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The map label for this gene is 169627783

Identifier: 169627783

GI number: 169627783

Start: 683519

End: 684133

Strand: Direct

Name: 169627783

Synonym: MAB_0681

Alternate gene names: NA

Gene position: 683519-684133 (Clockwise)

Preceding gene: 169627780

Following gene: 169627784

Centisome position: 13.49

GC content: 65.69

Gene sequence:

>615_bases
GTGATCTACGGTGACCTTGTGAGCCCCACCCAGGCCGAGCGCCGCGAGTCGACCATTGCCAGGCTGCTCGACTCCGGTAT
CGACACCATCGCCGAACTGGGGTATTCACGCGCCTCGGTGCAGCGCATCGCCAAACGAGCCGGGTTGTCCTACGGGGCGT
TATTCCGGCACTTCCCGACAGTTGGCGATTTCATGGCAGAAGTGGCGCGCGAGACGCTGCGCCGTCAGCTGGCGACCGTG
CGGGCGCAGTTCGACCGGGCCGGGGACCGGCTGGCGGAATTCGAGGACGTGATGGCCGTGATGCGCTCACTCAAAGAAGA
GCCCATCAACGCCGTGCTCTATGAGCTCATGGTGGCCGCGCGCACCGATGAGCAGCTGCGCGAGACGCTGCAGGTCGCGG
TGGCCGAGTACGGCGCGCAGATGGTCGAGCTCGCGCGGTCGGTGCCGGGGACGGACCGATTGTCCGAGTCCGAGCTCATC
ACGCTGGTCTTCATGATCACCGACATGTTCGACGGCGAGGCGTTGGTGCAGACGTTGCGCCCATATCCGGAGCTGGTCGC
CGGACGTGACGAGTTACTGGCCAAGTTGCTGCGAGGGTACCGCCCGGATGCCTAG

Upstream 100 bases:

>100_bases
ATGAGGTCGTAAACGCTCATGGGGGCTGCCCTTCGTTGGGTGATGAGCCCAGTCTAGAAAAGATGGCAACCGATCACAAT
CCTTAGTGACATGGTCCAAC

Downstream 100 bases:

>100_bases
CCTGCCCCGTGGCCGGGGTGGCCCCGACCGCTAGGGTCTGGTGCATGGAGTCCTTGCGTGTCCTCATTATTGGATCCGGT
GGCCGTGAACACGCTTTGGC

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MIYGDLVSPTQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKRAGLSYGALFRHFPTVGDFMAEVARETLRRQLATV
RAQFDRAGDRLAEFEDVMAVMRSLKEEPINAVLYELMVAARTDEQLRETLQVAVAEYGAQMVELARSVPGTDRLSESELI
TLVFMITDMFDGEALVQTLRPYPELVAGRDELLAKLLRGYRPDA

Sequences:

>Translated_204_residues
MIYGDLVSPTQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKRAGLSYGALFRHFPTVGDFMAEVARETLRRQLATV
RAQFDRAGDRLAEFEDVMAVMRSLKEEPINAVLYELMVAARTDEQLRETLQVAVAEYGAQMVELARSVPGTDRLSESELI
TLVFMITDMFDGEALVQTLRPYPELVAGRDELLAKLLRGYRPDA
>Mature_204_residues
MIYGDLVSPTQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKRAGLSYGALFRHFPTVGDFMAEVARETLRRQLATV
RAQFDRAGDRLAEFEDVMAVMRSLKEEPINAVLYELMVAARTDEQLRETLQVAVAEYGAQMVELARSVPGTDRLSESELI
TLVFMITDMFDGEALVQTLRPYPELVAGRDELLAKLLRGYRPDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22832; Mature: 22832

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYGDLVSPTQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKRAGLSYGALFRHFPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCC
VGDFMAEVARETLRRQLATVRAQFDRAGDRLAEFEDVMAVMRSLKEEPINAVLYELMVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RTDEQLRETLQVAVAEYGAQMVELARSVPGTDRLSESELITLVFMITDMFDGEALVQTLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHC
PYPELVAGRDELLAKLLRGYRPDA
CHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIYGDLVSPTQAERRESTIARLLDSGIDTIAELGYSRASVQRIAKRAGLSYGALFRHFPT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCC
VGDFMAEVARETLRRQLATVRAQFDRAGDRLAEFEDVMAVMRSLKEEPINAVLYELMVAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RTDEQLRETLQVAVAEYGAQMVELARSVPGTDRLSESELITLVFMITDMFDGEALVQTLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHC
PYPELVAGRDELLAKLLRGYRPDA
CHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]