVVACQKG
LSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMMFPRTGL
>Mature_284_residues
TTQDERRATNDGVAAIQDWTTGYVKRHPLESLKTVGEQFMLGVRTIQWFFVDLFTGNFQWQEFVRQGAFQAGTAVVPVIL
VTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIR
RLVVPRFAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALIKAVIYGAIVAVVACQKGL
STKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMMFPRTGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=25.968992248062, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 30047; Mature: 29916

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTQDERRATNDGVAAIQDWTTGYVKRHPLESLKTVGEQFMLGVRTIQWFFVDLFTGNFQ
CCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
WQEFVRQGAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAA
HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMIGIALTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALIKAVIYGAIVAVVACQKG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
LSTKGGPIGVANSVNAAVVESILLLMTVNLAISQLYIMMFPRTGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]