Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is tyrA [H]

Identifier: 169627371

GI number: 169627371

Start: 267133

End: 268092

Strand: Reverse

Name: tyrA [H]

Synonym: MAB_0266c

Alternate gene names: 169627371

Gene position: 268092-267133 (Counterclockwise)

Preceding gene: 169627374

Following gene: 169627364

Centisome position: 5.29

GC content: 70.0

Gene sequence:

>960_bases
GTGAACGCCGCCGAACACGACCACCAACGCCCCCCGATCTGCGTACTTGGCCTCGGACTCATCGGCGGCTCGCTCATGCG
CGCGGCCACCGCCGCCGGGCGGAACGTCTGGGGATACAACCGTTCGGCCGAGGGCGTCGACGCCGCGCGTACAGCCGGCT
ACGACGCCACCGCCGATCTGGATCTGGCGTTGCGGCGGGCCCGTAACGCCCAGGCCCTGATCGTGCTCGCGGTGCCGGTG
CCGGCCCTGTCCCCGCTACTGAACCGCATCGCGGAGCTCGCTCCGGAATGTCCTCTTACCGACGTCACCAGTGTGAAATC
CGCTGTCCTGCAAACGGTGTCCGAACACGGTCTGGCGCAACGATTCGTCGGCGGCCACCCCATGGCCGGTACCACGGAAT
CCGGCTGGAGCGCCGGGGATGCAGAACTTTTCCGCGACGCCACCTGGGTGGTCAGTGTGGACGACGACGTGGATCCGCAC
GTCTTCGCTCAGGTGACCCAGCTGGCCCTGGATTGCGGGTCCGTGGTGGTTCCGGCGCGCTCGGACGAGCACGATGCGGC
GGCAGCAGCCATCTCGCACCTGCCACACCTGCTCGCCGAGGCCCTGGCCGTGACCGCCGACGGGGTGCCATTGGCCTACT
CGCTGGCCGCCGGTTCATTCCGGGACGGCACCCGTGTGGCCGCCACCGACCCGTCGCTGGTGCGCGCCATGTGCGAGTCC
AATCCGCACGGCGTCCTGCCTGCCCTGGAGGAGGCGATGGCGCTGCTCGCGGCGACCTGGAACACCCTGAACGCCGAGAA
CTCGGTGGAGCTACTGGTCGAGGCCGGCCATGCCGCTCGACAGCGCTACGAGGCGCACGAGCGGTTCGATATCAGCGGCA
TCAGCCGACATGACACCGACTGGCGCGAGCAGCTGGCCGACGCCGGCCGGGCCGGCGGAGTGCTGCGGCGGGTGCCCTAG

Upstream 100 bases:

>100_bases
CCCGCGGCCTTTGCGCGCTGTGCGTCCATGGGCAATACGGTAATGCCACACCCCGTGTTGTGACCACATCCCGTTTGGTC
ACGTATGCCAACCTGGTGGG

Downstream 100 bases:

>100_bases
ATCCGGACGGCCAGTCCGGGGTATTCCAGCAGAAAACCCTCGTCATCGACGGTCACGGTGGTGTCGGCGACCGGCGAGAC
CACCTTGATGCCCGTGCCGT

Product: prephenate dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNAAEHDHQRPPICVLGLGLIGGSLMRAATAAGRNVWGYNRSAEGVDAARTAGYDATADLDLALRRARNAQALIVLAVPV
PALSPLLNRIAELAPECPLTDVTSVKSAVLQTVSEHGLAQRFVGGHPMAGTTESGWSAGDAELFRDATWVVSVDDDVDPH
VFAQVTQLALDCGSVVVPARSDEHDAAAAAISHLPHLLAEALAVTADGVPLAYSLAAGSFRDGTRVAATDPSLVRAMCES
NPHGVLPALEEAMALLAATWNTLNAENSVELLVEAGHAARQRYEAHERFDISGISRHDTDWREQLADAGRAGGVLRRVP

Sequences:

>Translated_319_residues
MNAAEHDHQRPPICVLGLGLIGGSLMRAATAAGRNVWGYNRSAEGVDAARTAGYDATADLDLALRRARNAQALIVLAVPV
PALSPLLNRIAELAPECPLTDVTSVKSAVLQTVSEHGLAQRFVGGHPMAGTTESGWSAGDAELFRDATWVVSVDDDVDPH
VFAQVTQLALDCGSVVVPARSDEHDAAAAAISHLPHLLAEALAVTADGVPLAYSLAAGSFRDGTRVAATDPSLVRAMCES
NPHGVLPALEEAMALLAATWNTLNAENSVELLVEAGHAARQRYEAHERFDISGISRHDTDWREQLADAGRAGGVLRRVP
>Mature_319_residues
MNAAEHDHQRPPICVLGLGLIGGSLMRAATAAGRNVWGYNRSAEGVDAARTAGYDATADLDLALRRARNAQALIVLAVPV
PALSPLLNRIAELAPECPLTDVTSVKSAVLQTVSEHGLAQRFVGGHPMAGTTESGWSAGDAELFRDATWVVSVDDDVDPH
VFAQVTQLALDCGSVVVPARSDEHDAAAAAISHLPHLLAEALAVTADGVPLAYSLAAGSFRDGTRVAATDPSLVRAMCES
NPHGVLPALEEAMALLAATWNTLNAENSVELLVEAGHAARQRYEAHERFDISGISRHDTDWREQLADAGRAGGVLRRVP

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 33555; Mature: 33555

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAEHDHQRPPICVLGLGLIGGSLMRAATAAGRNVWGYNRSAEGVDAARTAGYDATADL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
DLALRRARNAQALIVLAVPVPALSPLLNRIAELAPECPLTDVTSVKSAVLQTVSEHGLAQ
HHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFVGGHPMAGTTESGWSAGDAELFRDATWVVSVDDDVDPHVFAQVTQLALDCGSVVVPAR
HHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCC
SDEHDAAAAAISHLPHLLAEALAVTADGVPLAYSLAAGSFRDGTRVAATDPSLVRAMCES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHCC
NPHGVLPALEEAMALLAATWNTLNAENSVELLVEAGHAARQRYEAHERFDISGISRHDTD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCH
WREQLADAGRAGGVLRRVP
HHHHHHHCHHCCCCCCCCC
>Mature Secondary Structure
MNAAEHDHQRPPICVLGLGLIGGSLMRAATAAGRNVWGYNRSAEGVDAARTAGYDATADL
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCHH
DLALRRARNAQALIVLAVPVPALSPLLNRIAELAPECPLTDVTSVKSAVLQTVSEHGLAQ
HHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFVGGHPMAGTTESGWSAGDAELFRDATWVVSVDDDVDPHVFAQVTQLALDCGSVVVPAR
HHCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCC
SDEHDAAAAAISHLPHLLAEALAVTADGVPLAYSLAAGSFRDGTRVAATDPSLVRAMCES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHCC
NPHGVLPALEEAMALLAATWNTLNAENSVELLVEAGHAARQRYEAHERFDISGISRHDTD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCH
WREQLADAGRAGGVLRRVP
HHHHHHHCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7823907 [H]