| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is yfeW [C]
Identifier: 169627169
GI number: 169627169
Start: 61012
End: 62259
Strand: Reverse
Name: yfeW [C]
Synonym: MAB_0064c
Alternate gene names: 169627169
Gene position: 62259-61012 (Counterclockwise)
Preceding gene: 169627170
Following gene: 169627168
Centisome position: 1.23
GC content: 67.71
Gene sequence:
>1248_bases ATGACCGCCAGCGACCAAGCCGGACGCATCCGAGTTCCCGCCGATCTGGACTCGGTGACGGATATCGCCGAGGAAGACCA CTCAGACATAGGCCCGGCCGCCGTCGAGCGCATCTGGCAGGCGGCACGGTACTGGTACCAGGCCGGCATGCACCCCGCCA TCCAGGTGTGCTTGCGGCATAGGGGCAAGGTGATCCTCAACCGTGCCATCGGGCACGGTTGGGGCAACGCCCCCACCGAT CCCGTCGACGCCGAGAAGATTCCCGTCACCACCGACACGCCGTTCTGCGTGTACTCGGCCGCCAAGGCCATCTCGACGAC GGTGGTCCACCTGCTGGTGGAGCGCGGCGCGCTCTCGCTCGACGACCGGGTCTGCGAATATCTGCCCACCTTCACCAGCC GCGGTAAGGACCGCATCACCATCCGGCACGTGATGACGCACAGCGCCGGTATCCCGGTCCCCACCGGTCCGCGTCCGGAC ATCACCCGGATGGACGACAGCGAGTACACCCGCGAACAGCTCGGGCAGCTGCGCCCGCTGTACCGGCCCGGCCTGGTGCA CATGTATCACGCGCTGACGTGGGGGCCCTTGGTTCGTGAGATCGTTCTGGGCGCCACCGGCAAGGGCATTCGCGACATCC TTGCCACGGAAATCCTTGACCCCCTTGGGTTCCGATGGACCAACTACGGTGTGGCGCCCGAAGATGTACCGCTGGTGGCA CCGAGCCATCCCACCGGCAAGCCGCTGCCCGCACCCATGCGTGCGGCCTTCCGCGCGGTGGTCGGCGGCACCATGCACGA GATCATCCCGATGTCGAACCAGCCGTTCTTCCTCACCGGTGTGGTGCCGTCGTCCAACACCGTCTCCACGGCAAACGAGC TATCCCGATTCGCCGAAATCCTCTGCCGGGGAGGGGAACTCGACGGCGTACGGGTGATGTCACCCGAGACCATCCGGGCC GCGGCGGCACCGGCCCGGCGCCTGCGTCCCGACATGGCGACCGGTGGCATGCCCATGCGCTGGGGAACCGGATACATGTT GGGTTCCAAGCGTTTCGGGCCCTTCGGCCGCAACTCACCGGCGGCCTTCGGACACACCGGCCTTGTCGACATCGCCGTGT GGGCGGACCCAGCGCGCGCCCTGTCCGTCGGCGTGGTCAGCAGCGGTAAGCCCGGCAACCACAAGGAGGCCAAGCGGTAT CCCGCGCTGCTGGACCTGATCGCCGCCGAGGTGCCGCTCGTCGGCTGA
Upstream 100 bases:
>100_bases CACCAAGATCTGGGCAGGCTCCAACGAGATCATGAAGGAACTCATCGGCCGCGACCTGGGCTTCTGAGGCCGCAGAACGG GGTCGGGTAGGAAGGAATTC
Downstream 100 bases:
>100_bases CCGGCCCGACGAGCACCTGTTTCACGGCTTGTTTACTGGGTATACCTGCGCTGGATCGGGGAATCAGTGACCACGGACCC AGTAAAGGAAATACCGACAT
Product: lipase LipE
Products: NA
Alternate protein names: Esterase; Beta-Lactamase Class C; Carboxylesterase; Esterase/Lipase LipP; Beta-Lactamase Family Protein; Esterase A; Secreted Esterase; Esterase/Lipase/Beta-Lactamase; D-Alanyl-D-Alanine Carboxypeptidease; Lactone Hydrolase; Lipase LipE; Hydrolase; Esterase LipL; Secreted Protein; Lipase LipD; Lipase/Esterase/Beta-Lactamase; Beta-N-Acetylglucosaminidase; Fusion Of Enoyl-CoA Hydratase; Beta-Lactamase Protein; Carboxylesterase EstC; Serine Hydrolase; Beta-Lactamase Family
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTASDQAGRIRVPADLDSVTDIAEEDHSDIGPAAVERIWQAARYWYQAGMHPAIQVCLRHRGKVILNRAIGHGWGNAPTD PVDAEKIPVTTDTPFCVYSAAKAISTTVVHLLVERGALSLDDRVCEYLPTFTSRGKDRITIRHVMTHSAGIPVPTGPRPD ITRMDDSEYTREQLGQLRPLYRPGLVHMYHALTWGPLVREIVLGATGKGIRDILATEILDPLGFRWTNYGVAPEDVPLVA PSHPTGKPLPAPMRAAFRAVVGGTMHEIIPMSNQPFFLTGVVPSSNTVSTANELSRFAEILCRGGELDGVRVMSPETIRA AAAPARRLRPDMATGGMPMRWGTGYMLGSKRFGPFGRNSPAAFGHTGLVDIAVWADPARALSVGVVSSGKPGNHKEAKRY PALLDLIAAEVPLVG
Sequences:
>Translated_415_residues MTASDQAGRIRVPADLDSVTDIAEEDHSDIGPAAVERIWQAARYWYQAGMHPAIQVCLRHRGKVILNRAIGHGWGNAPTD PVDAEKIPVTTDTPFCVYSAAKAISTTVVHLLVERGALSLDDRVCEYLPTFTSRGKDRITIRHVMTHSAGIPVPTGPRPD ITRMDDSEYTREQLGQLRPLYRPGLVHMYHALTWGPLVREIVLGATGKGIRDILATEILDPLGFRWTNYGVAPEDVPLVA PSHPTGKPLPAPMRAAFRAVVGGTMHEIIPMSNQPFFLTGVVPSSNTVSTANELSRFAEILCRGGELDGVRVMSPETIRA AAAPARRLRPDMATGGMPMRWGTGYMLGSKRFGPFGRNSPAAFGHTGLVDIAVWADPARALSVGVVSSGKPGNHKEAKRY PALLDLIAAEVPLVG >Mature_414_residues TASDQAGRIRVPADLDSVTDIAEEDHSDIGPAAVERIWQAARYWYQAGMHPAIQVCLRHRGKVILNRAIGHGWGNAPTDP VDAEKIPVTTDTPFCVYSAAKAISTTVVHLLVERGALSLDDRVCEYLPTFTSRGKDRITIRHVMTHSAGIPVPTGPRPDI TRMDDSEYTREQLGQLRPLYRPGLVHMYHALTWGPLVREIVLGATGKGIRDILATEILDPLGFRWTNYGVAPEDVPLVAP SHPTGKPLPAPMRAAFRAVVGGTMHEIIPMSNQPFFLTGVVPSSNTVSTANELSRFAEILCRGGELDGVRVMSPETIRAA AAPARRLRPDMATGGMPMRWGTGYMLGSKRFGPFGRNSPAAFGHTGLVDIAVWADPARALSVGVVSSGKPGNHKEAKRYP ALLDLIAAEVPLVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71983659, Length=179, Percent_Identity=30.1675977653631, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71983666, Length=179, Percent_Identity=30.1675977653631, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17538001, Length=181, Percent_Identity=30.939226519337, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17538474, Length=134, Percent_Identity=30.5970149253731, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44873; Mature: 44742
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASDQAGRIRVPADLDSVTDIAEEDHSDIGPAAVERIWQAARYWYQAGMHPAIQVCLRH CCCCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RGKVILNRAIGHGWGNAPTDPVDAEKIPVTTDTPFCVYSAAKAISTTVVHLLVERGALSL CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH DDRVCEYLPTFTSRGKDRITIRHVMTHSAGIPVPTGPRPDITRMDDSEYTREQLGQLRPL HHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC YRPGLVHMYHALTWGPLVREIVLGATGKGIRDILATEILDPLGFRWTNYGVAPEDVPLVA CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEC PSHPTGKPLPAPMRAAFRAVVGGTMHEIIPMSNQPFFLTGVVPSSNTVSTANELSRFAEI CCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH LCRGGELDGVRVMSPETIRAAAAPARRLRPDMATGGMPMRWGTGYMLGSKRFGPFGRNSP HHCCCCCCCEEEECCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC AAFGHTGLVDIAVWADPARALSVGVVSSGKPGNHKEAKRYPALLDLIAAEVPLVG CCCCCCCCEEEEEECCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TASDQAGRIRVPADLDSVTDIAEEDHSDIGPAAVERIWQAARYWYQAGMHPAIQVCLRH CCCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RGKVILNRAIGHGWGNAPTDPVDAEKIPVTTDTPFCVYSAAKAISTTVVHLLVERGALSL CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH DDRVCEYLPTFTSRGKDRITIRHVMTHSAGIPVPTGPRPDITRMDDSEYTREQLGQLRPL HHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC YRPGLVHMYHALTWGPLVREIVLGATGKGIRDILATEILDPLGFRWTNYGVAPEDVPLVA CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEC PSHPTGKPLPAPMRAAFRAVVGGTMHEIIPMSNQPFFLTGVVPSSNTVSTANELSRFAEI CCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH LCRGGELDGVRVMSPETIRAAAAPARRLRPDMATGGMPMRWGTGYMLGSKRFGPFGRNSP HHCCCCCCCEEEECCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC AAFGHTGLVDIAVWADPARALSVGVVSSGKPGNHKEAKRYPALLDLIAAEVPLVG CCCCCCCCEEEEEECCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA