| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627953
Identifier: 169627953
GI number: 169627953
Start: 850740
End: 852104
Strand: Direct
Name: 169627953
Synonym: MAB_0854
Alternate gene names: NA
Gene position: 850740-852104 (Clockwise)
Preceding gene: 169627952
Following gene: 169627954
Centisome position: 16.79
GC content: 64.25
Gene sequence:
>1365_bases GTGACGGCAACGATTCAGGAGACCAAGGCGCACGCGGTCGCGACATCCGGCTCGATCGCTCATCTGGACTTCGTCGATCA GGCATCTTTCCTCGGTTTGCGTGCCACGGAAATGGCCACGCTGAGCCAGATGGTGTGGATATATGAGCGCGATATCGACA CCGACCGGTTGCGCAGGTTCCACGCCAATCTTGGCCGGGGGTTGTTCGGCCGGCGAATCCAGCGTTCCCGCTTGCCGTTC GGCAGGCACCGATGGGTGCTCGATCCGGCGTGCCACCCGATCGACGTGGAGCTGGCGCCGCTGCCACGCGCCGAACTGCA GGACTGGGTACACCGTCATGCACAGCTGCCGATCGACCCTGAGCATGGCCCCTCCTGGCGACTGGGTGTCACCCGGTTCA CCGATGGTGCCGCTGCGGTCAGCCTGGTGGTTTCGCACAGCATCGCCGACGGGGTAGGGCTGTGCCGCGGTATCGCCGAC GCCGTCAATGATGCCGAATTACCGCTGGGCTATGCCGAACCGCAGGCGCGCAAGCGTTTTCGGAGCATGAGGGAAGACTT GCGGCGCGCCAGACGCGACCTGCCGGATACCGCGCGGGCCTTTCGCAAGGCCACCAAGCTGTTGACTGCGCGGCGCCAGG ACATCAAACACGCCGGGTTGCCCACGATTGCCGCACATGTGGACCGGGTCGCGGCGGCCACCGTGTATCTGGATGAAAAC CATTGGGATACACATGCGCATGGCCGTGGTGGCACCAGCAATTCATTGGTGGGCGCCTTCGCGGCCCAGTTGGCCGCCAA GGCGGGGCGGCTGGGACGGGACGGTCGGGTCACCCTTTCCATGCCGGTCAACGAGCGCACCGAGGGTGATCATCGTGCCA ACGCGATGACCTCTGTGATGTTCGCGATCGACCCGGTGCGGCTGACCACCGATCTCAGTGGCATCAGGAGCGCCACCAAG AAGGTGCTTTCCGGATTGCGCGACGCACCCGACGAGAAGTGGGCACTGCTGCCGTTGACGCCCTTCATTCCGAAGGCGGC CGCGCGCCGACTCGCCGACGTCGCGTTGGAGTACAACGACTATCCCGTCGGATGTTCGAATGTCGGAGCGCTACCTGCCG AGGTGAATCGTCCCGATGGTACGGAAGCCGACTACATCTTCTGCAAATTGGCCGAGCAAAGGGTGCGGCCCGACAAGGTA CTGAGCACCTACGGACAATTGTTCCTGGCATCCGGGCGCGCCAACCGCAAGGTGTTCTTGGCTGTCGTCGCATACCAGCC CGGTGTGATCGAATCACGCGCCGACCTGACCACCCTGCTGGCCGAGACGCTCGACGACTTCGGCCTGCACGCCGTGATCG AGTAG
Upstream 100 bases:
>100_bases ACCAATTCGACGTGACCAAGGCGGATGCTGATCCCCGGAGTGTGCGGCTGATCAACGAGCTCTACACCACATTGGGGGTG TCACCGGCGGGAGAATCGCT
Downstream 100 bases:
>100_bases TCGTGGCGGAGAACACAGGTGGCATTTACGGACTGATCGCGCAGATCGTCCGGCGGGCCCCTGTCATCGTGATCGGGCTG TGGATCGGACTGGCCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTATIQETKAHAVATSGSIAHLDFVDQASFLGLRATEMATLSQMVWIYERDIDTDRLRRFHANLGRGLFGRRIQRSRLPF GRHRWVLDPACHPIDVELAPLPRAELQDWVHRHAQLPIDPEHGPSWRLGVTRFTDGAAAVSLVVSHSIADGVGLCRGIAD AVNDAELPLGYAEPQARKRFRSMREDLRRARRDLPDTARAFRKATKLLTARRQDIKHAGLPTIAAHVDRVAAATVYLDEN HWDTHAHGRGGTSNSLVGAFAAQLAAKAGRLGRDGRVTLSMPVNERTEGDHRANAMTSVMFAIDPVRLTTDLSGIRSATK KVLSGLRDAPDEKWALLPLTPFIPKAAARRLADVALEYNDYPVGCSNVGALPAEVNRPDGTEADYIFCKLAEQRVRPDKV LSTYGQLFLASGRANRKVFLAVVAYQPGVIESRADLTTLLAETLDDFGLHAVIE
Sequences:
