| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627815
Identifier: 169627815
GI number: 169627815
Start: 716789
End: 717319
Strand: Reverse
Name: 169627815
Synonym: MAB_0714c
Alternate gene names: NA
Gene position: 717319-716789 (Counterclockwise)
Preceding gene: 169627816
Following gene: 169627813
Centisome position: 14.16
GC content: 61.58
Gene sequence:
>531_bases TTGCTATCGGCTGAACGGCGCTTTCAGTTCCCTCGCCGCCTTGAGGAAATCTCCGCGGTCTCCGCCTTCGAACTACCGTC AGCGGACGACATCGAACCGGGCAATCACGCACCCCTTGCCTTCGCCGACACTGCCCGTCGACTCGATGCCCTGAGCATCG GCGACACATTCACCACCCAAATCGGAATCGCCGGGCTGATGACGCCAATCGAATGGGTCGTCGTCGAAATCACCGATACA GCAACACTTCTCGCTGTACGGCGGGGGCGCTACCAGGTAGCCTCGCAGGGGCTGCAGGGCGCCAACGCGACCGTCGTACT CAATGTCTACGAACAGAAGCCATCAGTCGTCGCGGAGCTGTTCGTGCTGATCGACGAAGTGATCCTGACCGGCGAACTTC AGCAATCCTTCATGGCAGCCCTCGAGGGCATGATCGACACTCACATCGAACTCATCAGGACCGGCGTTCCCGGGCTGCGA GACGTGATCGTCGACGAGGCGTACCCGCCGCCGCGCGGGCAAGGACGTTAG
Upstream 100 bases:
>100_bases GGAACGGAACACGTTCGGTCAAGTAATTCGCCCAATTCGGTCATCGCACGTGCCCCGTCGATCACATAGCCTCGGGCCAA CCAAACCTGAGGGGGGAAGT
Downstream 100 bases:
>100_bases CGCGCCTGGACGGATTCCGAACTCTCGCTCGATGTCTCCCGCGCAGTGGCCGCAAGCATGTGCTCGACCACGTTCTTGCC GAGCGCGGTCTCCTTGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLSAERRFQFPRRLEEISAVSAFELPSADDIEPGNHAPLAFADTARRLDALSIGDTFTTQIGIAGLMTPIEWVVVEITDT ATLLAVRRGRYQVASQGLQGANATVVLNVYEQKPSVVAELFVLIDEVILTGELQQSFMAALEGMIDTHIELIRTGVPGLR DVIVDEAYPPPRGQGR
Sequences:
>Translated_176_residues MLSAERRFQFPRRLEEISAVSAFELPSADDIEPGNHAPLAFADTARRLDALSIGDTFTTQIGIAGLMTPIEWVVVEITDT ATLLAVRRGRYQVASQGLQGANATVVLNVYEQKPSVVAELFVLIDEVILTGELQQSFMAALEGMIDTHIELIRTGVPGLR DVIVDEAYPPPRGQGR >Mature_176_residues MLSAERRFQFPRRLEEISAVSAFELPSADDIEPGNHAPLAFADTARRLDALSIGDTFTTQIGIAGLMTPIEWVVVEITDT ATLLAVRRGRYQVASQGLQGANATVVLNVYEQKPSVVAELFVLIDEVILTGELQQSFMAALEGMIDTHIELIRTGVPGLR DVIVDEAYPPPRGQGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19203; Mature: 19203
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSAERRFQFPRRLEEISAVSAFELPSADDIEPGNHAPLAFADTARRLDALSIGDTFTTQ CCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHH IGIAGLMTPIEWVVVEITDTATLLAVRRGRYQVASQGLQGANATVVLNVYEQKPSVVAEL HHHHHHHCCEEEEEEEECCHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH FVLIDEVILTGELQQSFMAALEGMIDTHIELIRTGVPGLRDVIVDEAYPPPRGQGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLSAERRFQFPRRLEEISAVSAFELPSADDIEPGNHAPLAFADTARRLDALSIGDTFTTQ CCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHH IGIAGLMTPIEWVVVEITDTATLLAVRRGRYQVASQGLQGANATVVLNVYEQKPSVVAEL HHHHHHHCCEEEEEEEECCHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH FVLIDEVILTGELQQSFMAALEGMIDTHIELIRTGVPGLRDVIVDEAYPPPRGQGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA