| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627204
Identifier: 169627204
GI number: 169627204
Start: 99546
End: 101108
Strand: Direct
Name: 169627204
Synonym: MAB_0099
Alternate gene names: NA
Gene position: 99546-101108 (Clockwise)
Preceding gene: 169627203
Following gene: 169627205
Centisome position: 1.96
GC content: 62.38
Gene sequence:
>1563_bases ATGAGCGATATCGACTTTCGGGTAGCAATCATCGGTGCGGGCCCGGGGGGTATCGCCGCCGCCTACTATCTGCGACGGCA GGGCATCAACGATTTCGTCATCTTGGAGCGGGCCGATGATTTTGGTGGCACCTGGCGGGACAACACCTATCCGGGGCTTG CCGTCGATATCCCGGTTGTGTTCTACCAATTGAGTTTCGCGCGAACCGGTCGGTGGAACAAGCTGTTCGCCGACGGCGCC GATATTCAGCGCTATCACCTGTCGGTGGTGGCGCAGTTGGGCCTGCGCGAGCATTTCCAGGGTGGCAGCGAGGTGATCGC GGAACGTTGGGACGACGATGGCGACTATTGGGAACTGACCATCACGGGAAAGCCGGTCGTTCGTGCTCGTTACGTGATCA GTGCCGTCGGCGGATACATTGACACCAAACCGGGCCCCGATATCCCCGGTATCAACGACTTTCGCGGCAAGGTCATGCGC CCGAACGAGTGGGACCATTCCTACGACTACACGGGTAAGCGGGTCGCGGTGATCGGCACCGGCTCCAGCGGTATCCAGAT CGCCCCCGCCGTCGCACGAACCGCCGCGTCGGTGACGACCTTCCAGCGCACCCCGGCATGGATCATCCCCAAACCCAACC CTGCGCTCTCGCCGCGCGCCCAGCGGATACTGAGTGCGCCGTTGATGCTGACGCTCATCAACGCGTCGATCGCCGTGTCC ATGGACATCGTCGAGTTCGTGCTATTCCATCTGCTGCCCCTGCTCCCGGAATCGGTCCTGCGCGTGTTGATTCCCCGCTA CGACAACATGGCACGGCGGTGGTACCGCAGATTGTTGCGTAGCACCGTCCAAGATCCGGAGCTGCGCAAGGCGCTGATGC CCAGTTACGGCATCCTCGCGCGGCGCACCATCTTGTCGAGCGACTTTCTCCAGGCAGTGGATGCCGGCGAGGTTCAACTG GTCATTGAACCGATTGCGCGTGTCACCGAGGACGGCATAGATACCGCAGATGGTGCGCATCACGCCGTTGACTTGTTGGT GCTGGCGACCGGCTATGAGATCTACACGGATCCAGAACACTACAAACCGGGAGCGGTGCGAGGCCGCAACGGCTTCGACC TGGGTACGTACTACTGCGACAACGACATGCGAACCTATGGCGGATCGGCACTGCCCGGCCTGCCGAACCGGTGGATGCTG GTGGGCCCGGAGGGTAACCAGGGGCAGGGCTGGCACGCGATGGTAGAGGCCAACGCACGGCACGCCGCCCGGATCATCGG CGCGTCGAGCAGGTGCCACCGCGAGGTCGCGGAGGTCAGCCGGCGGGCATTTGACCGGTGGGTGCGCAAAATGGCGCACC AGAGCAAGGCGATCCGGCTGTATGCCACCGACTGCCAACCGCCGTTGAGCACCTACTTCGTCAACTCCAAGGGGGAGACG CGGTATTACCGCCCGCAGACGGTCAGTGAGATGAATTGGTTCTCCAAGCATTCCCCCATCTCCGACTACTCGTTGCGGCC GGTTTCGATGGAGACGAAGGTGCGCTATGACCAGTCAGCATGA
Upstream 100 bases:
>100_bases CCCTGATGAGCATCGAGGTCCTGCCCGCCATCTCCGTGGACCTGACGGACCCGAACCGGGTGCGCAGGTACTTTTCCCGG TTCATCTTGCGTGGACTGGC
Downstream 100 bases:
>100_bases CAAGCCCCTTGCCGGGCGCGTCGCGTACATCACCGGGGCCGGGCGCGGCCAGGGCCGGGCGCACGCCATCCGGTTGGCGG CCGACGGCGCCGACATCGTG
Product: monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSDIDFRVAIIGAGPGGIAAAYYLRRQGINDFVILERADDFGGTWRDNTYPGLAVDIPVVFYQLSFARTGRWNKLFADGA DIQRYHLSVVAQLGLREHFQGGSEVIAERWDDDGDYWELTITGKPVVRARYVISAVGGYIDTKPGPDIPGINDFRGKVMR PNEWDHSYDYTGKRVAVIGTGSSGIQIAPAVARTAASVTTFQRTPAWIIPKPNPALSPRAQRILSAPLMLTLINASIAVS MDIVEFVLFHLLPLLPESVLRVLIPRYDNMARRWYRRLLRSTVQDPELRKALMPSYGILARRTILSSDFLQAVDAGEVQL VIEPIARVTEDGIDTADGAHHAVDLLVLATGYEIYTDPEHYKPGAVRGRNGFDLGTYYCDNDMRTYGGSALPGLPNRWML VGPEGNQGQGWHAMVEANARHAARIIGASSRCHREVAEVSRRAFDRWVRKMAHQSKAIRLYATDCQPPLSTYFVNSKGET RYYRPQTVSEMNWFSKHSPISDYSLRPVSMETKVRYDQSA
Sequences:
>Translated_520_residues MSDIDFRVAIIGAGPGGIAAAYYLRRQGINDFVILERADDFGGTWRDNTYPGLAVDIPVVFYQLSFARTGRWNKLFADGA DIQRYHLSVVAQLGLREHFQGGSEVIAERWDDDGDYWELTITGKPVVRARYVISAVGGYIDTKPGPDIPGINDFRGKVMR PNEWDHSYDYTGKRVAVIGTGSSGIQIAPAVARTAASVTTFQRTPAWIIPKPNPALSPRAQRILSAPLMLTLINASIAVS MDIVEFVLFHLLPLLPESVLRVLIPRYDNMARRWYRRLLRSTVQDPELRKALMPSYGILARRTILSSDFLQAVDAGEVQL VIEPIARVTEDGIDTADGAHHAVDLLVLATGYEIYTDPEHYKPGAVRGRNGFDLGTYYCDNDMRTYGGSALPGLPNRWML VGPEGNQGQGWHAMVEANARHAARIIGASSRCHREVAEVSRRAFDRWVRKMAHQSKAIRLYATDCQPPLSTYFVNSKGET RYYRPQTVSEMNWFSKHSPISDYSLRPVSMETKVRYDQSA >Mature_519_residues SDIDFRVAIIGAGPGGIAAAYYLRRQGINDFVILERADDFGGTWRDNTYPGLAVDIPVVFYQLSFARTGRWNKLFADGAD IQRYHLSVVAQLGLREHFQGGSEVIAERWDDDGDYWELTITGKPVVRARYVISAVGGYIDTKPGPDIPGINDFRGKVMRP NEWDHSYDYTGKRVAVIGTGSSGIQIAPAVARTAASVTTFQRTPAWIIPKPNPALSPRAQRILSAPLMLTLINASIAVSM DIVEFVLFHLLPLLPESVLRVLIPRYDNMARRWYRRLLRSTVQDPELRKALMPSYGILARRTILSSDFLQAVDAGEVQLV IEPIARVTEDGIDTADGAHHAVDLLVLATGYEIYTDPEHYKPGAVRGRNGFDLGTYYCDNDMRTYGGSALPGLPNRWMLV GPEGNQGQGWHAMVEANARHAARIIGASSRCHREVAEVSRRAFDRWVRKMAHQSKAIRLYATDCQPPLSTYFVNSKGETR YYRPQTVSEMNWFSKHSPISDYSLRPVSMETKVRYDQSA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI50541965, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI50541961, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25145785, Length=254, Percent_Identity=23.6220472440945, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541300, Length=225, Percent_Identity=25.3333333333333, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 58170; Mature: 58039
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIDFRVAIIGAGPGGIAAAYYLRRQGINDFVILERADDFGGTWRDNTYPGLAVDIPVV CCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEHHEE FYQLSFARTGRWNKLFADGADIQRYHLSVVAQLGLREHFQGGSEVIAERWDDDGDYWELT EHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEE ITGKPVVRARYVISAVGGYIDTKPGPDIPGINDFRGKVMRPNEWDHSYDYTGKRVAVIGT ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEC GSSGIQIAPAVARTAASVTTFQRTPAWIIPKPNPALSPRAQRILSAPLMLTLINASIAVS CCCCCEECHHHHHHHHHHHEECCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHCCHHEEH MDIVEFVLFHLLPLLPESVLRVLIPRYDNMARRWYRRLLRSTVQDPELRKALMPSYGILA HHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH RRTILSSDFLQAVDAGEVQLVIEPIARVTEDGIDTADGAHHAVDLLVLATGYEIYTDPEH HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHEEEEEEEECCEEECCCCC YKPGAVRGRNGFDLGTYYCDNDMRTYGGSALPGLPNRWMLVGPEGNQGQGWHAMVEANAR CCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCH HAARIIGASSRCHREVAEVSRRAFDRWVRKMAHQSKAIRLYATDCQPPLSTYFVNSKGET HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCC RYYRPQTVSEMNWFSKHSPISDYSLRPVSMETKVRYDQSA EEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCC >Mature Secondary Structure SDIDFRVAIIGAGPGGIAAAYYLRRQGINDFVILERADDFGGTWRDNTYPGLAVDIPVV CCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEHHEE FYQLSFARTGRWNKLFADGADIQRYHLSVVAQLGLREHFQGGSEVIAERWDDDGDYWELT EHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEE ITGKPVVRARYVISAVGGYIDTKPGPDIPGINDFRGKVMRPNEWDHSYDYTGKRVAVIGT ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEC GSSGIQIAPAVARTAASVTTFQRTPAWIIPKPNPALSPRAQRILSAPLMLTLINASIAVS CCCCCEECHHHHHHHHHHHEECCCCEEEECCCCCCCCHHHHHHHHCCHHHHHHCCHHEEH MDIVEFVLFHLLPLLPESVLRVLIPRYDNMARRWYRRLLRSTVQDPELRKALMPSYGILA HHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH RRTILSSDFLQAVDAGEVQLVIEPIARVTEDGIDTADGAHHAVDLLVLATGYEIYTDPEH HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHEEEEEEEECCEEECCCCC YKPGAVRGRNGFDLGTYYCDNDMRTYGGSALPGLPNRWMLVGPEGNQGQGWHAMVEANAR CCCCCCCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCH HAARIIGASSRCHREVAEVSRRAFDRWVRKMAHQSKAIRLYATDCQPPLSTYFVNSKGET HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCC RYYRPQTVSEMNWFSKHSPISDYSLRPVSMETKVRYDQSA EEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]