| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is bp26 [H]
Identifier: 169627629
GI number: 169627629
Start: 525940
End: 526689
Strand: Reverse
Name: bp26 [H]
Synonym: MAB_0525c
Alternate gene names: 169627629
Gene position: 526689-525940 (Counterclockwise)
Preceding gene: 169627630
Following gene: 169627628
Centisome position: 10.39
GC content: 66.67
Gene sequence:
>750_bases ATGCGGGTACTAGCACGAAAAGCACTGACCCGGACTACCGCCATAGCCGGTGCCGCCGCGCTGGCGGTTCTTCTCGCCGG CTGTGGTGACGATTCCACCGGCGGGCCGGAATCCAGTCGCAACGTGACCGTTGTCGGCAAGGGCGAGGTCAAAGGCGCAC CGGATGTACTACGCGCCGACGTCGGCGTGTCCGTGACCGCCAAGGACGTGTCCGGTGCGCTGTCGCAAGCGAACCAGAAG GCACAGGCAGTGATCGACGCCGTGGTCGGCGCCGGAGTAGCCCGTGAGGATGTGCAGACCAACGAGCTGTCTATCCAGCC GGAGCAGACGTACCCGCCGGGCGGACCCACCCGTATCACCGGCTACAACGCCACCAACTCGGTGCGCATCAATGTCCGTG ACCTCAAGAAGGCCTCCGAGGTCCTGGACAAGGCGGTGCAGGCCGGCGGCGATGCCGCCCGGCTGTCCGGTGTCAGCTTC GACCTCGACAACGACGCCGACCTGATGAAGGGCGCGCGCGAACGTGCCTTCAACGACGCCAAGTCCCGTGCCGAGCAGTA CGCAGCCCTGTCGGGCTCCACGCTGGGCAAGGTGCTACGCATCGACGAATCTCACGGTTCGGTGCCTCCGCCCCCTCCGC CGATGGGCAAGCGGGCCCCCATGCAAGCCGACGCGTCATTCGCCCCACCGCTGGAGCCCGGTCAGCAGACGGTGTCCTTC CAGGTGAGCGTCATCTGGGAACTCGACTAG
Upstream 100 bases:
>100_bases TCTGGAAGATGTCGGTTCGGCATTTGCCGATCTCGGCGATCCCGAGCGCCACTGCAAGATCTTGGTGGTGCCATGAAGGT TGGGGAGGACAGGAAGTGAC
Downstream 100 bases:
>100_bases ACCATGGGCGACATCACGGTTGTCGGCCATGGCGAGGCCAGCGGCAGTCCCGACGTATTCATGGCGACCGTCGGGGTGTC GGTGCGGTCCCGCCGCATCG
Product: lipoprotein LpqG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MRVLARKALTRTTAIAGAAALAVLLAGCGDDSTGGPESSRNVTVVGKGEVKGAPDVLRADVGVSVTAKDVSGALSQANQK AQAVIDAVVGAGVAREDVQTNELSIQPEQTYPPGGPTRITGYNATNSVRINVRDLKKASEVLDKAVQAGGDAARLSGVSF DLDNDADLMKGARERAFNDAKSRAEQYAALSGSTLGKVLRIDESHGSVPPPPPPMGKRAPMQADASFAPPLEPGQQTVSF QVSVIWELD
Sequences:
>Translated_249_residues MRVLARKALTRTTAIAGAAALAVLLAGCGDDSTGGPESSRNVTVVGKGEVKGAPDVLRADVGVSVTAKDVSGALSQANQK AQAVIDAVVGAGVAREDVQTNELSIQPEQTYPPGGPTRITGYNATNSVRINVRDLKKASEVLDKAVQAGGDAARLSGVSF DLDNDADLMKGARERAFNDAKSRAEQYAALSGSTLGKVLRIDESHGSVPPPPPPMGKRAPMQADASFAPPLEPGQQTVSF QVSVIWELD >Mature_249_residues MRVLARKALTRTTAIAGAAALAVLLAGCGDDSTGGPESSRNVTVVGKGEVKGAPDVLRADVGVSVTAKDVSGALSQANQK AQAVIDAVVGAGVAREDVQTNELSIQPEQTYPPGGPTRITGYNATNSVRINVRDLKKASEVLDKAVQAGGDAARLSGVSF DLDNDADLMKGARERAFNDAKSRAEQYAALSGSTLGKVLRIDESHGSVPPPPPPMGKRAPMQADASFAPPLEPGQQTVSF QVSVIWELD
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007497 [H]
Pfam domain/function: PF04402 DUF541 [H]
EC number: NA
Molecular weight: Translated: 25728; Mature: 25728
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLARKALTRTTAIAGAAALAVLLAGCGDDSTGGPESSRNVTVVGKGEVKGAPDVLRAD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHC VGVSVTAKDVSGALSQANQKAQAVIDAVVGAGVAREDVQTNELSIQPEQTYPPGGPTRIT CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCCCCCCCCCEEEE GYNATNSVRINVRDLKKASEVLDKAVQAGGDAARLSGVSFDLDNDADLMKGARERAFNDA ECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCHHHHHHHHHHHHHHH KSRAEQYAALSGSTLGKVLRIDESHGSVPPPPPPMGKRAPMQADASFAPPLEPGQQTVSF HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QVSVIWELD EEEEEEECC >Mature Secondary Structure MRVLARKALTRTTAIAGAAALAVLLAGCGDDSTGGPESSRNVTVVGKGEVKGAPDVLRAD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHC VGVSVTAKDVSGALSQANQKAQAVIDAVVGAGVAREDVQTNELSIQPEQTYPPGGPTRIT CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCCCCCCCCCEEEE GYNATNSVRINVRDLKKASEVLDKAVQAGGDAARLSGVSFDLDNDADLMKGARERAFNDA ECCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCHHHHHHHHHHHHHHH KSRAEQYAALSGSTLGKVLRIDESHGSVPPPPPPMGKRAPMQADASFAPPLEPGQQTVSF HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE QVSVIWELD EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8748294 [H]