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The map label for this gene is opuBB [H]

Identifier: 169627368

GI number: 169627368

Start: 265098

End: 265751

Strand: Direct

Name: opuBB [H]

Synonym: MAB_0263

Alternate gene names: 169627368

Gene position: 265098-265751 (Clockwise)

Preceding gene: 169627367

Following gene: 169627369

Centisome position: 5.23

GC content: 62.84

Gene sequence:

>654_bases
ATGCGCTACCTCTTTACTCATCTCGGCGACGCGTGGCAGCTGTCGTTGATCCACTTGCGGCTATCGCTGGTGCCGATTCT
TATCGGACTGGCCATCGCCATACCGTGTGGCGCATTGCTTCACCGGCGCCGGACGGTACGGCGGGTGACCACGGTGATCG
CGAGCATCGTGTTCACCATCCCCTCGCTGGCGTTGTTCGTCGCCTTACCGCTGATCATTCCCACTCGGATACTCGATGAG
GCCAATGTGATGGTCGCATTGACGCTCTACACCACCGCGCTGCTGATCCGCGCGGTCCCGGAGGCACTCGACGCCATCGC
CCCGCAAGTGCGTGACGCGGCCACCGCGGTGGGATACCGCCCGCTGGCCCGTCTGGTCCGGGTTGAGCTGCCGCTTTCCA
TCCCGGTGTTGGTCGCGGGTTTGAGAGTGGTTGCCGTCACCAACATTTCGATGGTCTCGGTGGGATCGGTAATCGGCATC
GGTGGTCTGGGCACATGGTTCACCGAGGGCTACCAAGCCAACAAGAGCAGCCAGATCATCGCCGGAATCGTCGCGATCTT
TCTGCTGGCGGTCATCGTGGATTCACTGCTGGTGGTTCTGGGGCGCGTGGCGACACCCTGGGCCAGGGCGACGAAAACCG
CTGGTGCCACGTGA

Upstream 100 bases:

>100_bases
GGGGTGGCCATCGATGCTGATGGGCGGGTACGTGGTGGAGTCCGCGGCGACGACGTACTGACGGCCTTGGACCGCCAGCG
CCGCAACGGGCAGCGATGAT

Downstream 100 bases:

>100_bases
ATTTTCTCTCCAACGCACTCGGCTACATATTCACCGCCTCCCATTGGGCGGGCAGTAGCGGCTTGGGTGTGCGGATCGGC
GAGCACCTGGAGTACACGGC

Product: osmoprotectant ABC transporter ProW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTIPSLALFVALPLIIPTRILDE
ANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYRPLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGI
GGLGTWFTEGYQANKSSQIIAGIVAIFLLAVIVDSLLVVLGRVATPWARATKTAGAT

Sequences:

>Translated_217_residues
MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTIPSLALFVALPLIIPTRILDE
ANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYRPLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGI
GGLGTWFTEGYQANKSSQIIAGIVAIFLLAVIVDSLLVVLGRVATPWARATKTAGAT
>Mature_217_residues
MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTIPSLALFVALPLIIPTRILDE
ANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYRPLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGI
GGLGTWFTEGYQANKSSQIIAGIVAIFLLAVIVDSLLVVLGRVATPWARATKTAGAT

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=196, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23081; Mature: 23081

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTI
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLALFVALPLIIPTRILDEANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGIGGLGTWFTEGYQANKSSQII
HHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHH
AGIVAIFLLAVIVDSLLVVLGRVATPWARATKTAGAT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure
MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTI
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLALFVALPLIIPTRILDEANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGIGGLGTWFTEGYQANKSSQII
HHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHH
AGIVAIFLLAVIVDSLLVVLGRVATPWARATKTAGAT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592481; 10216873; 9384377 [H]