Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169627309

Identifier: 169627309

GI number: 169627309

Start: 213610

End: 214128

Strand: Reverse

Name: 169627309

Synonym: MAB_0204c

Alternate gene names: NA

Gene position: 214128-213610 (Counterclockwise)

Preceding gene: 169627310

Following gene: 169627308

Centisome position: 4.23

GC content: 66.47

Gene sequence:

>519_bases
ATGACCAATCCCGGTCATGACGAGGACGACGACCAGGTGATCATCCTGGGCGCAGACGACTCCGACAAGGGTGCCGACGG
CCTGGACGATGATCTGTCGGTCACTGATCTCGTCGAACAGCCTGCCAAGGTGATGCGCATCGGCACGATGATCAAGCAGC
TGCTCGAGGAAGTGCGCGCGGCCCCTCTCGACGACGCCAGCCGTTCCCGGCTGCGCGAGATCCACGCCACCTCCATCCGC
GAGCTTGAGGAGGGGCTGGCCCCCGAGCTGCGCGAGGAACTGGAGCGTCTGGCGTTGCCCTTCAATGAGGACACCATCCC
CTCCGACGCGGAGCTGCGCATCGCGCAGGCACAGCTGGTCGGCTGGCTGGAGGGTCTGTTCCACGGTATCCAGACCGCCC
TCTTCGCCCAGCAGATGGCGGCCCGCGCACAGCTGCAGCAGATGCGCAAAGGAGCTCTGCCCCCAGGGCTTTCGGTTCCC
GCACAGGGCGGCGGCAGCGGCACCGGCCAGTACCTGTAA

Upstream 100 bases:

>100_bases
CGTTGGACATATCCCGATCATGGAGAAAGCTGTACGACAACGGCGCCGCCCAGATCTACGAATGGGTTGGCGACCGGAAA
CCAGACGCGGAAGGTGACAA

Downstream 100 bases:

>100_bases
GTCCGAAACATGGTCAGTATCCAAACTCACCAGGCGTGGGTGGAATTCCCCATATTCGACGCCAAGTCACGCTCGCTCAA
GAAGGCGTTCCTGGGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRSRLREIHATSIR
ELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVP
AQGGGSGTGQYL

Sequences:

>Translated_172_residues
MTNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRSRLREIHATSIR
ELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVP
AQGGGSGTGQYL
>Mature_171_residues
TNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRAAPLDDASRSRLREIHATSIRE
LEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVPA
QGGGSGTGQYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0115 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019695 [H]

Pfam domain/function: PF10759 DUF2587 [H]

EC number: NA

Molecular weight: Translated: 18636; Mature: 18505

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRA
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APLDDASRSRLREIHATSIRELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLV
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
GWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVPAQGGGSGTGQYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNPGHDEDDDQVIILGADDSDKGADGLDDDLSVTDLVEQPAKVMRIGTMIKQLLEEVRA
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APLDDASRSRLREIHATSIRELEEGLAPELREELERLALPFNEDTIPSDAELRIAQAQLV
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
GWLEGLFHGIQTALFAQQMAARAQLQQMRKGALPPGLSVPAQGGGSGTGQYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]