| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627172
Identifier: 169627172
GI number: 169627172
Start: 64286
End: 65194
Strand: Direct
Name: 169627172
Synonym: MAB_0067
Alternate gene names: NA
Gene position: 64286-65194 (Clockwise)
Preceding gene: 169627167
Following gene: 169627173
Centisome position: 1.27
GC content: 64.69
Gene sequence:
>909_bases ATGGCTATTTGGTTTGTGCGATACGGCTACGTGCCGCTGATGTTGTTGGGTATCAACGGGGTTGCGATTGCGCTGGCGCA CCGGCCCTGGGCACCGCTGTGGATGGTGGTGCTCATTTTGGTGGCGATCGGACTGTCGTTCCTCGCCGAGCGGGTGGCGC CCTACTCGCCCGAGTGGAACGAGTCGATGGGAGACGCGCGGCGGGATGCCGCGCATGCCTTCGTGAACGAGACCGCGCTG CTACTCACGGTGCTGGTCGTACCGGCGGTGGCGCTGCTCTCGCCGTTCCACACCTGGTGGCCGTCGTCGATCCCCTTTGT GTTGCAGGTGCTCATCGCTGCGGCCGTCGCCGATTTCGGAATCACGCTCATGCACTACGCCAGCCACAAGGTGCCGGCCC TGTGGCGACTGCATGCCGTGCACCACAGCATCAAAAGGTTCTACGGCTTCAACGGATTGATGAAACATCCCGTGCACGGT GGGCTGGAACTGATGGCAGGGACGGCGCCGCTTCTCATCATGGGGTTGCCGCAGGCGGTCGCCGAAGCATTGACGGTCTT GATCGCGGTCCAGCTGTTGCTGCAGCATTCCAACGCCGACTACCGGATCGGCCGGCTGCGGGTGGTGCTGGCGCTCAATG AGGGGCACCGGTTCCATCACCTCAAGTGGGCGGGCATCGGCGACGTCAACTTCGGGCTGTTCACGCTGGTCTGGGACCAT CTGCTGCGGACGTTCTCATTTGACCCGGCGCGGCGCTTTCACAGCGACGACCTGGGCATGGCGGCCAAGCCGAACTATCC GGCCGGATACACCGCGCAGCTCGCCGAGCCGTTCCGGACCAGCGGTGCGTGCCACTTCGACGGTCTGCAATCCGAGGTGA CGGCGACCGGGCGGCAGCCGTCGACGTGA
Upstream 100 bases:
>100_bases GATGACTGCCGCGCCTGTCCAGACCATGCCTTTGAGTATCTGCGACAGGTCAACGGATCTGTACATGCGCGGCATACACA CAAAAACCAAGACTGCTTGC
Downstream 100 bases:
>100_bases CGCTGAACACCCTGTGAGGTGCGACTTTCGGCTTGTGGGGGCCACCGGCGGTGAGCTTAGATACATGTTGTGTCTATGAT TCGTACGGTGGCCATCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Transmembrane Protein; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein; Sterol Desaturase -Like Protein; Fatty Acid Hydroxylase Superfamily; TRAP Dicarboxylate Transporter DctM Subunit; Sterol Desaturase Transmembrane Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGLSFLAERVAPYSPEWNESMGDARRDAAHAFVNETAL LLTVLVVPAVALLSPFHTWWPSSIPFVLQVLIAAAVADFGITLMHYASHKVPALWRLHAVHHSIKRFYGFNGLMKHPVHG GLELMAGTAPLLIMGLPQAVAEALTVLIAVQLLLQHSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDH LLRTFSFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDGLQSEVTATGRQPST
Sequences:
>Translated_302_residues MAIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGLSFLAERVAPYSPEWNESMGDARRDAAHAFVNETAL LLTVLVVPAVALLSPFHTWWPSSIPFVLQVLIAAAVADFGITLMHYASHKVPALWRLHAVHHSIKRFYGFNGLMKHPVHG GLELMAGTAPLLIMGLPQAVAEALTVLIAVQLLLQHSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDH LLRTFSFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDGLQSEVTATGRQPST >Mature_301_residues AIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGLSFLAERVAPYSPEWNESMGDARRDAAHAFVNETALL LTVLVVPAVALLSPFHTWWPSSIPFVLQVLIAAAVADFGITLMHYASHKVPALWRLHAVHHSIKRFYGFNGLMKHPVHGG LELMAGTAPLLIMGLPQAVAEALTVLIAVQLLLQHSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDHL LRTFSFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDGLQSEVTATGRQPST
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33342; Mature: 33211
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGLSFLAERVAPYSPEWN CEEEEEECCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ESMGDARRDAAHAFVNETALLLTVLVVPAVALLSPFHTWWPSSIPFVLQVLIAAAVADFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ITLMHYASHKVPALWRLHAVHHSIKRFYGFNGLMKHPVHGGLELMAGTAPLLIMGLPQAV HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHCCCCCCEEECCHHHH AEALTVLIAVQLLLQHSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDH HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH LLRTFSFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDGLQSEVTATGRQP HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHCCCCCC ST CC >Mature Secondary Structure AIWFVRYGYVPLMLLGINGVAIALAHRPWAPLWMVVLILVAIGLSFLAERVAPYSPEWN EEEEEECCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ESMGDARRDAAHAFVNETALLLTVLVVPAVALLSPFHTWWPSSIPFVLQVLIAAAVADFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ITLMHYASHKVPALWRLHAVHHSIKRFYGFNGLMKHPVHGGLELMAGTAPLLIMGLPQAV HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHCCCCCCEEECCHHHH AEALTVLIAVQLLLQHSNADYRIGRLRVVLALNEGHRFHHLKWAGIGDVNFGLFTLVWDH HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH LLRTFSFDPARRFHSDDLGMAAKPNYPAGYTAQLAEPFRTSGACHFDGLQSEVTATGRQP HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHCCCCCC ST CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA