| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mmlH [H]
Identifier: 169627872
GI number: 169627872
Start: 768994
End: 770919
Strand: Reverse
Name: mmlH [H]
Synonym: MAB_0771c
Alternate gene names: 169627872
Gene position: 770919-768994 (Counterclockwise)
Preceding gene: 169627873
Following gene: 169627870
Centisome position: 15.21
GC content: 64.95
Gene sequence:
>1926_bases ATGAGCAATATCAAGATCACCGTCGACGGCAAGGTCCTCATGGACACCGACCCAGGTAAGTGGCGTTCCACGCCGCCGGA TATCCCCGACCTTAAGCGCCAATCCGGCGGGCAGGATTGGGGTCTGGCCGTGATAGTCACTCTCGCACAGGCGGGCACGC TGGCCGAGCTGGGCCAGCCCACTGGGAACACCACGATGACCATCACTACCCGCGCCAACGGCTGGACGCTGGATGTGGAG CAGGACGGCAGCGAGCCATCCGTCGCACCCGGGAAGGGTCGTGCCTGCGCCCACTGCACCGCCAGCGCACGCCGAGGCCG ATACAAGCGCTGGGCGCCAAGGATTTTCGTCGGATGTGGTGATCATGGAACCCTATGTCGCCGAGGCCCGACCATAAGGC CAGCACCACCGATCGCGGTCTGGGCTGGAAACTACGGACTCTTATGCCGCCTTCCGCTCAGGCTCGACTGGGGCCTGAGC GGCTGGCAGCTGGCGAATCTGCGGATCTTTTGCGCAATCCTGCGGACTTTTAATCCGCAGGTCCCAGGTTCGAGCCCTGG TGGGGCACCAGATCATCCGTTGCAATCAGCGGGAGCAGGAGCCTTACCAGGCCGTCGACCGGCTCATACCGTTCGGCCAA TGACTTCCACGGCCGAGAACACCACCGGGACGCACCCGCCCCAATCCCGTCCCGTGACGTTCCGGCAGGCGTTCTTCGTC GCGTTGACCGCAGGCCTCGGGTACGGGTTCGACTCCTACGCGGTGAACATCTACGGCCTAGTGCTACCGGAGATCAAGGA CACACTGCACATCACCGAGGCGCAGGCCGGGTACATCGGCTCGATCTTCCTGCTCGGGTACACCATCGGCACCGTCGGAT TCGGCCTCGCCGCCGATCGCTGGGGCCGGAAGACCACCCTCGGGGCCTCGATCCTGCTGTATGGCATAACCACCGCCCTG GCCGGCCTGACCACCAATGTGGCCGCGTTCACCGGGTTGCGCTTTTTGACGGGTGTGGGCGGTGCCGGCGAGCTCGCGGT CGGCGCGCCCTACACCGCCGAGGTGTGGCCGGCCAAGACACGGGCCATCGGCGTTGGTGGCGTGATCTTTTCGCTCTTCT CACTCGGTTACGTCCTGGCCGCCGGGGTCGCACTCGTATTGGTCCCGCGGTTTGGCTGGCAGGCGGCATTCATCGTCGCG ATCATCCCCGCGGTGGTGCTTTTCCTTGCCCGCCAAGGCATCAAGGAATCGCACCGCTACACCCAAACCAAGGCGCGCGT CCAAGGCCGTGCCACCAGGCCGAAGCTGTGGCATGTTCCCGGAGTACGGCGGCGCCTCGTCGTCGGCTGGCTCGTCTACA CCGCCAATGCGGTCGGCTACTGGGGCATGACCCTGTTCTTGACCACCTACATCGTCAAGAAGTTTCATGCCACCTCCATT GACGCGATCCGTTACGCCCTCGCCTTCTTCCTGCTACAGGCTGTGTTCGTCTTCATCGGCACCGCACTGGCCGACCGGAT CGGGCGGCGACCCTCGGCCGTCCTCGGCGCCCTGATCGAAATCGCCTCCACCGCATTGGGAGCCACTTCGGACACCCTGC CGGAGTACCTGGTGTTCGGCGCCATCTCCATCGCCACCTTGGGCTGGCTGTGGGGAGTCGGTGACACCTACGTCGCCGAA CTCTTCCCCACCGTGCTACGCGGCACCGGGTTCGGCATCGCCGTCGGCGGCGGCCGCGTCGTCTCCATCGCGGCGCCGGC CCTGGTGGGCTGGGCCATCACGCATTACGGAATCCAAACGCCCTACCTGGCTCTCAGCGGCCTGTGGATACTGACGATCA TCGGATACCTGCTTGGACCGGAAACCAAGGGTAAAGAGCTGGAAGACCTTGCCGACGAGGCGCTTACCGAGGATCTGCCG GGCTGA
Upstream 100 bases:
>100_bases GCACCGACCACCAGCGCGCCACGCCCTTGTTGGTGCTGACGGTCGGCAAGACCGACGACGTGACGATCGATGCCCGTCAA CTACGAAAGTTCCTAGCCCA
Downstream 100 bases:
>100_bases TCGCTAAGCGACCTCGCACACCTGTCCGCCGGTGATCCGGACAAGCTCGGCGAAGGTGAGCGGAAAGACAGTGCGCGGCG TGCCACCGGCCGCCCAGATC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSNIKITVDGKVLMDTDPGKWRSTPPDIPDLKRQSGGQDWGLAVIVTLAQAGTLAELGQPTGNTTMTITTRANGWTLDVE QDGSEPSVAPGKGRACAHCTASARRGRYKRWAPRIFVGCGDHGTLCRRGPTIRPAPPIAVWAGNYGLLCRLPLRLDWGLS GWQLANLRIFCAILRTFNPQVPGSSPGGAPDHPLQSAGAGALPGRRPAHTVRPMTSTAENTTGTHPPQSRPVTFRQAFFV ALTAGLGYGFDSYAVNIYGLVLPEIKDTLHITEAQAGYIGSIFLLGYTIGTVGFGLAADRWGRKTTLGASILLYGITTAL AGLTTNVAAFTGLRFLTGVGGAGELAVGAPYTAEVWPAKTRAIGVGGVIFSLFSLGYVLAAGVALVLVPRFGWQAAFIVA IIPAVVLFLARQGIKESHRYTQTKARVQGRATRPKLWHVPGVRRRLVVGWLVYTANAVGYWGMTLFLTTYIVKKFHATSI DAIRYALAFFLLQAVFVFIGTALADRIGRRPSAVLGALIEIASTALGATSDTLPEYLVFGAISIATLGWLWGVGDTYVAE LFPTVLRGTGFGIAVGGGRVVSIAAPALVGWAITHYGIQTPYLALSGLWILTIIGYLLGPETKGKELEDLADEALTEDLP G
Sequences:
>Translated_641_residues MSNIKITVDGKVLMDTDPGKWRSTPPDIPDLKRQSGGQDWGLAVIVTLAQAGTLAELGQPTGNTTMTITTRANGWTLDVE QDGSEPSVAPGKGRACAHCTASARRGRYKRWAPRIFVGCGDHGTLCRRGPTIRPAPPIAVWAGNYGLLCRLPLRLDWGLS GWQLANLRIFCAILRTFNPQVPGSSPGGAPDHPLQSAGAGALPGRRPAHTVRPMTSTAENTTGTHPPQSRPVTFRQAFFV ALTAGLGYGFDSYAVNIYGLVLPEIKDTLHITEAQAGYIGSIFLLGYTIGTVGFGLAADRWGRKTTLGASILLYGITTAL AGLTTNVAAFTGLRFLTGVGGAGELAVGAPYTAEVWPAKTRAIGVGGVIFSLFSLGYVLAAGVALVLVPRFGWQAAFIVA IIPAVVLFLARQGIKESHRYTQTKARVQGRATRPKLWHVPGVRRRLVVGWLVYTANAVGYWGMTLFLTTYIVKKFHATSI DAIRYALAFFLLQAVFVFIGTALADRIGRRPSAVLGALIEIASTALGATSDTLPEYLVFGAISIATLGWLWGVGDTYVAE LFPTVLRGTGFGIAVGGGRVVSIAAPALVGWAITHYGIQTPYLALSGLWILTIIGYLLGPETKGKELEDLADEALTEDLP G >Mature_640_residues SNIKITVDGKVLMDTDPGKWRSTPPDIPDLKRQSGGQDWGLAVIVTLAQAGTLAELGQPTGNTTMTITTRANGWTLDVEQ DGSEPSVAPGKGRACAHCTASARRGRYKRWAPRIFVGCGDHGTLCRRGPTIRPAPPIAVWAGNYGLLCRLPLRLDWGLSG WQLANLRIFCAILRTFNPQVPGSSPGGAPDHPLQSAGAGALPGRRPAHTVRPMTSTAENTTGTHPPQSRPVTFRQAFFVA LTAGLGYGFDSYAVNIYGLVLPEIKDTLHITEAQAGYIGSIFLLGYTIGTVGFGLAADRWGRKTTLGASILLYGITTALA GLTTNVAAFTGLRFLTGVGGAGELAVGAPYTAEVWPAKTRAIGVGGVIFSLFSLGYVLAAGVALVLVPRFGWQAAFIVAI IPAVVLFLARQGIKESHRYTQTKARVQGRATRPKLWHVPGVRRRLVVGWLVYTANAVGYWGMTLFLTTYIVKKFHATSID AIRYALAFFLLQAVFVFIGTALADRIGRRPSAVLGALIEIASTALGATSDTLPEYLVFGAISIATLGWLWGVGDTYVAEL FPTVLRGTGFGIAVGGGRVVSIAAPALVGWAITHYGIQTPYLALSGLWILTIIGYLLGPETKGKELEDLADEALTEDLPG
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI166064021, Length=409, Percent_Identity=24.6943765281174, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI87082404, Length=410, Percent_Identity=26.3414634146341, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI87082231, Length=206, Percent_Identity=30.0970873786408, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788068, Length=425, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790550, Length=405, Percent_Identity=21.9753086419753, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI87082159, Length=410, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 68079; Mature: 67947
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIKITVDGKVLMDTDPGKWRSTPPDIPDLKRQSGGQDWGLAVIVTLAQAGTLAELGQP CCCEEEEECCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHCCC TGNTTMTITTRANGWTLDVEQDGSEPSVAPGKGRACAHCTASARRGRYKRWAPRIFVGCG CCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCEEEEEEC DHGTLCRRGPTIRPAPPIAVWAGNYGLLCRLPLRLDWGLSGWQLANLRIFCAILRTFNPQ CCCCHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCC VPGSSPGGAPDHPLQSAGAGALPGRRPAHTVRPMTSTAENTTGTHPPQSRPVTFRQAFFV CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALTAGLGYGFDSYAVNIYGLVLPEIKDTLHITEAQAGYIGSIFLLGYTIGTVGFGLAADR HHHHHCCCCCCHHEEEEEEEECCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHH WGRKTTLGASILLYGITTALAGLTTNVAAFTGLRFLTGVGGAGELAVGAPYTAEVWPAKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCH RAIGVGGVIFSLFSLGYVLAAGVALVLVPRFGWQAAFIVAIIPAVVLFLARQGIKESHRY HEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTKARVQGRATRPKLWHVPGVRRRLVVGWLVYTANAVGYWGMTLFLTTYIVKKFHATSI HHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHH DAIRYALAFFLLQAVFVFIGTALADRIGRRPSAVLGALIEIASTALGATSDTLPEYLVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AISIATLGWLWGVGDTYVAELFPTVLRGTGFGIAVGGGRVVSIAAPALVGWAITHYGIQT HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHHHHHHHHCCCC PYLALSGLWILTIIGYLLGPETKGKELEDLADEALTEDLPG CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SNIKITVDGKVLMDTDPGKWRSTPPDIPDLKRQSGGQDWGLAVIVTLAQAGTLAELGQP CCEEEEECCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHCCC TGNTTMTITTRANGWTLDVEQDGSEPSVAPGKGRACAHCTASARRGRYKRWAPRIFVGCG CCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCCEEEEEEC DHGTLCRRGPTIRPAPPIAVWAGNYGLLCRLPLRLDWGLSGWQLANLRIFCAILRTFNPQ CCCCHHCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEHHHHHHHHHHHHCCCC VPGSSPGGAPDHPLQSAGAGALPGRRPAHTVRPMTSTAENTTGTHPPQSRPVTFRQAFFV CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALTAGLGYGFDSYAVNIYGLVLPEIKDTLHITEAQAGYIGSIFLLGYTIGTVGFGLAADR HHHHHCCCCCCHHEEEEEEEECCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHH WGRKTTLGASILLYGITTALAGLTTNVAAFTGLRFLTGVGGAGELAVGAPYTAEVWPAKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCH RAIGVGGVIFSLFSLGYVLAAGVALVLVPRFGWQAAFIVAIIPAVVLFLARQGIKESHRY HEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTKARVQGRATRPKLWHVPGVRRRLVVGWLVYTANAVGYWGMTLFLTTYIVKKFHATSI HHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHH DAIRYALAFFLLQAVFVFIGTALADRIGRRPSAVLGALIEIASTALGATSDTLPEYLVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AISIATLGWLWGVGDTYVAELFPTVLRGTGFGIAVGGGRVVSIAAPALVGWAITHYGIQT HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHHHHHHHHCCCC PYLALSGLWILTIIGYLLGPETKGKELEDLADEALTEDLPG CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]