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The map label for this gene is uidR [C]

Identifier: 169627750

GI number: 169627750

Start: 649146

End: 649709

Strand: Direct

Name: uidR [C]

Synonym: MAB_0647

Alternate gene names: 169627750

Gene position: 649146-649709 (Clockwise)

Preceding gene: 169627746

Following gene: 169627751

Centisome position: 12.81

GC content: 65.25

Gene sequence:

>564_bases
ATGGATCAACCCGCCCGTCCGTTACGGGCAGACGCTGCCCGCAACCGTGCGCGGGTGTTGGAGGTCGCCTACCAAACCTT
CGCCGAAGAGGGGCTTGGGGTGCCTATCGATGAGATCGCGCGACGCGCCGGCGTGGGTGCGGGGACGGTGTATCGGCATT
TCCCGGCCAAGGAGGACCTGTATCGCGCGATTGCCGAGGATCGCATGGGCAGCGTGATCGACAAGGGCCGCGAGCTGCTG
GCGGCCGTCGACCCCGGCGAAGCGCTCTTCGAATTTCTGCGTTCGATGATGGATTGGGGCGGCACCGATCAGGGCTTGGT
GGATGCCTTGTCAGGTGCGGGCATCGACGTTCAGGCGCTCATTCCGCATATCGAGGAGTCCTTCTATGCGGTCTTGGGTG
ATCTGCTGCGAGCCGCGCAGCAGGCGGGCACGGTGCGCTCCGATGTGGGGGTGCACGAGGTGAAGGCACTCCTGGTCGGT
TGCCAGGCCATGCAGAGCTACAACAAGGATGTCTCGCGCCAGGTGACTGACGTCGTGTTCGACGGACTGCGGCCGCGCCC
GTAG

Upstream 100 bases:

>100_bases
TGGGTGCTCCTTGATAGTCTGTCAGTAACCGGGGCGGTTACTCCGCTTGTAAATATACGGAACGCTCGCCCCGTTTTGTC
AAGGCGTCAAGGAGTGTGAG

Downstream 100 bases:

>100_bases
TCAGGGGCGGTTAGCTTCGCTACCTTGAGTGAGTCGGAGGTAGCAAATGTCATTTCGTCGATGGTCGGTGTCGGTGTCGG
TGCTGTTGCTGGCCGTTGGC

Product: transcriptional regulator TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Regulator; TetR Family Transcriptional Regulatory Protein; Transcription Regulator Protein; TetR Family Protein Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; TetR Family Regulator; TetR/AcrR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEIARRAGVGAGTVYRHFPAKEDLYRAIAEDRMGSVIDKGRELL
AAVDPGEALFEFLRSMMDWGGTDQGLVDALSGAGIDVQALIPHIEESFYAVLGDLLRAAQQAGTVRSDVGVHEVKALLVG
CQAMQSYNKDVSRQVTDVVFDGLRPRP

Sequences:

>Translated_187_residues
MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEIARRAGVGAGTVYRHFPAKEDLYRAIAEDRMGSVIDKGRELL
AAVDPGEALFEFLRSMMDWGGTDQGLVDALSGAGIDVQALIPHIEESFYAVLGDLLRAAQQAGTVRSDVGVHEVKALLVG
CQAMQSYNKDVSRQVTDVVFDGLRPRP
>Mature_187_residues
MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEIARRAGVGAGTVYRHFPAKEDLYRAIAEDRMGSVIDKGRELL
AAVDPGEALFEFLRSMMDWGGTDQGLVDALSGAGIDVQALIPHIEESFYAVLGDLLRAAQQAGTVRSDVGVHEVKALLVG
CQAMQSYNKDVSRQVTDVVFDGLRPRP

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20309; Mature: 20309

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEIARRAGVGAGTVYRHFPAKEDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHH
YRAIAEDRMGSVIDKGRELLAAVDPGEALFEFLRSMMDWGGTDQGLVDALSGAGIDVQAL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHH
IPHIEESFYAVLGDLLRAAQQAGTVRSDVGVHEVKALLVGCQAMQSYNKDVSRQVTDVVF
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLRPRP
HCCCCCC
>Mature Secondary Structure
MDQPARPLRADAARNRARVLEVAYQTFAEEGLGVPIDEIARRAGVGAGTVYRHFPAKEDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHCCCHHHH
YRAIAEDRMGSVIDKGRELLAAVDPGEALFEFLRSMMDWGGTDQGLVDALSGAGIDVQAL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHH
IPHIEESFYAVLGDLLRAAQQAGTVRSDVGVHEVKALLVGCQAMQSYNKDVSRQVTDVVF
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLRPRP
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA