Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169627972

Identifier: 169627972

GI number: 169627972

Start: 869917

End: 870672

Strand: Direct

Name: 169627972

Synonym: MAB_0873

Alternate gene names: NA

Gene position: 869917-870672 (Clockwise)

Preceding gene: 169627971

Following gene: 169627975

Centisome position: 17.17

GC content: 65.08

Gene sequence:

>756_bases
TTGTCCGCGCTGTCGCCAGCGAGTTGGACGCCTGATCTGACACCCGTCCGCGCCGAGGATGTGATGGCGGCGCTCGACGC
CGCCGGCGATTCTGATCGTGCCGCTAAGTCGGCGCGGTTCTTCAAGACCGGGCCCGGTGAGTACGGCGAGGGAGACGTGT
TCCTCGGTGTGTCCGTACCCGAGCAGCGCAAGCTCGTACGGCGATTCCGGGGGATCACTCGTGGCGAGGTGGTGCGGTTA
CTCGCCAGCGACGTGCATGAGCACCGGCTGACGGGGCTCATCCTGGCGGTCTGGGAGTTCACACACGCCGAAATGGCCGA
GCGTGAAGCCTGGGTGGGTATGTATCTGGCGCAGGTGCTCGCCGGCCGGGTGAACAACTGGGATCTGGTTGATTCCTCTG
CCGAGCAGATCTTGGGTGAATGGCTTGTCGGCCAGGATTATTCACTGCTGCTGGAGTTGGCCGCCGACGAAGAGCTCTGG
CGGCGCCGCGTCGGGATCATCGGTACGTTCGCGTTCATCAGACGCGGAGACGCCGTGCCCTTGCTGTCCATGGCGCCATT
GCTGATCGACGACCGTCGTGATCTCGTCCAGAAGGCCTTCGGCTGGATGCTCCGCGAGTCCGGAAAGCGTTGTGGCACAG
AGGTGCTGCTCGGCTATCTGGATGAGCATGCCGCCGCCATGGGCCGCACGGCGCTCAGTTATGCCACCGAGCATCTGGAC
GCCGGGGTGCGCGCGAGGTATCGCGCTGCGCGCTAG

Upstream 100 bases:

>100_bases
ATGATCGAAGACATGATCACGCTGCTGGAGGGCACGGTGCAGACCGAGCTGCGTAAGGGGCGTTACCCGGACCGCAAGAT
CGCCCGCAAGGTGTCCGAGG

Downstream 100 bases:

>100_bases
TCCTTCCAGACCGTCGCGACCGACCACACGGCATGGGTCACTTCCAGCAGGTCGCCGGTCTCGGTCTGAACCACCGTGGG
CAGCTTGATTTCCAGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Alkylation Repair Protein; DNA Alkylation Repair Superfamily; Glucose/Ribitol Dehydrogenase

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSALSPASWTPDLTPVRAEDVMAALDAAGDSDRAAKSARFFKTGPGEYGEGDVFLGVSVPEQRKLVRRFRGITRGEVVRL
LASDVHEHRLTGLILAVWEFTHAEMAEREAWVGMYLAQVLAGRVNNWDLVDSSAEQILGEWLVGQDYSLLLELAADEELW
RRRVGIIGTFAFIRRGDAVPLLSMAPLLIDDRRDLVQKAFGWMLRESGKRCGTEVLLGYLDEHAAAMGRTALSYATEHLD
AGVRARYRAAR

Sequences:

>Translated_251_residues
MSALSPASWTPDLTPVRAEDVMAALDAAGDSDRAAKSARFFKTGPGEYGEGDVFLGVSVPEQRKLVRRFRGITRGEVVRL
LASDVHEHRLTGLILAVWEFTHAEMAEREAWVGMYLAQVLAGRVNNWDLVDSSAEQILGEWLVGQDYSLLLELAADEELW
RRRVGIIGTFAFIRRGDAVPLLSMAPLLIDDRRDLVQKAFGWMLRESGKRCGTEVLLGYLDEHAAAMGRTALSYATEHLD
AGVRARYRAAR
>Mature_250_residues
SALSPASWTPDLTPVRAEDVMAALDAAGDSDRAAKSARFFKTGPGEYGEGDVFLGVSVPEQRKLVRRFRGITRGEVVRLL
ASDVHEHRLTGLILAVWEFTHAEMAEREAWVGMYLAQVLAGRVNNWDLVDSSAEQILGEWLVGQDYSLLLELAADEELWR
RRVGIIGTFAFIRRGDAVPLLSMAPLLIDDRRDLVQKAFGWMLRESGKRCGTEVLLGYLDEHAAAMGRTALSYATEHLDA
GVRARYRAAR

Specific function: Unknown

COG id: COG4912

COG function: function code L; Predicted DNA alkylation repair enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27872; Mature: 27741

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCC
>Mature Secondary Structure 
SALSPASWTPDLTPVRAEDVMAALDAAGDSDRAAKSARFFKTGPGEYGEGDVFLGVSVP
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCC
EQRKLVRRFRGITRGEVVRLLASDVHEHRLTGLILAVWEFTHAEMAEREAWVGMYLAQVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRVNNWDLVDSSAEQILGEWLVGQDYSLLLELAADEELWRRRVGIIGTFAFIRRGDAVP
HCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
LLSMAPLLIDDRRDLVQKAFGWMLRESGKRCGTEVLLGYLDEHAAAMGRTALSYATEHLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGVRARYRAAR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA