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The map label for this gene is yjiK [H]

Identifier: 16767560

GI number: 16767560

Start: 4558172

End: 4559077

Strand: Direct

Name: yjiK [H]

Synonym: STM4310

Alternate gene names: 16767560

Gene position: 4558172-4559077 (Clockwise)

Preceding gene: 16767558

Following gene: 16767561

Centisome position: 93.84

GC content: 46.69

Gene sequence:

>906_bases
ATGCGTTACGACATCAGTCGTGACGCGATCTGCTATGGATTTTTTATGAGATTACTAAAACGCGTTATTGTGGTTGTACT
CTTGGGCGTGATTTTATTTATGGTCAGGGACGATATACGCTATGTTTATCAACTGATCCTCAAATATGGTGATAAACCCT
CGGCGCTGGCACTGAGTAGCTATAAAGCGGTTATTCAGCAAAAACCAGTCGCAGGAGTTAAGAGTAACCTTTCAGGTTTG
ACCTACTCCGCCGAAGACAGGATGCTTTTCGCCGTTATTAATAATCCCCCTGAACTGGTCTGGTTAACGACAGAAGGGCA
GCTGGTAGGACGGATGCCGCTGCAGGGCATCCACGACCCGGAGTCTATTGCATGGAGTGGGGGCAACCAGTTCCAGATAG
GCAGTGAGAAAGATGGCGCGGTCTATAAAACACAGGTGGATATTCAGCGCGGCACCATGCAGATAATCTCCATGGTGAAG
CTTGAGGGCTATGACAAAGCAAAAAATAAAGGGCTGGAAGGTACGGCATGGGATGCGAAAAATGAGAGATTATATGCCGC
AAAAGAAAGAAAACCCATTATGATCAAAGAAGTAGAGATGAGCAAAAATGGTATCACCAGAGCGTTGCCTTCTGCCATCA
CTGCGAGTGTGAGCGATGTCTCCGGACTTGAATACCATGCCCCAACGGATTCGCTGCTGGTGTTGTCGGACGAGTCAAAA
ATGATTCTTGAGGTCAGTTCCGAGTGGCGGGTGCGCGATCGATTGTTCCTGACGGCGGAGTGGTCAGGGCTCAGAGACGA
TATCCCCCAGCCAGAAGGGATTGCCATGGATAATGAAAATAATTTGTATATTGTGAGTGAACCAAATCTGTTTTATAAAT
TTTCGTGTGATATACAGAATGACTAA

Upstream 100 bases:

>100_bases
GCTTTTTGTGATAACCCTCACTATTTCATTTTGCCTATGCTAATGGCGCTCGCCATAACCGAATAACGATTCTATCGGAC
ATCGGCTTTATTTTTAAGAA

Downstream 100 bases:

>100_bases
AATCTATTTTTACTGTCACAGTATGCTAAAACAGAACAAGGTTATTAATACCATGATTTGACGACTGTTTGATTCGTTGA
TTCATTGTTGGGGATATTTA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRYDISRDAICYGFFMRLLKRVIVVVLLGVILFMVRDDIRYVYQLILKYGDKPSALALSSYKAVIQQKPVAGVKSNLSGL
TYSAEDRMLFAVINNPPELVWLTTEGQLVGRMPLQGIHDPESIAWSGGNQFQIGSEKDGAVYKTQVDIQRGTMQIISMVK
LEGYDKAKNKGLEGTAWDAKNERLYAAKERKPIMIKEVEMSKNGITRALPSAITASVSDVSGLEYHAPTDSLLVLSDESK
MILEVSSEWRVRDRLFLTAEWSGLRDDIPQPEGIAMDNENNLYIVSEPNLFYKFSCDIQND

Sequences:

>Translated_301_residues
MRYDISRDAICYGFFMRLLKRVIVVVLLGVILFMVRDDIRYVYQLILKYGDKPSALALSSYKAVIQQKPVAGVKSNLSGL
TYSAEDRMLFAVINNPPELVWLTTEGQLVGRMPLQGIHDPESIAWSGGNQFQIGSEKDGAVYKTQVDIQRGTMQIISMVK
LEGYDKAKNKGLEGTAWDAKNERLYAAKERKPIMIKEVEMSKNGITRALPSAITASVSDVSGLEYHAPTDSLLVLSDESK
MILEVSSEWRVRDRLFLTAEWSGLRDDIPQPEGIAMDNENNLYIVSEPNLFYKFSCDIQND
>Mature_301_residues
MRYDISRDAICYGFFMRLLKRVIVVVLLGVILFMVRDDIRYVYQLILKYGDKPSALALSSYKAVIQQKPVAGVKSNLSGL
TYSAEDRMLFAVINNPPELVWLTTEGQLVGRMPLQGIHDPESIAWSGGNQFQIGSEKDGAVYKTQVDIQRGTMQIISMVK
LEGYDKAKNKGLEGTAWDAKNERLYAAKERKPIMIKEVEMSKNGITRALPSAITASVSDVSGLEYHAPTDSLLVLSDESK
MILEVSSEWRVRDRLFLTAEWSGLRDDIPQPEGIAMDNENNLYIVSEPNLFYKFSCDIQND

Specific function: Unknown

COG id: COG3204

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yjiK family [H]

Homologues:

Organism=Escherichia coli, GI145693216, Length=284, Percent_Identity=34.1549295774648, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR009722 [H]

Pfam domain/function: PF06977 SdiA-regulated [H]

EC number: NA

Molecular weight: Translated: 33874; Mature: 33874

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYDISRDAICYGFFMRLLKRVIVVVLLGVILFMVRDDIRYVYQLILKYGDKPSALALSS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
YKAVIQQKPVAGVKSNLSGLTYSAEDRMLFAVINNPPELVWLTTEGQLVGRMPLQGIHDP
HHHHHHCCCCCCHHCCCCCCEEECCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCCC
ESIAWSGGNQFQIGSEKDGAVYKTQVDIQRGTMQIISMVKLEGYDKAKNKGLEGTAWDAK
HHEEECCCCEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
NERLYAAKERKPIMIKEVEMSKNGITRALPSAITASVSDVSGLEYHAPTDSLLVLSDESK
CCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCHHHCCCCEEECCCCCEEEEECCCE
MILEVSSEWRVRDRLFLTAEWSGLRDDIPQPEGIAMDNENNLYIVSEPNLFYKFSCDIQN
EEEEECCCCEEEEEEEEEEECCCCHHCCCCCCCEEEECCCCEEEEECCCEEEEEEECCCC
D
C
>Mature Secondary Structure
MRYDISRDAICYGFFMRLLKRVIVVVLLGVILFMVRDDIRYVYQLILKYGDKPSALALSS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH
YKAVIQQKPVAGVKSNLSGLTYSAEDRMLFAVINNPPELVWLTTEGQLVGRMPLQGIHDP
HHHHHHCCCCCCHHCCCCCCEEECCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCCC
ESIAWSGGNQFQIGSEKDGAVYKTQVDIQRGTMQIISMVKLEGYDKAKNKGLEGTAWDAK
HHEEECCCCEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC
NERLYAAKERKPIMIKEVEMSKNGITRALPSAITASVSDVSGLEYHAPTDSLLVLSDESK
CCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCHHHCCCCEEECCCCCEEEEECCCE
MILEVSSEWRVRDRLFLTAEWSGLRDDIPQPEGIAMDNENNLYIVSEPNLFYKFSCDIQN
EEEEECCCCEEEEEEEEEEECCCCHHCCCCCCCEEEECCCCEEEEECCCEEEEEEECCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA