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The map label for this gene is dppC [H]

Identifier: 169627822

GI number: 169627822

Start: 723626

End: 724567

Strand: Direct

Name: dppC [H]

Synonym: MAB_0721

Alternate gene names: 169627822

Gene position: 723626-724567 (Clockwise)

Preceding gene: 169627821

Following gene: 169627823

Centisome position: 14.28

GC content: 63.69

Gene sequence:

>942_bases
ATGACAACGTCAGTGAGCAAGCCACACGGAAACCGGCTCCGCAGGCTCCCGGGCGCCGACCTACTGCGCTCCGTGCATGG
GCTGCAGCGCTGGACGCTCGTCGTCGGTCTCGTTCTCGTCGCCGGATTCATCGCCATCGCGGTGTTGGCACCCGTTCTGG
CGCCCTACGGGTTCTCGCAAACCAGCGCGGACGGCCTCGATTTCGTTCGGCAGCAGGCTCCGTCCTGGCAGCACTGGTTC
GGTACCTCGGTGCGCGGAGAAGATGTGTTGTCTCGTGTGCTGTTCGGCGCGCGCACTGCGCTGCTGGTCATTGTTACCTC
GCTGGTGGTTTCGCTACCCGCGGGCGTGGTGCTGGGTCTTACCTCCGGATACCTGGGCGGCTGGCTGGATCGCGCGTTGG
TACTGGTGATGGACGCGCTATACGCCATGCCCTCATTGTTGCTGGCCATCGTGGTGTCAATCGCGGTCACCGGCGGGCAA
TCCAGCACTGGGGGAGGCATACTCGCGGCGGCCATCGCCATCATGGCCGTCTTCGTGCCGCAGTACTTTCGGGTGGTGCG
TAACGCCACCGTAGGTGTGAAACAGGAGCCCTTCGTCGATGCCGCAAGAGTTACGGGCGCCGGTACCCCTCGGATCTTGT
TCCGGCACATCCTTTCCAACGTCACCTCCTCACTGCCGGTCATCATCACCCTCAACGGAGCGGAGGCGATTCTGACGCTG
GCGGGGCTGGGCTTCCTGGGCTTCGGGATCGAGCCCACCCAGGCCGCTGAATGGGGCTATGACCTAAACAAGGCGTTATC
GGATGTGGCCAACGGAATTTGGTGGACGGGGGTGTTTCCGGGTATCGCCATAGTCCTGGTGGTGCTGGGCATGACGCTGG
TGGGTGAGAGCCTCAACGAGGTCATCAACCCCCTGTTGCGGACCCGGCGGGGTGAGGCATGA

Upstream 100 bases:

>100_bases
CGGTGCAAGGCATCGTCACAGTGATCGCGATCATCGTCGCGGTGATGAGCTTCGTCATCGACTTGGTGGTGGCCTTCATC
GACCCGAGGGTGAGGTTCTG

Downstream 100 bases:

>100_bases
GCCACGTCGAAGCCTCGTCGGCACTTTCCTTTCGGTCGTTGTCGGTGACGTTCAGCACCGACAGTGGTCCGGTGTCCGCG
GTCGACGACGTATCGTTCGA

Product: oligopeptide ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTTSVSKPHGNRLRRLPGADLLRSVHGLQRWTLVVGLVLVAGFIAIAVLAPVLAPYGFSQTSADGLDFVRQQAPSWQHWF
GTSVRGEDVLSRVLFGARTALLVIVTSLVVSLPAGVVLGLTSGYLGGWLDRALVLVMDALYAMPSLLLAIVVSIAVTGGQ
SSTGGGILAAAIAIMAVFVPQYFRVVRNATVGVKQEPFVDAARVTGAGTPRILFRHILSNVTSSLPVIITLNGAEAILTL
AGLGFLGFGIEPTQAAEWGYDLNKALSDVANGIWWTGVFPGIAIVLVVLGMTLVGESLNEVINPLLRTRRGEA

Sequences:

>Translated_313_residues
MTTSVSKPHGNRLRRLPGADLLRSVHGLQRWTLVVGLVLVAGFIAIAVLAPVLAPYGFSQTSADGLDFVRQQAPSWQHWF
GTSVRGEDVLSRVLFGARTALLVIVTSLVVSLPAGVVLGLTSGYLGGWLDRALVLVMDALYAMPSLLLAIVVSIAVTGGQ
SSTGGGILAAAIAIMAVFVPQYFRVVRNATVGVKQEPFVDAARVTGAGTPRILFRHILSNVTSSLPVIITLNGAEAILTL
AGLGFLGFGIEPTQAAEWGYDLNKALSDVANGIWWTGVFPGIAIVLVVLGMTLVGESLNEVINPLLRTRRGEA
>Mature_312_residues
TTSVSKPHGNRLRRLPGADLLRSVHGLQRWTLVVGLVLVAGFIAIAVLAPVLAPYGFSQTSADGLDFVRQQAPSWQHWFG
TSVRGEDVLSRVLFGARTALLVIVTSLVVSLPAGVVLGLTSGYLGGWLDRALVLVMDALYAMPSLLLAIVVSIAVTGGQS
STGGGILAAAIAIMAVFVPQYFRVVRNATVGVKQEPFVDAARVTGAGTPRILFRHILSNVTSSLPVIITLNGAEAILTLA
GLGFLGFGIEPTQAAEWGYDLNKALSDVANGIWWTGVFPGIAIVLVVLGMTLVGESLNEVINPLLRTRRGEA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=265, Percent_Identity=37.3584905660377, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1789964, Length=268, Percent_Identity=37.3134328358209, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787760, Length=303, Percent_Identity=31.3531353135314, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789889, Length=248, Percent_Identity=32.258064516129, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787549, Length=280, Percent_Identity=33.9285714285714, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1787498, Length=291, Percent_Identity=30.9278350515464, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788505, Length=256, Percent_Identity=26.5625, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32957; Mature: 32826

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSVSKPHGNRLRRLPGADLLRSVHGLQRWTLVVGLVLVAGFIAIAVLAPVLAPYGFSQ
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSADGLDFVRQQAPSWQHWFGTSVRGEDVLSRVLFGARTALLVIVTSLVVSLPAGVVLGL
CCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSGYLGGWLDRALVLVMDALYAMPSLLLAIVVSIAVTGGQSSTGGGILAAAIAIMAVFVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QYFRVVRNATVGVKQEPFVDAARVTGAGTPRILFRHILSNVTSSLPVIITLNGAEAILTL
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
AGLGFLGFGIEPTQAAEWGYDLNKALSDVANGIWWTGVFPGIAIVLVVLGMTLVGESLNE
HHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VINPLLRTRRGEA
HHHHHHHHCCCCC
>Mature Secondary Structure 
TTSVSKPHGNRLRRLPGADLLRSVHGLQRWTLVVGLVLVAGFIAIAVLAPVLAPYGFSQ
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TSADGLDFVRQQAPSWQHWFGTSVRGEDVLSRVLFGARTALLVIVTSLVVSLPAGVVLGL
CCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSGYLGGWLDRALVLVMDALYAMPSLLLAIVVSIAVTGGQSSTGGGILAAAIAIMAVFVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QYFRVVRNATVGVKQEPFVDAARVTGAGTPRILFRHILSNVTSSLPVIITLNGAEAILTL
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
AGLGFLGFGIEPTQAAEWGYDLNKALSDVANGIWWTGVFPGIAIVLVVLGMTLVGESLNE
HHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VINPLLRTRRGEA
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]