| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is bp26 [H]
Identifier: 169627628
GI number: 169627628
Start: 525328
End: 525936
Strand: Reverse
Name: bp26 [H]
Synonym: MAB_0524c
Alternate gene names: 169627628
Gene position: 525936-525328 (Counterclockwise)
Preceding gene: 169627629
Following gene: 169627626
Centisome position: 10.38
GC content: 68.97
Gene sequence:
>609_bases ATGGGCGACATCACGGTTGTCGGCCATGGCGAGGCCAGCGGCAGTCCCGACGTATTCATGGCGACCGTCGGGGTGTCGGT GCGGTCCCGCCGCATCGCCGGGGTGATGGCCGACGTGAAGGCCAAGGCGCGCGCGGTGATCGACGCGGTGATCGACGCCG GCGTGGCCGCCGACGATGTTCGCACCGCGTGGATGTCGGTGCACCCACAGTTCGATGGCAACCGGATCACGGGCTATGCC GCCGACAACTCGGTGCGGATCATCGTCCGGGACCTCTCGAAGGTCTCCGATGTGCTGGACAAGGCCGTCACCGCGGGAGG CGAGGCAGCGCAGCTGTCCGGAGTGAGCTTCGACCTGCAGGACAGCACCGCGCTCGCCGCACTGGCACGCGAGCGGGCAT TTTCCGATGCCAAGACCCGGGCCGAGCAGTATGCCGCTCTCGCGGGCAGAACACTGGGCAAGGTGCTGCGCATCGATGAG ACCGGCGGTACTGCCTCGCCGCATCCGCGGGCCGAGTTCGCCATGCTGCGGGCCTCGAGTGGACCACCCGTCGAGGCCGG TCAGCACGCCGTCAGCGCGGCGATCACCGTTGCGTGGGAGCTGGACTAG
Upstream 100 bases:
>100_bases GGCCCCCATGCAAGCCGACGCGTCATTCGCCCCACCGCTGGAGCCCGGTCAGCAGACGGTGTCCTTCCAGGTGAGCGTCA TCTGGGAACTCGACTAGACC
Downstream 100 bases:
>100_bases TCGGTGTAGACCCGTGGGTGCAGCGTGCCGATAAAGGGCAGATCGCGGTACCGCTCGCCGTAATCGAGTCCATAACCGAC GACGAACTCGTTCGGAATCT
Product: lipoprotein LpqG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGDITVVGHGEASGSPDVFMATVGVSVRSRRIAGVMADVKAKARAVIDAVIDAGVAADDVRTAWMSVHPQFDGNRITGYA ADNSVRIIVRDLSKVSDVLDKAVTAGGEAAQLSGVSFDLQDSTALAALARERAFSDAKTRAEQYAALAGRTLGKVLRIDE TGGTASPHPRAEFAMLRASSGPPVEAGQHAVSAAITVAWELD
Sequences:
>Translated_202_residues MGDITVVGHGEASGSPDVFMATVGVSVRSRRIAGVMADVKAKARAVIDAVIDAGVAADDVRTAWMSVHPQFDGNRITGYA ADNSVRIIVRDLSKVSDVLDKAVTAGGEAAQLSGVSFDLQDSTALAALARERAFSDAKTRAEQYAALAGRTLGKVLRIDE TGGTASPHPRAEFAMLRASSGPPVEAGQHAVSAAITVAWELD >Mature_201_residues GDITVVGHGEASGSPDVFMATVGVSVRSRRIAGVMADVKAKARAVIDAVIDAGVAADDVRTAWMSVHPQFDGNRITGYAA DNSVRIIVRDLSKVSDVLDKAVTAGGEAAQLSGVSFDLQDSTALAALARERAFSDAKTRAEQYAALAGRTLGKVLRIDET GGTASPHPRAEFAMLRASSGPPVEAGQHAVSAAITVAWELD
Specific function: Unknown
COG id: COG2968
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007497 [H]
Pfam domain/function: PF04402 DUF541 [H]
EC number: NA
Molecular weight: Translated: 20916; Mature: 20784
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDITVVGHGEASGSPDVFMATVGVSVRSRRIAGVMADVKAKARAVIDAVIDAGVAADDV CCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RTAWMSVHPQFDGNRITGYAADNSVRIIVRDLSKVSDVLDKAVTAGGEAAQLSGVSFDLQ HHHHEEECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECC DSTALAALARERAFSDAKTRAEQYAALAGRTLGKVLRIDETGGTASPHPRAEFAMLRASS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHEEEEECCC GPPVEAGQHAVSAAITVAWELD CCCCCCCHHHEEEEEEEEEECC >Mature Secondary Structure GDITVVGHGEASGSPDVFMATVGVSVRSRRIAGVMADVKAKARAVIDAVIDAGVAADDV CCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RTAWMSVHPQFDGNRITGYAADNSVRIIVRDLSKVSDVLDKAVTAGGEAAQLSGVSFDLQ HHHHEEECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECC DSTALAALARERAFSDAKTRAEQYAALAGRTLGKVLRIDETGGTASPHPRAEFAMLRASS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHEEEEECCC GPPVEAGQHAVSAAITVAWELD CCCCCCCHHHEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8748294 [H]