| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is ucpA [C]
Identifier: 169627205
GI number: 169627205
Start: 101092
End: 101922
Strand: Direct
Name: ucpA [C]
Synonym: MAB_0100
Alternate gene names: 169627205
Gene position: 101092-101922 (Clockwise)
Preceding gene: 169627204
Following gene: 169627206
Centisome position: 2.0
GC content: 62.09
Gene sequence:
>831_bases ATGACCAGTCAGCATGACAAGCCCCTTGCCGGGCGCGTCGCGTACATCACCGGGGCCGGGCGCGGCCAGGGCCGGGCGCA CGCCATCCGGTTGGCGGCCGACGGCGCCGACATCGTGGCGATCGACACCTGTGACAAGCCCTCCCCGTACAACGACTACC CGGCGACTACGTCACATGAGTTCGATGAGACCATTTCCGCGGTAAGGGATCTGGGCCGCGACATCATCACCGAACGCGTC GATGTACGCGATCTTGCGGGGCATCAGAAGGTGATCCAGGAAGCGATCACCCGGTTCGGACGCCTGGACATCGTGGTGGC CAACGCGGGTATCGCCAGCTGGGCGCGGCTCTGGGAGATCGAGGCCGACCAATGGCGCGATGTCATCGACGTCAATCTGA CCGGAGTGTGGAACACCATCAAAGCCGCGGTCCCGGCGATGATCGAGGCAGGCAACGGTGGCTCCATCATCACGGTGAGT TCCTCGGCGGGTATCAAGGCCATGCCGGGGTGCGGGCACTATGTAGCGGCCAAGTTCGGTGTGGTGGGTTTGACCAACTC ACTGGCGATCGAATTGGGCGAGTATGGGATTCGAGTCAATTCGATTCATCCTTATGGGACCAACACACCCTTGGCGGGCG ATCAGTCGGTATTGAGGATGTTCGAGATGTATCCCGGATATCTGCAGAGCTTTAGCCAGACACTGGTCGACAACGACAGG CTGATCGAGCCCGCCGAGATTGCCGAGGTGGTGGCGTGGCTGGCCGGCGATGCGTCCGGGGTCATGACCGGCGCACAGAT TCCCGTCGACAAGGGATACCTCAAGCGATGA
Upstream 100 bases:
>100_bases TACCGCCCGCAGACGGTCAGTGAGATGAATTGGTTCTCCAAGCATTCCCCCATCTCCGACTACTCGTTGCGGCCGGTTTC GATGGAGACGAAGGTGCGCT
Downstream 100 bases:
>100_bases CCACCTGCCCATTCACACCCGGTTTCGATTTCACGGATCCGGATCTCATTCAGCACCGCATCCCGGCCGAGGAATTTGCG TATCTGCGAAAGACCGAGCC
Product: putative short chain dehydrogenase/reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTSQHDKPLAGRVAYITGAGRGQGRAHAIRLAADGADIVAIDTCDKPSPYNDYPATTSHEFDETISAVRDLGRDIITERV DVRDLAGHQKVIQEAITRFGRLDIVVANAGIASWARLWEIEADQWRDVIDVNLTGVWNTIKAAVPAMIEAGNGGSIITVS SSAGIKAMPGCGHYVAAKFGVVGLTNSLAIELGEYGIRVNSIHPYGTNTPLAGDQSVLRMFEMYPGYLQSFSQTLVDNDR LIEPAEIAEVVAWLAGDASGVMTGAQIPVDKGYLKR
Sequences:
>Translated_276_residues MTSQHDKPLAGRVAYITGAGRGQGRAHAIRLAADGADIVAIDTCDKPSPYNDYPATTSHEFDETISAVRDLGRDIITERV DVRDLAGHQKVIQEAITRFGRLDIVVANAGIASWARLWEIEADQWRDVIDVNLTGVWNTIKAAVPAMIEAGNGGSIITVS SSAGIKAMPGCGHYVAAKFGVVGLTNSLAIELGEYGIRVNSIHPYGTNTPLAGDQSVLRMFEMYPGYLQSFSQTLVDNDR LIEPAEIAEVVAWLAGDASGVMTGAQIPVDKGYLKR >Mature_275_residues TSQHDKPLAGRVAYITGAGRGQGRAHAIRLAADGADIVAIDTCDKPSPYNDYPATTSHEFDETISAVRDLGRDIITERVD VRDLAGHQKVIQEAITRFGRLDIVVANAGIASWARLWEIEADQWRDVIDVNLTGVWNTIKAAVPAMIEAGNGGSIITVSS SAGIKAMPGCGHYVAAKFGVVGLTNSLAIELGEYGIRVNSIHPYGTNTPLAGDQSVLRMFEMYPGYLQSFSQTLVDNDRL IEPAEIAEVVAWLAGDASGVMTGAQIPVDKGYLKR
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=285, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI32483357, Length=270, Percent_Identity=29.2592592592593, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4504505, Length=252, Percent_Identity=30.952380952381, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI126723191, Length=197, Percent_Identity=29.9492385786802, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=30.3501945525292, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=29.8507462686567, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI126723750, Length=273, Percent_Identity=27.1062271062271, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI59889578, Length=200, Percent_Identity=31.5, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI19923817, Length=277, Percent_Identity=27.4368231046931, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7705925, Length=272, Percent_Identity=27.5735294117647, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI142976729, Length=216, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI40807363, Length=207, Percent_Identity=28.0193236714976, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI25282469, Length=274, Percent_Identity=28.1021897810219, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI31542939, Length=206, Percent_Identity=31.0679611650485, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI210032110, Length=219, Percent_Identity=28.7671232876712, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40254992, Length=261, Percent_Identity=28.735632183908, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI10190704, Length=268, Percent_Identity=26.4925373134328, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI223718074, Length=252, Percent_Identity=26.984126984127, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI83715985, Length=257, Percent_Identity=28.7937743190661, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI66933014, Length=267, Percent_Identity=26.5917602996255, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI302344755, Length=110, Percent_Identity=37.2727272727273, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI40254986, Length=199, Percent_Identity=31.1557788944724, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI4503817, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI5031737, Length=273, Percent_Identity=26.007326007326, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI224922801, Length=182, Percent_Identity=30.2197802197802, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87082100, Length=265, Percent_Identity=32.8301886792453, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1789208, Length=273, Percent_Identity=30.4029304029304, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1787335, Length=267, Percent_Identity=32.2097378277154, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1788459, Length=271, Percent_Identity=28.0442804428044, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87082160, Length=275, Percent_Identity=29.4545454545455, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786812, Length=270, Percent_Identity=26.2962962962963, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1789057, Length=197, Percent_Identity=31.9796954314721, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787526, Length=265, Percent_Identity=27.1698113207547, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367365, Length=267, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787905, Length=204, Percent_Identity=28.4313725490196, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI2367175, Length=271, Percent_Identity=25.4612546125461, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1788891, Length=158, Percent_Identity=32.9113924050633, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790717, Length=283, Percent_Identity=26.5017667844523, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560676, Length=277, Percent_Identity=30.6859205776173, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25147288, Length=268, Percent_Identity=32.4626865671642, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17555706, Length=267, Percent_Identity=31.4606741573034, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17567345, Length=237, Percent_Identity=30.379746835443, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17568967, Length=200, Percent_Identity=33, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562908, Length=277, Percent_Identity=28.158844765343, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562906, Length=277, Percent_Identity=28.5198555956679, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17559104, Length=273, Percent_Identity=31.1355311355311, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562910, Length=275, Percent_Identity=28.7272727272727, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=27.7566539923954, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17564282, Length=206, Percent_Identity=28.6407766990291, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17561402, Length=278, Percent_Identity=28.4172661870504, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71994604, Length=264, Percent_Identity=26.8939393939394, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17508895, Length=208, Percent_Identity=28.3653846153846, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203117, Length=184, Percent_Identity=28.804347826087, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538182, Length=253, Percent_Identity=30.0395256916996, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI193203115, Length=186, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=26.9961977186312, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562904, Length=279, Percent_Identity=26.8817204301075, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17544670, Length=283, Percent_Identity=24.3816254416961, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=24.4186046511628, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71994600, Length=201, Percent_Identity=26.3681592039801, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71982365, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536025, Length=269, Percent_Identity=25.6505576208178, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17560150, Length=276, Percent_Identity=25.3623188405797, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115534694, Length=263, Percent_Identity=25.4752851711027, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=26.8115942028986, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17551412, Length=284, Percent_Identity=26.4084507042254, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=24.21875, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17538480, Length=279, Percent_Identity=27.2401433691756, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17558628, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17536651, Length=269, Percent_Identity=23.4200743494424, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=202, Percent_Identity=35.6435643564356, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324126, Length=275, Percent_Identity=26.5454545454545, Blast_Score=82, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=31.8181818181818, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24639444, Length=269, Percent_Identity=34.9442379182156, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644339, Length=264, Percent_Identity=29.9242424242424, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859837, Length=249, Percent_Identity=34.5381526104418, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI23397609, Length=264, Percent_Identity=28.7878787878788, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355319, Length=271, Percent_Identity=28.7822878228782, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=28.6852589641434, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24643142, Length=265, Percent_Identity=30.188679245283, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI28571526, Length=276, Percent_Identity=26.8115942028986, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=30.1507537688442, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357673, Length=198, Percent_Identity=29.2929292929293, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281364892, Length=218, Percent_Identity=30.7339449541284, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI21355631, Length=264, Percent_Identity=24.2424242424242, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24644337, Length=178, Percent_Identity=32.5842696629214, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640492, Length=228, Percent_Identity=28.0701754385965, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581726, Length=207, Percent_Identity=30.4347826086957, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24580925, Length=203, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356301, Length=218, Percent_Identity=25.2293577981651, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24649181, Length=227, Percent_Identity=28.1938325991189, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 29581; Mature: 29450
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQHDKPLAGRVAYITGAGRGQGRAHAIRLAADGADIVAIDTCDKPSPYNDYPATTSHE CCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCH FDETISAVRDLGRDIITERVDVRDLAGHQKVIQEAITRFGRLDIVVANAGIASWARLWEI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCC EADQWRDVIDVNLTGVWNTIKAAVPAMIEAGNGGSIITVSSSAGIKAMPGCGHYVAAKFG CHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCCCEEEEECCCCCEECCCCCHHHHHHHH VVGLTNSLAIELGEYGIRVNSIHPYGTNTPLAGDQSVLRMFEMYPGYLQSFSQTLVDNDR HEECCCHHEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCC LIEPAEIAEVVAWLAGDASGVMTGAQIPVDKGYLKR CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure TSQHDKPLAGRVAYITGAGRGQGRAHAIRLAADGADIVAIDTCDKPSPYNDYPATTSHE CCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCH FDETISAVRDLGRDIITERVDVRDLAGHQKVIQEAITRFGRLDIVVANAGIASWARLWEI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCC EADQWRDVIDVNLTGVWNTIKAAVPAMIEAGNGGSIITVSSSAGIKAMPGCGHYVAAKFG CHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCCCEEEEECCCCCEECCCCCHHHHHHHH VVGLTNSLAIELGEYGIRVNSIHPYGTNTPLAGDQSVLRMFEMYPGYLQSFSQTLVDNDR HEECCCHHEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCC LIEPAEIAEVVAWLAGDASGVMTGAQIPVDKGYLKR CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA