| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627279
Identifier: 169627279
GI number: 169627279
Start: 169498
End: 171483
Strand: Direct
Name: 169627279
Synonym: MAB_0174
Alternate gene names: NA
Gene position: 169498-171483 (Clockwise)
Preceding gene: 169627278
Following gene: 169627280
Centisome position: 3.35
GC content: 65.11
Gene sequence:
>1986_bases GTGGGCCCCAGTAATGGGCTGACTCGCTTCACGGTGTGGGTCAGCGTCCTCACCGTGACCGTGCTGTTCGGGTGGGGCGC CTGGCAGCGGCGCTGGATCGCCGATGACGGGCTCATCGTGCTGCGCACCGTGCGAAATCTGCTGGCGGGCAACGGGCCCG TCTTCAACAAGGGAGAGCGCGTAGAGGCCAATACCTCCACGCTGTGGACATACCTGACCTATCTGGGCGGTTGGGCCGGG GGCGGCATGCGCCTGGAATACGTGGCGCTGACCTTGTCACTGGTCCTGAGCCTGGTGGGTGTGGCCTTGGCCATCCTGGG CACCGCCCGGCTGTACGCTCCTCTTCTTGCCGGGCGTGCGGCCGTGATGGTTCCAGCGGGGATGCTGGTGTACATCGCGA TCCCGCCGGCGCGTGACTTCGCCACCTCCGGCCTCGAAAACGGTTTGGTGCTGGCGTATTTGGGTGGGCTGTGGCTCATG ATGGTGAAGTGGGCGCAGGCCGTGCGCACGCCGGTGACCCTTGATCGGCGCGGTGGCCCACACCAGCCGGTGGATCCGCG GATCGTTCACGCCCAGAGAGATCAGCGGGACGTTCTCAGCAGGCGATTCACGGTGGGGCTGGCCTTCCTCGCCGGCCTGA GCGTGCTGATTCGCCCGGAGCTGGCGCTCATCGGCGGCGGCTTCCTGGTGATGATGCTGGTTGCCGCCCGCGGATTCATG AGCCGGATATGGATCGTGGTCGCCGGTGGCGCACTGCCCGTGCTCTACCAGATTTTCCGGATGGGCTACTACGGCCTCTT GGTGCCCAGCACAGCGATCGCCAAGGATGCCTCGGGTTCCAAGTGGGGGCAGGGGTTCGTCTACCTGCAGAACATGAACT CCCCGTACCTGATCTGGATTCCGGCGGTATTGCTCATCGCGCTGGGTGTGGCCGCCTACCAGGCCCGCCGCGGGCAGTGG TGGGTGCGGCAGGTGGCGGCTCCCGGTTACGGCTGGTTGGCTCGCCTCGTGCAAAACCCTACGGCCGTCGTCGTTTTCAT GCTCGTGAGCGGATTTGTTCAGGGTGTGTACTGGATCCGCCAGGGTGGGGACTTCATGCACGCCCGGGTGTTGTTGACCC CCGTGTTCTGCATGTTGCTTCCGATCTCGGTGGTTCCGCTGGCAGCTCCCGATAGCGCGGCCTTCACCCCCAAGAAGGCG CGTCTGCTCACAGCGGCCACCATCGGGTTGTTCGCCGGTATCGCGGGCTGGTCCGTCTGGGTGGCCAACTCGCCGGGCAT GGCAGGTGACGGCACCAAGGTCACCTATAGCGGCATCGTCGATGAGCGCCGTTTCTACGCGCAGGCCACAGGTGTCGCCC ACCCGCTGACCGCAGCGGACTATCTCAACTACCCCCGCATGCGGGCGGTGCTGGTGGCGATCGACAACACCCCCGACGGC GCGCTGTTACTTCCATCGGGGAACTACGACCAATGGGATGTGGCACCGGCGATCCCGCCACCGCCGCCGATCCCGCACGG GTACCGCGGACCACATGCGGTGCTGTTCACCAACCTGGGCATGCTCGGCATGAACCTGGGCCTGGACGTACGGATCGTGG ATCAGATCGGTTTGGCTAACCCGCTGGCCGCGCATACCGCGCGTATCACCGATGGGCGCATCGGCCACGACAAAAACCTG TTCCCGGACTGGATGATCGCCGACGGGCCGTGGCTCAAGCGTTATCCCTATATCCCCAGGTACATCGATCAAGACTGGGT GGCCGAGGCCGTCGAGGCGCTGAAATGTCCGCAGACCGACGCCATGCTCAGTGCGGTGCGCAAACCGTTGTCGCCGCGGT TGTTCGTGTCCAACATGCTGCACTCCTATGAGTTCACGACCTATCGGATCGATCGTGTGCCGCGCTTTGAACTGGCGCGA TGCGGTCTGCCGATGCCGAAGCTGGACACTCCTTCGTACACCGGGCTGCCGGCAACCGGTCCGTAG
Upstream 100 bases:
>100_bases GAGGAGATCGCTCTGGGGGACAGGGTGCTTCAGTTCCTGTTCGTCGCATGGATCGGATCGCTCGGTGCGGCCTTCTACTT CTCCTGAGCGGCCACGGGCC
Downstream 100 bases:
>100_bases GGTGTTCGTGCCCGGCCCCTCGAGGCGGCCGCCGTCGTGTCTGATTTGTGATCCCAATTAGGTAACGACGCGGCCCCGTC ATGGCGATACGAAGACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Arabinosyltransferase AftB; Integral Membrane Protein
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MGPSNGLTRFTVWVSVLTVTVLFGWGAWQRRWIADDGLIVLRTVRNLLAGNGPVFNKGERVEANTSTLWTYLTYLGGWAG GGMRLEYVALTLSLVLSLVGVALAILGTARLYAPLLAGRAAVMVPAGMLVYIAIPPARDFATSGLENGLVLAYLGGLWLM MVKWAQAVRTPVTLDRRGGPHQPVDPRIVHAQRDQRDVLSRRFTVGLAFLAGLSVLIRPELALIGGGFLVMMLVAARGFM SRIWIVVAGGALPVLYQIFRMGYYGLLVPSTAIAKDASGSKWGQGFVYLQNMNSPYLIWIPAVLLIALGVAAYQARRGQW WVRQVAAPGYGWLARLVQNPTAVVVFMLVSGFVQGVYWIRQGGDFMHARVLLTPVFCMLLPISVVPLAAPDSAAFTPKKA RLLTAATIGLFAGIAGWSVWVANSPGMAGDGTKVTYSGIVDERRFYAQATGVAHPLTAADYLNYPRMRAVLVAIDNTPDG ALLLPSGNYDQWDVAPAIPPPPPIPHGYRGPHAVLFTNLGMLGMNLGLDVRIVDQIGLANPLAAHTARITDGRIGHDKNL FPDWMIADGPWLKRYPYIPRYIDQDWVAEAVEALKCPQTDAMLSAVRKPLSPRLFVSNMLHSYEFTTYRIDRVPRFELAR CGLPMPKLDTPSYTGLPATGP
Sequences:
>Translated_661_residues MGPSNGLTRFTVWVSVLTVTVLFGWGAWQRRWIADDGLIVLRTVRNLLAGNGPVFNKGERVEANTSTLWTYLTYLGGWAG GGMRLEYVALTLSLVLSLVGVALAILGTARLYAPLLAGRAAVMVPAGMLVYIAIPPARDFATSGLENGLVLAYLGGLWLM MVKWAQAVRTPVTLDRRGGPHQPVDPRIVHAQRDQRDVLSRRFTVGLAFLAGLSVLIRPELALIGGGFLVMMLVAARGFM SRIWIVVAGGALPVLYQIFRMGYYGLLVPSTAIAKDASGSKWGQGFVYLQNMNSPYLIWIPAVLLIALGVAAYQARRGQW WVRQVAAPGYGWLARLVQNPTAVVVFMLVSGFVQGVYWIRQGGDFMHARVLLTPVFCMLLPISVVPLAAPDSAAFTPKKA RLLTAATIGLFAGIAGWSVWVANSPGMAGDGTKVTYSGIVDERRFYAQATGVAHPLTAADYLNYPRMRAVLVAIDNTPDG ALLLPSGNYDQWDVAPAIPPPPPIPHGYRGPHAVLFTNLGMLGMNLGLDVRIVDQIGLANPLAAHTARITDGRIGHDKNL FPDWMIADGPWLKRYPYIPRYIDQDWVAEAVEALKCPQTDAMLSAVRKPLSPRLFVSNMLHSYEFTTYRIDRVPRFELAR CGLPMPKLDTPSYTGLPATGP >Mature_660_residues GPSNGLTRFTVWVSVLTVTVLFGWGAWQRRWIADDGLIVLRTVRNLLAGNGPVFNKGERVEANTSTLWTYLTYLGGWAGG GMRLEYVALTLSLVLSLVGVALAILGTARLYAPLLAGRAAVMVPAGMLVYIAIPPARDFATSGLENGLVLAYLGGLWLMM VKWAQAVRTPVTLDRRGGPHQPVDPRIVHAQRDQRDVLSRRFTVGLAFLAGLSVLIRPELALIGGGFLVMMLVAARGFMS RIWIVVAGGALPVLYQIFRMGYYGLLVPSTAIAKDASGSKWGQGFVYLQNMNSPYLIWIPAVLLIALGVAAYQARRGQWW VRQVAAPGYGWLARLVQNPTAVVVFMLVSGFVQGVYWIRQGGDFMHARVLLTPVFCMLLPISVVPLAAPDSAAFTPKKAR LLTAATIGLFAGIAGWSVWVANSPGMAGDGTKVTYSGIVDERRFYAQATGVAHPLTAADYLNYPRMRAVLVAIDNTPDGA LLLPSGNYDQWDVAPAIPPPPPIPHGYRGPHAVLFTNLGMLGMNLGLDVRIVDQIGLANPLAAHTARITDGRIGHDKNLF PDWMIADGPWLKRYPYIPRYIDQDWVAEAVEALKCPQTDAMLSAVRKPLSPRLFVSNMLHSYEFTTYRIDRVPRFELARC GLPMPKLDTPSYTGLPATGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72011; Mature: 71880
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPSNGLTRFTVWVSVLTVTVLFGWGAWQRRWIADDGLIVLRTVRNLLAGNGPVFNKGER CCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCEECCCCCHHHHHHHHHHCCCCCCCCCCCE VEANTSTLWTYLTYLGGWAGGGMRLEYVALTLSLVLSLVGVALAILGTARLYAPLLAGRA EECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AVMVPAGMLVYIAIPPARDFATSGLENGLVLAYLGGLWLMMVKWAQAVRTPVTLDRRGGP EEEECCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC HQPVDPRIVHAQRDQRDVLSRRFTVGLAFLAGLSVLIRPELALIGGGFLVMMLVAARGFM CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHEECCHHHHHHHHHHHHHH SRIWIVVAGGALPVLYQIFRMGYYGLLVPSTAIAKDASGSKWGQGFVYLQNMNSPYLIWI HEEEEEEECCHHHHHHHHHHCCCHHEECCCHHHHCCCCCCCCCCCEEEEECCCCCEEEHH PAVLLIALGVAAYQARRGQWWVRQVAAPGYGWLARLVQNPTAVVVFMLVSGFVQGVYWIR HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QGGDFMHARVLLTPVFCMLLPISVVPLAAPDSAAFTPKKARLLTAATIGLFAGIAGWSVW CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE VANSPGMAGDGTKVTYSGIVDERRFYAQATGVAHPLTAADYLNYPRMRAVLVAIDNTPDG EECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEEEECCCCC ALLLPSGNYDQWDVAPAIPPPPPIPHGYRGPHAVLFTNLGMLGMNLGLDVRIVDQIGLAN EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCEEEHHHCCCCC PLAAHTARITDGRIGHDKNLFPDWMIADGPWLKRYPYIPRYIDQDWVAEAVEALKCPQTD CHHHHHEECCCCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCHH AMLSAVRKPLSPRLFVSNMLHSYEFTTYRIDRVPRFELARCGLPMPKLDTPSYTGLPATG HHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCC P C >Mature Secondary Structure GPSNGLTRFTVWVSVLTVTVLFGWGAWQRRWIADDGLIVLRTVRNLLAGNGPVFNKGER CCCCCCHHHHHHHHHHHHHHHHCCCCHHCCEECCCCCHHHHHHHHHHCCCCCCCCCCCE VEANTSTLWTYLTYLGGWAGGGMRLEYVALTLSLVLSLVGVALAILGTARLYAPLLAGRA EECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AVMVPAGMLVYIAIPPARDFATSGLENGLVLAYLGGLWLMMVKWAQAVRTPVTLDRRGGP EEEECCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC HQPVDPRIVHAQRDQRDVLSRRFTVGLAFLAGLSVLIRPELALIGGGFLVMMLVAARGFM CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHEECCHHHHHHHHHHHHHH SRIWIVVAGGALPVLYQIFRMGYYGLLVPSTAIAKDASGSKWGQGFVYLQNMNSPYLIWI HEEEEEEECCHHHHHHHHHHCCCHHEECCCHHHHCCCCCCCCCCCEEEEECCCCCEEEHH PAVLLIALGVAAYQARRGQWWVRQVAAPGYGWLARLVQNPTAVVVFMLVSGFVQGVYWIR HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QGGDFMHARVLLTPVFCMLLPISVVPLAAPDSAAFTPKKARLLTAATIGLFAGIAGWSVW CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE VANSPGMAGDGTKVTYSGIVDERRFYAQATGVAHPLTAADYLNYPRMRAVLVAIDNTPDG EECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEEEECCCCC ALLLPSGNYDQWDVAPAIPPPPPIPHGYRGPHAVLFTNLGMLGMNLGLDVRIVDQIGLAN EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCEEEHHHCCCCC PLAAHTARITDGRIGHDKNLFPDWMIADGPWLKRYPYIPRYIDQDWVAEAVEALKCPQTD CHHHHHEECCCCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCHH AMLSAVRKPLSPRLFVSNMLHSYEFTTYRIDRVPRFELARCGLPMPKLDTPSYTGLPATG HHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA