| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627213
Identifier: 169627213
GI number: 169627213
Start: 109422
End: 110027
Strand: Reverse
Name: 169627213
Synonym: MAB_0108c
Alternate gene names: NA
Gene position: 110027-109422 (Counterclockwise)
Preceding gene: 169627214
Following gene: 169627212
Centisome position: 2.17
GC content: 75.91
Gene sequence:
>606_bases ATGGCGGACCAGGACAATTCGGCCAACGAGCCCAACCAAACACCGGAGAAGGCTGCGGGCGGCGAATCGCCCAAGCCCTC GGCGCCGGCCCGGCCGGCGAAGGCCGCCAAGCGTCCGGCCGCCAAACGCGCACCCGCCAAGCGGCCCGCCGGCTCATCGG CACCGCCCAAGTCGGGCCCCAAGGCCGCGCCCGCGCCCAGCGCTGACGCGGCTCCGAAACCGCCCGCCGCGGCGAAGCCC GCCGAGGCACCCAAGCCCGCCGCCCCGGCGCCTGCCCCCGCAGCGGAACCGGCACCGGCGCCCAAGCCTGCGGCCCAGCC GGTGTCCGAGGCTCCGGCGGCGCCCAAGCCTGTCGCACCGGCATCAAAGCCGGAAGCCGCCAAGCCAGAGCCCGCACAGC CGGATCTCGCGGCCGCCGCCCGGGAGACCGCCGCGCAGGCCAAATCCACCGTCGACTCGGCTCCGCCACCGATCCCGGGC CCCGCCCCCGAACAGGGGCGGCAATCCCCGAACCTGAAGATCGCCGTCGGTGCCGTTGCCGCGATCCTTGCCCTGCTGCT ACTGCGCCGCCGGCGCCGCCGGGAGGACTCCGTCGAATCGGAGTGA
Upstream 100 bases:
>100_bases CAACGGCGGGGCGGCAGAGACTCGGGTGTAAGCCGCCCATCGTGGCCGAGAGTGCGCCACGAACACCCAGGACGACCGAA ACTTGCGAAGGAGCAGGCGC
Downstream 100 bases:
>100_bases TCGGTCCCGCCGGACTACCGGACCGGTGGCCTCTGAGAGCTGCCCCACCGGGCAATAAACTCGGGGTATGACGACCGCAC CGATCACCCCCCGACCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MADQDNSANEPNQTPEKAAGGESPKPSAPARPAKAAKRPAAKRAPAKRPAGSSAPPKSGPKAAPAPSADAAPKPPAAAKP AEAPKPAAPAPAPAAEPAPAPKPAAQPVSEAPAAPKPVAPASKPEAAKPEPAQPDLAAAARETAAQAKSTVDSAPPPIPG PAPEQGRQSPNLKIAVGAVAAILALLLLRRRRRREDSVESE
Sequences:
>Translated_201_residues MADQDNSANEPNQTPEKAAGGESPKPSAPARPAKAAKRPAAKRAPAKRPAGSSAPPKSGPKAAPAPSADAAPKPPAAAKP AEAPKPAAPAPAPAAEPAPAPKPAAQPVSEAPAAPKPVAPASKPEAAKPEPAQPDLAAAARETAAQAKSTVDSAPPPIPG PAPEQGRQSPNLKIAVGAVAAILALLLLRRRRRREDSVESE >Mature_200_residues ADQDNSANEPNQTPEKAAGGESPKPSAPARPAKAAKRPAAKRAPAKRPAGSSAPPKSGPKAAPAPSADAAPKPPAAAKPA EAPKPAAPAPAPAAEPAPAPKPAAQPVSEAPAAPKPVAPASKPEAAKPEPAQPDLAAAARETAAQAKSTVDSAPPPIPGP APEQGRQSPNLKIAVGAVAAILALLLLRRRRRREDSVESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19871; Mature: 19740
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQDNSANEPNQTPEKAAGGESPKPSAPARPAKAAKRPAAKRAPAKRPAGSSAPPKSGP CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCC KAAPAPSADAAPKPPAAAKPAEAPKPAAPAPAPAAEPAPAPKPAAQPVSEAPAAPKPVAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC ASKPEAAKPEPAQPDLAAAARETAAQAKSTVDSAPPPIPGPAPEQGRQSPNLKIAVGAVA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEHHHHHH AILALLLLRRRRRREDSVESE HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ADQDNSANEPNQTPEKAAGGESPKPSAPARPAKAAKRPAAKRAPAKRPAGSSAPPKSGP CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCC KAAPAPSADAAPKPPAAAKPAEAPKPAAPAPAPAAEPAPAPKPAAQPVSEAPAAPKPVAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC ASKPEAAKPEPAQPDLAAAARETAAQAKSTVDSAPPPIPGPAPEQGRQSPNLKIAVGAVA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEHHHHHH AILALLLLRRRRRREDSVESE HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA