Click here to switch to the map view.

The map label for this gene is ygiC [C]

Identifier: 169627148

GI number: 169627148

Start: 41104

End: 42270

Strand: Direct

Name: ygiC [C]

Synonym: MAB_0043

Alternate gene names: 169627148

Gene position: 41104-42270 (Clockwise)

Preceding gene: 169627147

Following gene: 169627149

Centisome position: 0.81

GC content: 60.84

Gene sequence:

>1167_bases
ATGCGCCGCGAACGTGGCCGGCCCCGCCCCGGCTGGGAGCAGACCGTCGTCTCGCAAGGCATGTGCTACGGCACGCCGGC
CCGGATGGCGGACGGGAGCGACCGTCCGTACTGGGACGAGTCGGTCCACTATGTGTTCGATATGGACGAGGTGCTGTCGC
TCGAGGCGACCGTCGAAGTGCTGCACTCCATGTGTTTGGAGGCCGTTGAACAGGTGGTTCTCCTGGGTCGCTACCACGAT
TTCGGTCTGCCCGAATGGACGTGGGAACATATCGAGAAATCTTGGCGCAGAAGCGATCCGCATCTATATGGTCGCTTTGA
TCTCCGGTACGACGGGCAGCGGCCGCCTGTTCTGCTGGAGTACAACGCCGACACCCCCACTTCGCTGCTGGAAGCCGCTA
TCTTGCAATGGCATTGGAAGACGGATGTATTTCCCGACGATGATCAATGGAATTCACTGCATGAGCAACTCGTGGCGCGC
TGGAAGCATATCGGTGGTCAACTGCCTGGGGCGGAAACGCATTTCACCTGGTCGTCGGCGGACCAGACGGGCGAAGACCA
TGTGACCCTGGCCTATCTGCAGGAGTGCGCGGCCGAGGCTGGCCTCAACACCGTGGGTCTGCCTATTGAGCAAATCGGCT
GGGACCATGACCTCAACCGATTGGTGGATCTGGAAGAGGCGCCGATCGAATCGATCTTCAAGCTGTATCCGTGGGAATGG
ATGATCGATGACGATTTCGGGAGCCACGCCGTGGATCTGCTGCCGGAGACCCTATGGATCGAGCCGCTGTGGAAGACGCT
CCTGAGCAATAAGGCGATTCTGGCGATCCTGTGGGAGATGTACCCAGGCCATCCGAATCTGTTGCCTGCCTACCTGGACA
GTCCCCGGGAGCTGACCGAGTACGTGCGTAAGCCGAAGCTGGGCCGGGAAGGCGCCAATATCACGGTGGTGGGTGCGGGA
TTCGAGACGGCGACCGGCGGTGTCTATGGCGAGGAGGGCTTCGTCTATCAGCTGTTGGATCCGTTACCTCGGTTCGACGG
TATGCGGCCGGTCCTGGGAGCGTGGATAGTCGGTGACGAATCGGCGGGCTTGGGGATACGCGAGACAGCCGGGCTGATCA
CCGACGACGGCGCCGCGTTCGTTCCTCATCGAATACCACTTTTGTAG

Upstream 100 bases:

>100_bases
CCCGGATCTCCAAATCCGATGGTTCCGGGAGTGTTTCACGCTCCCCGTCCGTTTCACGCGGCGGCTTCGGATCCAGTAGT
TCGGGAAGTTCGGGAAGCTG

Downstream 100 bases:

>100_bases
TCACACACTGGGTTCCACACGAGACGGGATGGAGAGCCATGAACACAGCGGGATACTGGTCGATCGTCGCTCATGGGGCC
GCGGCGATCTGGCTTTATGC

Product: putative glutathionylspermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRRERGRPRPGWEQTVVSQGMCYGTPARMADGSDRPYWDESVHYVFDMDEVLSLEATVEVLHSMCLEAVEQVVLLGRYHD
FGLPEWTWEHIEKSWRRSDPHLYGRFDLRYDGQRPPVLLEYNADTPTSLLEAAILQWHWKTDVFPDDDQWNSLHEQLVAR
WKHIGGQLPGAETHFTWSSADQTGEDHVTLAYLQECAAEAGLNTVGLPIEQIGWDHDLNRLVDLEEAPIESIFKLYPWEW
MIDDDFGSHAVDLLPETLWIEPLWKTLLSNKAILAILWEMYPGHPNLLPAYLDSPRELTEYVRKPKLGREGANITVVGAG
FETATGGVYGEEGFVYQLLDPLPRFDGMRPVLGAWIVGDESAGLGIRETAGLITDDGAAFVPHRIPLL

Sequences:

>Translated_388_residues
MRRERGRPRPGWEQTVVSQGMCYGTPARMADGSDRPYWDESVHYVFDMDEVLSLEATVEVLHSMCLEAVEQVVLLGRYHD
FGLPEWTWEHIEKSWRRSDPHLYGRFDLRYDGQRPPVLLEYNADTPTSLLEAAILQWHWKTDVFPDDDQWNSLHEQLVAR
WKHIGGQLPGAETHFTWSSADQTGEDHVTLAYLQECAAEAGLNTVGLPIEQIGWDHDLNRLVDLEEAPIESIFKLYPWEW
MIDDDFGSHAVDLLPETLWIEPLWKTLLSNKAILAILWEMYPGHPNLLPAYLDSPRELTEYVRKPKLGREGANITVVGAG
FETATGGVYGEEGFVYQLLDPLPRFDGMRPVLGAWIVGDESAGLGIRETAGLITDDGAAFVPHRIPLL
>Mature_388_residues
MRRERGRPRPGWEQTVVSQGMCYGTPARMADGSDRPYWDESVHYVFDMDEVLSLEATVEVLHSMCLEAVEQVVLLGRYHD
FGLPEWTWEHIEKSWRRSDPHLYGRFDLRYDGQRPPVLLEYNADTPTSLLEAAILQWHWKTDVFPDDDQWNSLHEQLVAR
WKHIGGQLPGAETHFTWSSADQTGEDHVTLAYLQECAAEAGLNTVGLPIEQIGWDHDLNRLVDLEEAPIESIFKLYPWEW
MIDDDFGSHAVDLLPETLWIEPLWKTLLSNKAILAILWEMYPGHPNLLPAYLDSPRELTEYVRKPKLGREGANITVVGAG
FETATGGVYGEEGFVYQLLDPLPRFDGMRPVLGAWIVGDESAGLGIRETAGLITDDGAAFVPHRIPLL

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=393, Percent_Identity=40.7124681933842, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1790629, Length=363, Percent_Identity=40.495867768595, Blast_Score=258, Evalue=4e-70,
Organism=Escherichia coli, GI1789361, Length=362, Percent_Identity=28.7292817679558, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44128; Mature: 44128

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRERGRPRPGWEQTVVSQGMCYGTPARMADGSDRPYWDESVHYVFDMDEVLSLEATVEV
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH
LHSMCLEAVEQVVLLGRYHDFGLPEWTWEHIEKSWRRSDPHLYGRFDLRYDGQRPPVLLE
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEE
YNADTPTSLLEAAILQWHWKTDVFPDDDQWNSLHEQLVARWKHIGGQLPGAETHFTWSSA
ECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
DQTGEDHVTLAYLQECAAEAGLNTVGLPIEQIGWDHDLNRLVDLEEAPIESIFKLYPWEW
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCCHHHHHHHCCCEE
MIDDDFGSHAVDLLPETLWIEPLWKTLLSNKAILAILWEMYPGHPNLLPAYLDSPRELTE
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHH
YVRKPKLGREGANITVVGAGFETATGGVYGEEGFVYQLLDPLPRFDGMRPVLGAWIVGDE
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEEEECCC
SAGLGIRETAGLITDDGAAFVPHRIPLL
CCCCCHHHHCCEEECCCCEECCCCCCCC
>Mature Secondary Structure
MRRERGRPRPGWEQTVVSQGMCYGTPARMADGSDRPYWDESVHYVFDMDEVLSLEATVEV
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH
LHSMCLEAVEQVVLLGRYHDFGLPEWTWEHIEKSWRRSDPHLYGRFDLRYDGQRPPVLLE
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEE
YNADTPTSLLEAAILQWHWKTDVFPDDDQWNSLHEQLVARWKHIGGQLPGAETHFTWSSA
ECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
DQTGEDHVTLAYLQECAAEAGLNTVGLPIEQIGWDHDLNRLVDLEEAPIESIFKLYPWEW
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCCHHHHHHHCCCEE
MIDDDFGSHAVDLLPETLWIEPLWKTLLSNKAILAILWEMYPGHPNLLPAYLDSPRELTE
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCHHHHHH
YVRKPKLGREGANITVVGAGFETATGGVYGEEGFVYQLLDPLPRFDGMRPVLGAWIVGDE
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHEEEECCC
SAGLGIRETAGLITDDGAAFVPHRIPLL
CCCCCHHHHCCEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]