| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627540
Identifier: 169627540
GI number: 169627540
Start: 437973
End: 438659
Strand: Direct
Name: 169627540
Synonym: MAB_0436
Alternate gene names: NA
Gene position: 437973-438659 (Clockwise)
Preceding gene: 169627537
Following gene: 169627543
Centisome position: 8.64
GC content: 60.84
Gene sequence:
>687_bases GTGTTCGAAACTGATTCTGACTTTGATCCCGATGAGACGGTGTCCACGCTTGCCCTGGATGTCATTGATGAGCTGCGCAT GAAAATGCTCGAATGCCTCCTGGTATTGCACACCTTGCCTGATGAGGCTGATCTGAATTTCACGGATTTAGCCAACGACA TCTTGGCCGCGCACCGCGGCAGCCTGGAGGCCTACCAGGCGGCCAGCATCGTGCATCAGGGCGCCGAACTCGATGAGCGG TGGGGCAACAGTTTGTCGAGGCCGAAGGCTATTTTTGCACGGCACAACGCCGCGGTACGGCGCGGTGCCGTGCAAGTGGC GCCGCTGCCGGCGTTATGCGATCGGCTAGAGCGTCACCTGTATCAGCTGCCGCGACCCGACCGGACCCAGACAGTGGCTG GGCAGCGTCCCAAATGCGCGGCCGTGGTCAAGACAACGGGCCAGGACTGCACCAACTCGGCGATCTACCTTGGTTCGGGA ATGTTTGGCGCACATTGTTATTCGCACGCCACTGCTGCCGAGCGTGAGCAGTATCGGGATCACCACGAGCGAAACGACGC CCTGCAGGCCCGCTCCCACACCGACCTGCGCAACCTGCAGCGCGCGGTCGGCCAGAAGATCGCTGCTCACTGGATTGCTA CCCGCGAGCAACGCGTGCAATGGATCAACGATATCGTGCTCAACTGA
Upstream 100 bases:
>100_bases ACACGCTCGGGATCGTTCTGACTCGGTCGCGTGGGCACGCACCCAAGTAATGAGGCGCCCGTACCAAAAGTCTGCCCTAC TAGTAGTACATTGCTGCATC
Downstream 100 bases:
>100_bases ATAGCTATCCCAATGCTGCTGGCCTGCAGCCACTTCGGGCAGCAGCGGGCACGCCCCTAGCGATCTGGCTAACGTGGTCG AGCCCGGATAAGCAGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MFETDSDFDPDETVSTLALDVIDELRMKMLECLLVLHTLPDEADLNFTDLANDILAAHRGSLEAYQAASIVHQGAELDER WGNSLSRPKAIFARHNAAVRRGAVQVAPLPALCDRLERHLYQLPRPDRTQTVAGQRPKCAAVVKTTGQDCTNSAIYLGSG MFGAHCYSHATAAEREQYRDHHERNDALQARSHTDLRNLQRAVGQKIAAHWIATREQRVQWINDIVLN
Sequences:
>Translated_228_residues MFETDSDFDPDETVSTLALDVIDELRMKMLECLLVLHTLPDEADLNFTDLANDILAAHRGSLEAYQAASIVHQGAELDER WGNSLSRPKAIFARHNAAVRRGAVQVAPLPALCDRLERHLYQLPRPDRTQTVAGQRPKCAAVVKTTGQDCTNSAIYLGSG MFGAHCYSHATAAEREQYRDHHERNDALQARSHTDLRNLQRAVGQKIAAHWIATREQRVQWINDIVLN >Mature_228_residues MFETDSDFDPDETVSTLALDVIDELRMKMLECLLVLHTLPDEADLNFTDLANDILAAHRGSLEAYQAASIVHQGAELDER WGNSLSRPKAIFARHNAAVRRGAVQVAPLPALCDRLERHLYQLPRPDRTQTVAGQRPKCAAVVKTTGQDCTNSAIYLGSG MFGAHCYSHATAAEREQYRDHHERNDALQARSHTDLRNLQRAVGQKIAAHWIATREQRVQWINDIVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25573; Mature: 25573
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETDSDFDPDETVSTLALDVIDELRMKMLECLLVLHTLPDEADLNFTDLANDILAAHRG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC SLEAYQAASIVHQGAELDERWGNSLSRPKAIFARHNAAVRRGAVQVAPLPALCDRLERHL CHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHH YQLPRPDRTQTVAGQRPKCAAVVKTTGQDCTNSAIYLGSGMFGAHCYSHATAAEREQYRD HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH HHERNDALQARSHTDLRNLQRAVGQKIAAHWIATREQRVQWINDIVLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFETDSDFDPDETVSTLALDVIDELRMKMLECLLVLHTLPDEADLNFTDLANDILAAHRG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC SLEAYQAASIVHQGAELDERWGNSLSRPKAIFARHNAAVRRGAVQVAPLPALCDRLERHL CHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHH YQLPRPDRTQTVAGQRPKCAAVVKTTGQDCTNSAIYLGSGMFGAHCYSHATAAEREQYRD HHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH HHERNDALQARSHTDLRNLQRAVGQKIAAHWIATREQRVQWINDIVLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA