| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627149
Identifier: 169627149
GI number: 169627149
Start: 42309
End: 42746
Strand: Direct
Name: 169627149
Synonym: MAB_0044
Alternate gene names: NA
Gene position: 42309-42746 (Clockwise)
Preceding gene: 169627148
Following gene: 169627150
Centisome position: 0.83
GC content: 61.19
Gene sequence:
>438_bases ATGAACACAGCGGGATACTGGTCGATCGTCGCTCATGGGGCCGCGGCGATCTGGCTTTATGCGGCGGTGGGATTCGTCTT GATGACCCTAGGGTTCTTTGTGCTGGACTGGACCACACCGGGCCCCTTGCGGCAGATGGTTCGCGCGGGCCTACCCAATG CCGCAGTGATTGCCGCGGCGGGCCTGTTGTCGCAGGCATTCGTGATCGTGCTGGCCATTTACACCGCTTCGGGCAATATC GCCGAAGGCTTGATGCGTACCTTAGTTTTTGGGCTTATCGGTATTGCGGCTCAAACGATCTGCATCAGGCTGATCGAGTG GGTGATGGGCATCGATGTCGGCGAGCTACTGGCGCACCAGCGGTTCGCACCGGCGGCATTGGTGGTGGCCGCGGCCTACC TCGCGGTGGGTCTGGTTATCGCCACCGCGATTCTGTAG
Upstream 100 bases:
>100_bases CAGCCGGGCTGATCACCGACGACGGCGCCGCGTTCGTTCCTCATCGAATACCACTTTTGTAGTCACACACTGGGTTCCAC ACGAGACGGGATGGAGAGCC
Downstream 100 bases:
>100_bases CCCCCGACATATGACGCCTATGCGGTCAATCCCTTTGCGGGGAAGATTGCGAGTGCGGCGCGGCGGGCGGGGGTGCCAGG AAGAACACTCCGCTACCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNTAGYWSIVAHGAAAIWLYAAVGFVLMTLGFFVLDWTTPGPLRQMVRAGLPNAAVIAAAGLLSQAFVIVLAIYTASGNI AEGLMRTLVFGLIGIAAQTICIRLIEWVMGIDVGELLAHQRFAPAALVVAAAYLAVGLVIATAIL
Sequences:
>Translated_145_residues MNTAGYWSIVAHGAAAIWLYAAVGFVLMTLGFFVLDWTTPGPLRQMVRAGLPNAAVIAAAGLLSQAFVIVLAIYTASGNI AEGLMRTLVFGLIGIAAQTICIRLIEWVMGIDVGELLAHQRFAPAALVVAAAYLAVGLVIATAIL >Mature_145_residues MNTAGYWSIVAHGAAAIWLYAAVGFVLMTLGFFVLDWTTPGPLRQMVRAGLPNAAVIAAAGLLSQAFVIVLAIYTASGNI AEGLMRTLVFGLIGIAAQTICIRLIEWVMGIDVGELLAHQRFAPAALVVAAAYLAVGLVIATAIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0719 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007140 [H]
Pfam domain/function: PF03994 DUF350 [H]
EC number: NA
Molecular weight: Translated: 15125; Mature: 15125
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAGYWSIVAHGAAAIWLYAAVGFVLMTLGFFVLDWTTPGPLRQMVRAGLPNAAVIAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH GLLSQAFVIVLAIYTASGNIAEGLMRTLVFGLIGIAAQTICIRLIEWVMGIDVGELLAHQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RFAPAALVVAAAYLAVGLVIATAIL CCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNTAGYWSIVAHGAAAIWLYAAVGFVLMTLGFFVLDWTTPGPLRQMVRAGLPNAAVIAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH GLLSQAFVIVLAIYTASGNIAEGLMRTLVFGLIGIAAQTICIRLIEWVMGIDVGELLAHQ HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RFAPAALVVAAAYLAVGLVIATAIL CCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]