| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627309
Identifier: 169627309
GI number: 169627309
Start: 213610
End: 214128
Strand: Reverse
Name: 169627309
Synonym: MAB_0204c
Alternate gene names: NA
Gene position: 214128-213610 (Counterclockwise)
Preceding gene: 169627310
Following gene: 169627308
Centisome position: 4.23
GC content: 66.47
Gene sequence:
>519_bases ATGACCAATCCCGGTCATGACGAGGACGACGACCAGGTGATCATCCTGGGCGCAGACGACTCCGACAAGGGTGCCGACGG CCTGGACGATGATCTGTCGGTCACTGATCTCGTCGAACAGCCTGCCAAGGTGATGCGCATCGGCACGATGATCAAGCAGC TGCTCGAGGAAGTGCGCGCGGCCCCTCTCGACGACGCCAGCCGTTCCCGGCTGCGCGAGATCCACGCCACCTCCATCCGC GAGCTTGAGGAGGGGCTGGCCCCCGAGCTGCGCGAGGAACTGGAGCGTCTGGCGTTGCCCTTCAATGAGGACACCATCCC CTCCGACGCGGAGCTGCGCATCGCGCAGGCACAGCTGGTCGGCTGGCTGGAGGGTCTGTTCCACGGTATCCAGACCGCCC TCTTCGCCCAGCAGATGGCGGCCCGCGCACAGCTGCAGCAGATGCGCAAAGGAGCTCTGCCCCCAGGGCTTTCGGTTCCC GCACAGGGCGGCGGCAGCGGCACCGGCCAGTACCTGTAA
Upstream 100 bases:
>100_bases CGTTGGACATATCCCGATCATGGAGAAAGCTGTACGACAACGGCGCCGCCCAGATCTACGAATGGGTTGGCGACCGGAAA CCAGACGCGGAAGGTGACAA
Downstream 100 bases:
>100_bases GTCCGAAACATGGTCAGTATCCAAACTCACCAGGCGTGGGTGGAATTCCCCATATTCGACGCCAAGTCACGCTCGCTCAA GAAGGCGTTCCTGGGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRSRLREIHATSIR ELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVP AQGGGSGTGQYL
Sequences:
>Translated_172_residues MTNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRSRLREIHATSIR ELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVP AQGGGSGTGQYL >Mature_171_residues TNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRSRLREIHATSIRE LEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVPA QGGGSGTGQYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0115 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019695 [H]
Pfam domain/function: PF10759 DUF2587 [H]
EC number: NA
Molecular weight: Translated: 18636; Mature: 18505
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRA CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC APLDDASRSRLREIHATSIRELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLV CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH GWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVPAQGGGSGTGQYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRA CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC APLDDASRSRLREIHATSIRELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLV CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH GWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVPAQGGGSGTGQYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]