>Translated_454_residues MTATIQETKAHAVATSGSIAHLDFVDQASFLGLRATEMATLSQMVWIYERDIDTDRLRRFHANLGRGLFGRRIQRSRLPF GRHRWVLDPACHPIDVELAPLPRAELQDWVHRHAQLPIDPEHGPSWRLGVTRFTDGAAAVSLVVSHSIADGVGLCRGIAD AVNDAELPLGYAEPQARKRFRSMREDLRRARRDLPDTARAFRKATKLLTARRQDIKHAGLPTIAAHVDRVAAATVYLDEN HWDTHAHGRGGTSNSLVGAFAAQLAAKAGRLGRDGRVTLSMPVNERTEGDHRANAMTSVMFAIDPVRLTTDLSGIRSATK KVLSGLRDAPDEKWALLPLTPFIPKAAARRLADVALEYNDYPVGCSNVGALPAEVNRPDGTEADYIFCKLAEQRVRPDKV LSTYGQLFLASGRANRKVFLAVVAYQPGVIESRADLTTLLAETLDDFGLHAVIE >Mature_453_residues TATIQETKAHAVATSGSIAHLDFVDQASFLGLRATEMATLSQMVWIYERDIDTDRLRRFHANLGRGLFGRRIQRSRLPFG RHRWVLDPACHPIDVELAPLPRAELQDWVHRHAQLPIDPEHGPSWRLGVTRFTDGAAAVSLVVSHSIADGVGLCRGIADA VNDAELPLGYAEPQARKRFRSMREDLRRARRDLPDTARAFRKATKLLTARRQDIKHAGLPTIAAHVDRVAAATVYLDENH WDTHAHGRGGTSNSLVGAFAAQLAAKAGRLGRDGRVTLSMPVNERTEGDHRANAMTSVMFAIDPVRLTTDLSGIRSATKK VLSGLRDAPDEKWALLPLTPFIPKAAARRLADVALEYNDYPVGCSNVGALPAEVNRPDGTEADYIFCKLAEQRVRPDKVL STYGQLFLASGRANRKVFLAVVAYQPGVIESRADLTTLLAETLDDFGLHAVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49951; Mature: 49820
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATIQETKAHAVATSGSIAHLDFVDQASFLGLRATEMATLSQMVWIYERDIDTDRLRRF CCCCCHHHHHHHEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH HANLGRGLFGRRIQRSRLPFGRHRWVLDPACHPIDVELAPLPRAELQDWVHRHAQLPIDP HHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCC EHGPSWRLGVTRFTDGAAAVSLVVSHSIADGVGLCRGIADAVNDAELPLGYAEPQARKRF CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RSMREDLRRARRDLPDTARAFRKATKLLTARRQDIKHAGLPTIAAHVDRVAAATVYLDEN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECC HWDTHAHGRGGTSNSLVGAFAAQLAAKAGRLGRDGRVTLSMPVNERTEGDHRANAMTSVM CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH FAIDPVRLTTDLSGIRSATKKVLSGLRDAPDEKWALLPLTPFIPKAAARRLADVALEYND HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC YPVGCSNVGALPAEVNRPDGTEADYIFCKLAEQRVRPDKVLSTYGQLFLASGRANRKVFL CCCCCCCCCCCCCCCCCCCCCCCCEEHEEHHHHHCCHHHHHHHHHHHEEECCCCCCEEEE AVVAYQPGVIESRADLTTLLAETLDDFGLHAVIE EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure TATIQETKAHAVATSGSIAHLDFVDQASFLGLRATEMATLSQMVWIYERDIDTDRLRRF CCCCHHHHHHHEECCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH HANLGRGLFGRRIQRSRLPFGRHRWVLDPACHPIDVELAPLPRAELQDWVHRHAQLPIDP HHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCC EHGPSWRLGVTRFTDGAAAVSLVVSHSIADGVGLCRGIADAVNDAELPLGYAEPQARKRF CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RSMREDLRRARRDLPDTARAFRKATKLLTARRQDIKHAGLPTIAAHVDRVAAATVYLDEN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECC HWDTHAHGRGGTSNSLVGAFAAQLAAKAGRLGRDGRVTLSMPVNERTEGDHRANAMTSVM CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH FAIDPVRLTTDLSGIRSATKKVLSGLRDAPDEKWALLPLTPFIPKAAARRLADVALEYND HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC YPVGCSNVGALPAEVNRPDGTEADYIFCKLAEQRVRPDKVLSTYGQLFLASGRANRKVFL CCCCCCCCCCCCCCCCCCCCCCCCEEHEEHHHHHCCHHHHHHHHHHHEEECCCCCCEEEE AVVAYQPGVIESRADLTTLLAETLDDFGLHAVIE EEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA