Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is cyp125 [H]

Identifier: 169627716

GI number: 169627716

Start: 611858

End: 613117

Strand: Direct

Name: cyp125 [H]

Synonym: MAB_0613

Alternate gene names: 169627716

Gene position: 611858-613117 (Clockwise)

Preceding gene: 169627714

Following gene: 169627717

Centisome position: 12.07

GC content: 61.9

Gene sequence:

>1260_bases
GTGGTGCACCCCAGCCTTCCCGCCGGTTTCGACTTCACCGACCCGGAAATCTACGCAGAACGGCTTCCCGTCGAGGAGCT
CAAGGAGCTTCGGAAGACGGCTCCCATTTGGTGGCAGGAACAGCCCGACGGAGTCGGCGGCTTCAACGATGGCGGCTACT
GGGTCGTCACCAAACACAAGGACGTCAAGGAGGTGTCGCTGCGCAGCGATGTCTTCTCTAGCTGGGAAAACACCGCTATC
CCGCGTTTTCAGGACGACATCACCCGCGAGGCCATCGAGCTGCAGCGATACGTCATGCTCAACATGGACGCCCCGCACCA
CACGCGGCTGCGCAAGATCATTTCCCGCGGCTTCACCCCGCGTGCCATTGGTCGTCTGCGCGACGAGCTCAACGAGCGTG
CGCAGGAGATCGCCAAGGCTGCCGCGGCGAGTGGCACCGGCGACTTCGTCGAGCAGGTGTCGTGTGAGTTGCCGCTGCAA
GCCATTGCTGGTCTGCTTGGTGTGCCGATCGAGGACCGCGGCAAGCTCTTTAACTGGTCCAACGAAATGACCTCGTACGA
CGATCCGGAATACGCCGATATCGACCCGGCGGCCTCCTCGATGGAGATCCTGGCCTATTCGATGGAGATGGCCAAGCAGA
AGGCCGAGAACCCGGGCGAGGACATCGTGACGACGCTGATCAACGCCGAGGTGGAAGGGGAGGGCAAGCTCTCCGACGAC
GAGTTCGGCTTCTTCGTGATCATGCTCGCGGTGGCAGGCAACGAGACCTCCCGCAACTCGATCACCCAGGGCATGATGGC
CTTCACCCAGTTCCCGGAGCAGTGGGAGCTGTACAAGAAGGAGCGCCCAGAGACGGCGGCCGACGAGATCGTGCGCTGGG
CCACGCCCGTGACGTCGTTCCAGCGGACCGCGCTGGAGGACACCGAACTCGACGGCGTGAAGATCAAGAAGGGTCAGCGC
GTCGTCATGATGTATCGCTCGGCGAATTTCGACGAGGATGTGTTCGAAGATCCCTTTAGCTTCAACATCATGCGTAACCC
GAACCCGCACATGGGCTTTGGCGGCAGTGGTGCGCACTACTGCATCGGTGCAAACCTGGCTCGGTTGACCATCAACCTGA
TGTTCAACGCCATCGCCGACCACATGCCGAACTTGGCACCGGCGGGTGACCCGAAGCGGTTGCAGTCCGGTTGGCTCAAC
GGCATCAAGCACTGGCAGGTCGATTTCACCGGCGCCAGTGGCTGCCCGGTTCTGCAGTAG

Upstream 100 bases:

>100_bases
TTCAATGGGGCTAGAGAGTGTCGTAGCTCACTCGGCCCTCACTAGACGCTCTAACCAGATCGTCCCTGAAAGACGCCCCG
AAAGGCCATAGGAGTTCAAC

Downstream 100 bases:

>100_bases
TTTTCAAAGGGAAACGAGCATAATGGATTTCGCTTTCGCGGAGGAGCAGCAGGCCGTCTCCGATGTGGTCGAAGCAGTGC
TTGCCGATCGCGAGTTCGTC

Product: putative cytochrome P450

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MVHPSLPAGFDFTDPEIYAERLPVEELKELRKTAPIWWQEQPDGVGGFNDGGYWVVTKHKDVKEVSLRSDVFSSWENTAI
PRFQDDITREAIELQRYVMLNMDAPHHTRLRKIISRGFTPRAIGRLRDELNERAQEIAKAAAASGTGDFVEQVSCELPLQ
AIAGLLGVPIEDRGKLFNWSNEMTSYDDPEYADIDPAASSMEILAYSMEMAKQKAENPGEDIVTTLINAEVEGEGKLSDD
EFGFFVIMLAVAGNETSRNSITQGMMAFTQFPEQWELYKKERPETAADEIVRWATPVTSFQRTALEDTELDGVKIKKGQR
VVMMYRSANFDEDVFEDPFSFNIMRNPNPHMGFGGSGAHYCIGANLARLTINLMFNAIADHMPNLAPAGDPKRLQSGWLN
GIKHWQVDFTGASGCPVLQ

Sequences:

>Translated_419_residues
MVHPSLPAGFDFTDPEIYAERLPVEELKELRKTAPIWWQEQPDGVGGFNDGGYWVVTKHKDVKEVSLRSDVFSSWENTAI
PRFQDDITREAIELQRYVMLNMDAPHHTRLRKIISRGFTPRAIGRLRDELNERAQEIAKAAAASGTGDFVEQVSCELPLQ
AIAGLLGVPIEDRGKLFNWSNEMTSYDDPEYADIDPAASSMEILAYSMEMAKQKAENPGEDIVTTLINAEVEGEGKLSDD
EFGFFVIMLAVAGNETSRNSITQGMMAFTQFPEQWELYKKERPETAADEIVRWATPVTSFQRTALEDTELDGVKIKKGQR
VVMMYRSANFDEDVFEDPFSFNIMRNPNPHMGFGGSGAHYCIGANLARLTINLMFNAIADHMPNLAPAGDPKRLQSGWLN
GIKHWQVDFTGASGCPVLQ
>Mature_419_residues
MVHPSLPAGFDFTDPEIYAERLPVEELKELRKTAPIWWQEQPDGVGGFNDGGYWVVTKHKDVKEVSLRSDVFSSWENTAI
PRFQDDITREAIELQRYVMLNMDAPHHTRLRKIISRGFTPRAIGRLRDELNERAQEIAKAAAASGTGDFVEQVSCELPLQ
AIAGLLGVPIEDRGKLFNWSNEMTSYDDPEYADIDPAASSMEILAYSMEMAKQKAENPGEDIVTTLINAEVEGEGKLSDD
EFGFFVIMLAVAGNETSRNSITQGMMAFTQFPEQWELYKKERPETAADEIVRWATPVTSFQRTALEDTELDGVKIKKGQR
VVMMYRSANFDEDVFEDPFSFNIMRNPNPHMGFGGSGAHYCIGANLARLTINLMFNAIADHMPNLAPAGDPKRLQSGWLN
GIKHWQVDFTGASGCPVLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 46963; Mature: 46963

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPSLPAGFDFTDPEIYAERLPVEELKELRKTAPIWWQEQPDGVGGFNDGGYWVVTKHK
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
DVKEVSLRSDVFSSWENTAIPRFQDDITREAIELQRYVMLNMDAPHHTRLRKIISRGFTP
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCH
RAIGRLRDELNERAQEIAKAAAASGTGDFVEQVSCELPLQAIAGLLGVPIEDRGKLFNWS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEECCC
NEMTSYDDPEYADIDPAASSMEILAYSMEMAKQKAENPGEDIVTTLINAEVEGEGKLSDD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEECCCCCCCCC
EFGFFVIMLAVAGNETSRNSITQGMMAFTQFPEQWELYKKERPETAADEIVRWATPVTSF
CCCCEEEEEEHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHH
QRTALEDTELDGVKIKKGQRVVMMYRSANFDEDVFEDPFSFNIMRNPNPHMGFGGSGAHY
HHHHCCCCCCCCEEECCCCEEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCE
CIGANLARLTINLMFNAIADHMPNLAPAGDPKRLQSGWLNGIKHWQVDFTGASGCPVLQ
EECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MVHPSLPAGFDFTDPEIYAERLPVEELKELRKTAPIWWQEQPDGVGGFNDGGYWVVTKHK
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
DVKEVSLRSDVFSSWENTAIPRFQDDITREAIELQRYVMLNMDAPHHTRLRKIISRGFTP
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCH
RAIGRLRDELNERAQEIAKAAAASGTGDFVEQVSCELPLQAIAGLLGVPIEDRGKLFNWS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEECCC
NEMTSYDDPEYADIDPAASSMEILAYSMEMAKQKAENPGEDIVTTLINAEVEGEGKLSDD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEECCCCCCCCC
EFGFFVIMLAVAGNETSRNSITQGMMAFTQFPEQWELYKKERPETAADEIVRWATPVTSF
CCCCEEEEEEHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHH
QRTALEDTELDGVKIKKGQRVVMMYRSANFDEDVFEDPFSFNIMRNPNPHMGFGGSGAHY
HHHHCCCCCCCCEEECCCCEEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCE
CIGANLARLTINLMFNAIADHMPNLAPAGDPKRLQSGWLNGIKHWQVDFTGASGCPVLQ
EECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]