| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mhpF [C]
Identifier: 169627728
GI number: 169627728
Start: 624440
End: 625348
Strand: Direct
Name: mhpF [C]
Synonym: MAB_0625
Alternate gene names: 169627728
Gene position: 624440-625348 (Clockwise)
Preceding gene: 169627727
Following gene: 169627729
Centisome position: 12.32
GC content: 62.6
Gene sequence:
>909_bases GTGGCGTCAAAGGCATCTGTAGCGATCGTCGGTTCGGGAAACATCAGCACCGACCTGCTGTACAAATTGCAGCGTTCCGA GTGGCTGGAGCCGCGGTGGATGATCGGCATCGACCCCGAGTCCGAAGGTCTCAAGCGTGCCCGCGGTTTCGGTCTGGAAA CCTCGCACGAGGGTGTGGACTGGTTGCTTGGGCAGGACGAGAAGCCGGATCTGGTCTTCGAGGCAACGTCCGCCTACGTG CACAAGGCCGCCGCGCCACGCTATGAGGAAGCGGGCATCCGGGCCATCGATCTGACTCCCGCGGCGGTGGGACCAGCCGT TGTGCCGCCCGCGAATCTGCGCGCCCACCTTGATGCTCCGAACGTCAACATGATCACCTGTGGTGGCCAGGCGACGATTC CGATCGTGTACGCGGTGTCGCGCGTTGTCGAGGTGCCTTACGCCGAGATCGTCGCCTCGGTCGCCTCGGTGTCCGCAGGA CCCGGAACGCGCGCCAACATCGACGAGTTCACCAAGACCACGTCCAAGGGGGTGGAGGTGATCGGAGGCGCCAAGCGCGG AAAGGCGATCATCATCCTGAACCCCGCGGATCCGCCGATGATCATGCGCGACACAATTTTCTGCGCAATTCCTGAGGACG CGGACCGTGCGGCGATTGCCGCGTCGATTCACGATGTGGTGAGCCAGGTTCAGCAGTACGTGCCCGGATACCGGCTGCTC AATGAGCCGCAGTTCGATGAGCCGTCGGTGGTCAACGGCGGCAACCATGTCGTCACTACCTTCGTCGAGGTTGAGGGCGC CGGTGACTTCTTGCCGCCGTATGCCGGAAACCTGGACATCATGACCGCGGCCGCGACCAAGGTCGGCGAGGAAATCGCCA AAGAACTTCTATCTGCAAAGGTTTCGTGA
Upstream 100 bases:
>100_bases TCGTGCACGCGGGCGTTCGACGCGCATCCGGGCGACGAGTTTTTAGCCGAGTTCGCCGGACTTGGTTCGGTCCGACTGGC TTTCGAGTAGAGGAGAGATT
Downstream 100 bases:
>100_bases AATGGGTTCGGACACCAGCACTCAGCTCTTGGGCACCGACGGCATCTTCTTCGACGCCGCATGGGACGTGCGGGTCACCG ATACGTCGTTGCGTGATGGC
Product: acetaldehyde dehydrogenase
Products: NA
Alternate protein names: Acetaldehyde dehydrogenase [acetylating] 1
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MASKASVAIVGSGNISTDLLYKLQRSEWLEPRWMIGIDPESEGLKRARGFGLETSHEGVDWLLGQDEKPDLVFEATSAYV HKAAAPRYEEAGIRAIDLTPAAVGPAVVPPANLRAHLDAPNVNMITCGGQATIPIVYAVSRVVEVPYAEIVASVASVSAG PGTRANIDEFTKTTSKGVEVIGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRAAIAASIHDVVSQVQQYVPGYRLL NEPQFDEPSVVNGGNHVVTTFVEVEGAGDFLPPYAGNLDIMTAAATKVGEEIAKELLSAKVS
Sequences:
>Translated_302_residues MASKASVAIVGSGNISTDLLYKLQRSEWLEPRWMIGIDPESEGLKRARGFGLETSHEGVDWLLGQDEKPDLVFEATSAYV HKAAAPRYEEAGIRAIDLTPAAVGPAVVPPANLRAHLDAPNVNMITCGGQATIPIVYAVSRVVEVPYAEIVASVASVSAG PGTRANIDEFTKTTSKGVEVIGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRAAIAASIHDVVSQVQQYVPGYRLL NEPQFDEPSVVNGGNHVVTTFVEVEGAGDFLPPYAGNLDIMTAAATKVGEEIAKELLSAKVS >Mature_301_residues ASKASVAIVGSGNISTDLLYKLQRSEWLEPRWMIGIDPESEGLKRARGFGLETSHEGVDWLLGQDEKPDLVFEATSAYVH KAAAPRYEEAGIRAIDLTPAAVGPAVVPPANLRAHLDAPNVNMITCGGQATIPIVYAVSRVVEVPYAEIVASVASVSAGP GTRANIDEFTKTTSKGVEVIGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRAAIAASIHDVVSQVQQYVPGYRLLN EPQFDEPSVVNGGNHVVTTFVEVEGAGDFLPPYAGNLDIMTAAATKVGEEIAKELLSAKVS
Specific function: Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds
COG id: COG4569
COG function: function code Q; Acetaldehyde dehydrogenase (acetylating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetaldehyde dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1786547, Length=308, Percent_Identity=54.5454545454545, Blast_Score=307, Evalue=5e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACDH1_MYCA9 (B1MH39)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001701377.1 - EnsemblBacteria: EBMYCT00000005639 - GeneID: 5963161 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_0625 - GeneTree: EBGT00050000016468 - HOGENOM: HBG300125 - OMA: IGGAQRG - ProtClustDB: PRK08300 - BioCyc: MABS561007:MAB_0625-MONOMER - GO: GO:0005737 - HAMAP: MF_01657 - InterPro: IPR003361 - InterPro: IPR015426 - InterPro: IPR016040 - InterPro: IPR000534 - Gene3D: G3DSA:3.40.50.720 - PANTHER: PTHR21123 - PIRSF: PIRSF015689 - SMART: SM00859 - TIGRFAMs: TIGR03215
Pfam domain/function: PF09290 AcetDehyd-dimer; PF01118 Semialdhyde_dh
EC number: =1.2.1.10
Molecular weight: Translated: 31986; Mature: 31854
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: BINDING 277-277
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKASVAIVGSGNISTDLLYKLQRSEWLEPRWMIGIDPESEGLKRARGFGLETSHEGVD CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCC WLLGQDEKPDLVFEATSAYVHKAAAPRYEEAGIRAIDLTPAAVGPAVVPPANLRAHLDAP EECCCCCCCCEEEEHHHHHHHHHCCCCHHHCCCEEEECCCHHCCCCCCCCCCCEEEECCC NVNMITCGGQATIPIVYAVSRVVEVPYAEIVASVASVSAGPGTRANIDEFTKTTSKGVEV CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEE IGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRAAIAASIHDVVSQVQQYVPGYRLL ECCCCCCCEEEEECCCCCCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEC NEPQFDEPSVVNGGNHVVTTFVEVEGAGDFLPPYAGNLDIMTAAATKVGEEIAKELLSAK CCCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC VS CC >Mature Secondary Structure ASKASVAIVGSGNISTDLLYKLQRSEWLEPRWMIGIDPESEGLKRARGFGLETSHEGVD CCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCC WLLGQDEKPDLVFEATSAYVHKAAAPRYEEAGIRAIDLTPAAVGPAVVPPANLRAHLDAP EECCCCCCCCEEEEHHHHHHHHHCCCCHHHCCCEEEECCCHHCCCCCCCCCCCEEEECCC NVNMITCGGQATIPIVYAVSRVVEVPYAEIVASVASVSAGPGTRANIDEFTKTTSKGVEV CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEE IGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRAAIAASIHDVVSQVQQYVPGYRLL ECCCCCCCEEEEECCCCCCEEEECEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEC NEPQFDEPSVVNGGNHVVTTFVEVEGAGDFLPPYAGNLDIMTAAATKVGEEIAKELLSAK CCCCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC VS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA