| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627979
Identifier: 169627979
GI number: 169627979
Start: 874995
End: 876305
Strand: Direct
Name: 169627979
Synonym: MAB_0880
Alternate gene names: NA
Gene position: 874995-876305 (Clockwise)
Preceding gene: 169627978
Following gene: 169627980
Centisome position: 17.27
GC content: 65.45
Gene sequence:
>1311_bases GTGGCTGACCGCGGCGGGATATTCGTATCGCTGCGTACCCGTAACTACCGGCTGTGGATCAGCGGCCAGATGGTGTCGCT TATCGGCACCTGGATGCAGCGAGTGGCCCAGGACTGGCTGGTGCTGGATCTCTCGCACGGCAACGCCTTCCTGCTCGGGG TGGTGATGGCCCTGCAATTCGGGCCGACGCTGCTGCTGTCGGTGTGGGGCGGGATGCTGGCCGATCGCTACGACAAGCGA CGGATGCTCATGCTGACCCAGGCGCTGATGGCCCTGTTCGCGTTGACCGTGGGCCTGCTTCAGGTGACCGGACTGGTCCG GATCTGGCATGTGATGGCGGTGGCCTTTGCGATGGGATGTGCCGCGGCGATCGAGGCGCCCACGCGCCAGTCGTTCACCA TCGAGATGGTGGGGCCGGAGCACCTGCCCAACGCCGTCGGACTCAATTCGATGGTATTCAACCTCGCCGGCATCATCGGG CCGGCGACCTCGGGTGTGCTGATCGGGCTGATCGGCACGGGTTGGGTGTTCCTGCTGAACTTCGTCAGCTTCATCGCGGT AGGCATCGCGCTGTGGCGGATGCGCCCCGGCGAGCTGCATTCGAGCGAGCCCATCCCTGCGGCTAAGGGGCAGCTGCGCC AGGGGTTCTCATATGTATGGCGCCGCCGCGATCTGTTCATGATCATGCTGACGGTTTTTCTGGTCTCGACGTTCGGGCTG AATTTCTCGCTGACGCTCGCGGTGTTGGCCCGAGAGACCTTCGGCCGCGGCGCGGAGTCCTACGGGCTGCTCTCCACGGC GCTGGCCATCGGCACGCTGCTTGGCGCCACTTTCGCGGCCCGTCGCACCAAGAAGGTGCGCATGACGTTGTTCTACGGCG CGGCAATGGCTTTCGGGCTATCGGAAGTCGTAGTCAGCGTGATGCCCACCTACCTCTCGGTGGCCCTGGCCCTTGTCCCG GCAGGTCTGCTGGCGCTGACATTCACCACGTCGGCGATGAATATCATTCAGCTGTCCGTGGATTCGCAGCTGCGGGGAAG GGTGATGGGCATTTACATGGTGGCGTTCCTGGGAGGCACTCCGTTGGGCAGTCCGCTGGTGGGTTGGCTGGCCGACCTGC ACGGGGGCCGGATGCCGCTGTTGGTCGGCGGGCTGGTCTCGGCGGCGGCGGGGCTGGTATGTGCGACGTATCTGCACAGG CATCCGTGTCCTGTTGTCGCAGGCGAAGTTCCGGAGGCCGACGATATGGTGCCGCCTGCCCCGGCTGCCACCCCGGTATG CGAGCCGACGCCCTTGGCGAGGCGGTCGTAG
Upstream 100 bases:
>100_bases GACCAACGCGCGGTGTTGCGGCAGGCAACCGACCTGTTGTCGGCGCTGGTCAACGAAAACGGTTAGCTGACAATCTCCTT ACTCTCTAAAATGACCTTCC
Downstream 100 bases:
>100_bases ATGTTGGTTATCGATGTCCACGACCCCGCCGATTCGAGGCTCGACAGCTTCCGCGATCTCAATAGCGTCGACCGTAGGCC CGACCTGCCTAGCGGTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Transmembrane Efflux Protein; Facilitator Superfamily Permease; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Multidrug ABC Transporter; Macrolide-Efflux Protein; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Transporter-Like Membrane Protein; MFS Permease; MFS Family Membrane Efflux Protein; Transporter Facilitator Family; Facilitator Superfamily Multidrug Efflux Transporter; Membrane Efflux Protein MFS; Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator MFS1 Protein; MFS Family Transporter; Facilitator Family Transporter; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MADRGGIFVSLRTRNYRLWISGQMVSLIGTWMQRVAQDWLVLDLSHGNAFLLGVVMALQFGPTLLLSVWGGMLADRYDKR RMLMLTQALMALFALTVGLLQVTGLVRIWHVMAVAFAMGCAAAIEAPTRQSFTIEMVGPEHLPNAVGLNSMVFNLAGIIG PATSGVLIGLIGTGWVFLLNFVSFIAVGIALWRMRPGELHSSEPIPAAKGQLRQGFSYVWRRRDLFMIMLTVFLVSTFGL NFSLTLAVLARETFGRGAESYGLLSTALAIGTLLGATFAARRTKKVRMTLFYGAAMAFGLSEVVVSVMPTYLSVALALVP AGLLALTFTTSAMNIIQLSVDSQLRGRVMGIYMVAFLGGTPLGSPLVGWLADLHGGRMPLLVGGLVSAAAGLVCATYLHR HPCPVVAGEVPEADDMVPPAPAATPVCEPTPLARRS
Sequences:
>Translated_436_residues MADRGGIFVSLRTRNYRLWISGQMVSLIGTWMQRVAQDWLVLDLSHGNAFLLGVVMALQFGPTLLLSVWGGMLADRYDKR RMLMLTQALMALFALTVGLLQVTGLVRIWHVMAVAFAMGCAAAIEAPTRQSFTIEMVGPEHLPNAVGLNSMVFNLAGIIG PATSGVLIGLIGTGWVFLLNFVSFIAVGIALWRMRPGELHSSEPIPAAKGQLRQGFSYVWRRRDLFMIMLTVFLVSTFGL NFSLTLAVLARETFGRGAESYGLLSTALAIGTLLGATFAARRTKKVRMTLFYGAAMAFGLSEVVVSVMPTYLSVALALVP AGLLALTFTTSAMNIIQLSVDSQLRGRVMGIYMVAFLGGTPLGSPLVGWLADLHGGRMPLLVGGLVSAAAGLVCATYLHR HPCPVVAGEVPEADDMVPPAPAATPVCEPTPLARRS >Mature_435_residues ADRGGIFVSLRTRNYRLWISGQMVSLIGTWMQRVAQDWLVLDLSHGNAFLLGVVMALQFGPTLLLSVWGGMLADRYDKRR MLMLTQALMALFALTVGLLQVTGLVRIWHVMAVAFAMGCAAAIEAPTRQSFTIEMVGPEHLPNAVGLNSMVFNLAGIIGP ATSGVLIGLIGTGWVFLLNFVSFIAVGIALWRMRPGELHSSEPIPAAKGQLRQGFSYVWRRRDLFMIMLTVFLVSTFGLN FSLTLAVLARETFGRGAESYGLLSTALAIGTLLGATFAARRTKKVRMTLFYGAAMAFGLSEVVVSVMPTYLSVALALVPA GLLALTFTTSAMNIIQLSVDSQLRGRVMGIYMVAFLGGTPLGSPLVGWLADLHGGRMPLLVGGLVSAAAGLVCATYLHRH PCPVVAGEVPEADDMVPPAPAATPVCEPTPLARRS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46711; Mature: 46580
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRGGIFVSLRTRNYRLWISGQMVSLIGTWMQRVAQDWLVLDLSHGNAFLLGVVMALQF CCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHH GPTLLLSVWGGMLADRYDKRRMLMLTQALMALFALTVGLLQVTGLVRIWHVMAVAFAMGC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAIEAPTRQSFTIEMVGPEHLPNAVGLNSMVFNLAGIIGPATSGVLIGLIGTGWVFLLN HHHHCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH FVSFIAVGIALWRMRPGELHSSEPIPAAKGQLRQGFSYVWRRRDLFMIMLTVFLVSTFGL HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NFSLTLAVLARETFGRGAESYGLLSTALAIGTLLGATFAARRTKKVRMTLFYGAAMAFGL CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH SEVVVSVMPTYLSVALALVPAGLLALTFTTSAMNIIQLSVDSQLRGRVMGIYMVAFLGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHCCC PLGSPLVGWLADLHGGRMPLLVGGLVSAAAGLVCATYLHRHPCPVVAGEVPEADDMVPPA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC PAATPVCEPTPLARRS CCCCCCCCCCCCCCCC >Mature Secondary Structure ADRGGIFVSLRTRNYRLWISGQMVSLIGTWMQRVAQDWLVLDLSHGNAFLLGVVMALQF CCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHH GPTLLLSVWGGMLADRYDKRRMLMLTQALMALFALTVGLLQVTGLVRIWHVMAVAFAMGC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAIEAPTRQSFTIEMVGPEHLPNAVGLNSMVFNLAGIIGPATSGVLIGLIGTGWVFLLN HHHHCCCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH FVSFIAVGIALWRMRPGELHSSEPIPAAKGQLRQGFSYVWRRRDLFMIMLTVFLVSTFGL HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NFSLTLAVLARETFGRGAESYGLLSTALAIGTLLGATFAARRTKKVRMTLFYGAAMAFGL CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH SEVVVSVMPTYLSVALALVPAGLLALTFTTSAMNIIQLSVDSQLRGRVMGIYMVAFLGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHCCC PLGSPLVGWLADLHGGRMPLLVGGLVSAAAGLVCATYLHRHPCPVVAGEVPEADDMVPPA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC PAATPVCEPTPLARRS CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA