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The map label for this gene is ydfG [C]

Identifier: 169627746

GI number: 169627746

Start: 644843

End: 645757

Strand: Direct

Name: ydfG [C]

Synonym: MAB_0643

Alternate gene names: 169627746

Gene position: 644843-645757 (Clockwise)

Preceding gene: 169627745

Following gene: 169627750

Centisome position: 12.73

GC content: 63.06

Gene sequence:

>915_bases
GTGACGGTGCACTGGACGACAGCCGATATTCCCGACCAGACCGGACGTGTTGCCGTCGTCACCGGCGCCAACACCGGCCT
CGGTCTGGAGACTGCGCGTGCCTTGGCCGCTGCGGGAGCCCAGGTGGTTCTTGCGGTGCGCGACCCCGACAAGGGAGCCG
CCGCGGCCGACGATATTACGAAGGGTGCGGCTGGGAGCAACCTCGCGCTACAGCGGCTGGACCTGTCGTCGCTTTCGGAT
ATCAGGTCCGCCGCCCGACAGCTGGGTGCCGACTATCCACGGATCGATCTCCTCATCAACAACGCGGGTGTGATGTATCC
GCCGAAGAGCCTCACGGCCGACGGGTTTGAACTGCAATTCGGCACCAACCATCTGGGGCATTTCGCACTCACCGGGTTGC
TGCTGGAAAATCTCACCGCAGTGCCTGACTCACGCGTTGTCATCGTCAGCAGCAACGGCCATAAATTCAGGGCAGCAATA
CATTTCGATGATTTGCAGTGGGAGCGGGGTTACAGCAGGGTGGGGGCCTATGCGCAATCCAAGCTCGCGAACCTGCTGTT
CACCTATGAGCTGCAGCGACGTCTCCAGGCTGCTGGAGCCGAGACCGTGGCGCTTGCCGCACATCCGGGTGCATCGGGCA
CCGAGCTGATGCGGCACATCACATTCGGCCCGGAGGCGCTCACCGCGGCGGCACTGAAAATCGCACAGAGCCCGGCAATG
GGAGCGCTGCCCAGTCTGCGTGCCGCCACAGACCCGGCCGCACAGGGCGGCCAGTACTACGGGCCTTCAGGTTTTGGTGA
GTTCCGCGGTTACCCGAAGGTCGTCAGGTCGAGCAAGCAGTCTCACGATAAGGTTCTGCAACAACGGCTTTGGTCTGTGT
CGGAGGAGCTGACCGGCGTTCGGTTCCCGGTCTAA

Upstream 100 bases:

>100_bases
CTCAGAGGTCGGGGGTGTCCCCGTACGCGTTGACGTGTCATCGGACGTGTCAGTGCCGATCAGCGTGGTGAATGTGAGGG
ATCTGGGGCAGTATGCAAAC

Downstream 100 bases:

>100_bases
ACGAAGAAGTTGTCGTGGTCGATGAACCACTGGGTGCGCTGGTCATCGGTCATGTCGGCGAGTGCACCGAAGCCCTCGAA
GTATTTCTGTCGGGGTGCTC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTVHWTTADIPDQTGRVAVVTGANTGLGLETARALAAAGAQVVLAVRDPDKGAAAADDITKGAAGSNLALQRLDLSSLSD
IRSAARQLGADYPRIDLLINNAGVMYPPKSLTADGFELQFGTNHLGHFALTGLLLENLTAVPDSRVVIVSSNGHKFRAAI
HFDDLQWERGYSRVGAYAQSKLANLLFTYELQRRLQAAGAETVALAAHPGASGTELMRHITFGPEALTAAALKIAQSPAM
GALPSLRAATDPAAQGGQYYGPSGFGEFRGYPKVVRSSKQSHDKVLQQRLWSVSEELTGVRFPV

Sequences:

>Translated_304_residues
MTVHWTTADIPDQTGRVAVVTGANTGLGLETARALAAAGAQVVLAVRDPDKGAAAADDITKGAAGSNLALQRLDLSSLSD
IRSAARQLGADYPRIDLLINNAGVMYPPKSLTADGFELQFGTNHLGHFALTGLLLENLTAVPDSRVVIVSSNGHKFRAAI
HFDDLQWERGYSRVGAYAQSKLANLLFTYELQRRLQAAGAETVALAAHPGASGTELMRHITFGPEALTAAALKIAQSPAM
GALPSLRAATDPAAQGGQYYGPSGFGEFRGYPKVVRSSKQSHDKVLQQRLWSVSEELTGVRFPV
>Mature_303_residues
TVHWTTADIPDQTGRVAVVTGANTGLGLETARALAAAGAQVVLAVRDPDKGAAAADDITKGAAGSNLALQRLDLSSLSDI
RSAARQLGADYPRIDLLINNAGVMYPPKSLTADGFELQFGTNHLGHFALTGLLLENLTAVPDSRVVIVSSNGHKFRAAIH
FDDLQWERGYSRVGAYAQSKLANLLFTYELQRRLQAAGAETVALAAHPGASGTELMRHITFGPEALTAAALKIAQSPAMG
ALPSLRAATDPAAQGGQYYGPSGFGEFRGYPKVVRSSKQSHDKVLQQRLWSVSEELTGVRFPV

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI225579078, Length=306, Percent_Identity=42.483660130719, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI166795268, Length=295, Percent_Identity=42.3728813559322, Blast_Score=188, Evalue=5e-48,
Organism=Homo sapiens, GI186928839, Length=307, Percent_Identity=42.671009771987, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI10190746, Length=304, Percent_Identity=37.171052631579, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI193804850, Length=296, Percent_Identity=37.1621621621622, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI19923931, Length=262, Percent_Identity=41.6030534351145, Blast_Score=154, Evalue=8e-38,
Organism=Homo sapiens, GI146231950, Length=295, Percent_Identity=36.9491525423729, Blast_Score=134, Evalue=8e-32,
Organism=Homo sapiens, GI7706523, Length=300, Percent_Identity=32.6666666666667, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI13375997, Length=167, Percent_Identity=31.1377245508982, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193207620, Length=303, Percent_Identity=32.3432343234323, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17532805, Length=303, Percent_Identity=33.003300330033, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17558006, Length=295, Percent_Identity=31.5254237288136, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17532791, Length=305, Percent_Identity=30.1639344262295, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71992402, Length=298, Percent_Identity=29.1946308724832, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17505416, Length=265, Percent_Identity=33.2075471698113, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17535059, Length=298, Percent_Identity=30.8724832214765, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI72001364, Length=255, Percent_Identity=32.5490196078431, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115533174, Length=289, Percent_Identity=29.0657439446367, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115533172, Length=289, Percent_Identity=29.0657439446367, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI32565532, Length=210, Percent_Identity=31.4285714285714, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324820, Length=294, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324148, Length=235, Percent_Identity=28.936170212766, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19921754, Length=296, Percent_Identity=42.9054054054054, Blast_Score=194, Evalue=5e-50,
Organism=Drosophila melanogaster, GI22024069, Length=296, Percent_Identity=43.2432432432432, Blast_Score=194, Evalue=6e-50,
Organism=Drosophila melanogaster, GI28573296, Length=296, Percent_Identity=41.8918918918919, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI45554248, Length=253, Percent_Identity=47.4308300395257, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24640117, Length=253, Percent_Identity=47.4308300395257, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI161076371, Length=296, Percent_Identity=38.8513513513513, Blast_Score=177, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24586328, Length=294, Percent_Identity=38.7755102040816, Blast_Score=174, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24656154, Length=266, Percent_Identity=37.218045112782, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI19922628, Length=266, Percent_Identity=37.218045112782, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI20129347, Length=297, Percent_Identity=35.3535353535354, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24647946, Length=251, Percent_Identity=32.2709163346614, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI45553409, Length=251, Percent_Identity=31.4741035856574, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24647948, Length=251, Percent_Identity=31.4741035856574, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24647931, Length=310, Percent_Identity=32.5806451612903, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32173; Mature: 32042

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVHWTTADIPDQTGRVAVVTGANTGLGLETARALAAAGAQVVLAVRDPDKGAAAADDIT
CEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH
KGAAGSNLALQRLDLSSLSDIRSAARQLGADYPRIDLLINNAGVMYPPKSLTADGFELQF
CCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCEEEEE
GTNHLGHFALTGLLLENLTAVPDSRVVIVSSNGHKFRAAIHFDDLQWERGYSRVGAYAQS
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH
KLANLLFTYELQRRLQAAGAETVALAAHPGASGTELMRHITFGPEALTAAALKIAQSPAM
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC
GALPSLRAATDPAAQGGQYYGPSGFGEFRGYPKVVRSSKQSHDKVLQQRLWSVSEELTGV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
RFPV
CCCC
>Mature Secondary Structure 
TVHWTTADIPDQTGRVAVVTGANTGLGLETARALAAAGAQVVLAVRDPDKGAAAADDIT
EEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH
KGAAGSNLALQRLDLSSLSDIRSAARQLGADYPRIDLLINNAGVMYPPKSLTADGFELQF
CCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCCCEEEEE
GTNHLGHFALTGLLLENLTAVPDSRVVIVSSNGHKFRAAIHFDDLQWERGYSRVGAYAQS
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH
KLANLLFTYELQRRLQAAGAETVALAAHPGASGTELMRHITFGPEALTAAALKIAQSPAM
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCC
GALPSLRAATDPAAQGGQYYGPSGFGEFRGYPKVVRSSKQSHDKVLQQRLWSVSEELTGV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
RFPV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]