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The map label for this gene is torD [H]

Identifier: 16767106

GI number: 16767106

Start: 4020186

End: 4020818

Strand: Reverse

Name: torD [H]

Synonym: STM3821

Alternate gene names: 16767106

Gene position: 4020818-4020186 (Counterclockwise)

Preceding gene: 16767107

Following gene: 16767105

Centisome position: 82.78

GC content: 47.71

Gene sequence:

>633_bases
ATGATTAAGCAGCCAGCGCTTGCTCAGGAACAGTACGCCTGCGTATATGCATGGCTGGCGTTACTCTTTTTCCGGGAAGT
GGATGATGAAGGGTTAATACAATTACAGTCCGCGGAGATCGCGGACTGGCTGGCGCTGTTAAAGCGTCAGCCTGCGCTGG
CGGCGTCGGTGGCGTTACTCGAACAAAAAATTGCCGCGCTTAGCCTGCGCCAGGATGCGCAGCTGGAGCTGGCCGCAGAT
TTTTGCGGATTGTTCCTGATGACGGATAAAAAATCGGCCTTGCCCTACGCCTCGCAATACCCGCAGCAGGAACCCGGCAT
GATTAAACATTTATTGCTTGAAGCCGGGATGGAAGTCAACGACGATTTTAAAGAGCCGACCGACCACCTGGCGATTTATC
TGGAATTACTCAGCCATTTACATTTTTCATTGGGTGAATCGTTCCAACAACGGAGAATGAATAAATTACGCCAGAAAACA
TTGTCGTCATTACTGGAATGGCTTCCGGAATTTACAAATAATTGCCTTAAGCATGATCCCTATGGCTTTTATGCTGCGTT
AAGTCAATTATTGTTGGCTATCGTTCGTTTTGATGACGGAAAAGAGGATTTATCCATTGTTGCTGCTGAATAA

Upstream 100 bases:

>100_bases
GAAAAATATACCGGCCCTATGGATAACGTCACGGCGTTTAACGGTCCGGTCGAGATGGTCGCGCAGTGTGAATATGTACC
CGCATCGCAGGGGAATCCGC

Downstream 100 bases:

>100_bases
ACCCTGTGACGGACATCGCAAAATAAATCTTACGATAGTCGGGGGTTATCATATCTATAGGTTTAGCCAATTGTAATTAT
TGATACCAATCAATATCCAT

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIKQPALAQEQYACVYAWLALLFFREVDDEGLIQLQSAEIADWLALLKRQPALAASVALLEQKIAALSLRQDAQLELAAD
FCGLFLMTDKKSALPYASQYPQQEPGMIKHLLLEAGMEVNDDFKEPTDHLAIYLELLSHLHFSLGESFQQRRMNKLRQKT
LSSLLEWLPEFTNNCLKHDPYGFYAALSQLLLAIVRFDDGKEDLSIVAAE

Sequences:

>Translated_210_residues
MIKQPALAQEQYACVYAWLALLFFREVDDEGLIQLQSAEIADWLALLKRQPALAASVALLEQKIAALSLRQDAQLELAAD
FCGLFLMTDKKSALPYASQYPQQEPGMIKHLLLEAGMEVNDDFKEPTDHLAIYLELLSHLHFSLGESFQQRRMNKLRQKT
LSSLLEWLPEFTNNCLKHDPYGFYAALSQLLLAIVRFDDGKEDLSIVAAE
>Mature_210_residues
MIKQPALAQEQYACVYAWLALLFFREVDDEGLIQLQSAEIADWLALLKRQPALAASVALLEQKIAALSLRQDAQLELAAD
FCGLFLMTDKKSALPYASQYPQQEPGMIKHLLLEAGMEVNDDFKEPTDHLAIYLELLSHLHFSLGESFQQRRMNKLRQKT
LSSLLEWLPEFTNNCLKHDPYGFYAALSQLLLAIVRFDDGKEDLSIVAAE

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=194, Percent_Identity=63.4020618556701, Blast_Score=244, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 23801; Mature: 23801

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQPALAQEQYACVYAWLALLFFREVDDEGLIQLQSAEIADWLALLKRQPALAASVALL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHH
EQKIAALSLRQDAQLELAADFCGLFLMTDKKSALPYASQYPQQEPGMIKHLLLEAGMEVN
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCC
DDFKEPTDHLAIYLELLSHLHFSLGESFQQRRMNKLRQKTLSSLLEWLPEFTNNCLKHDP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGFYAALSQLLLAIVRFDDGKEDLSIVAAE
CHHHHHHHHHHHHHHHCCCCCCCCEEEECC
>Mature Secondary Structure
MIKQPALAQEQYACVYAWLALLFFREVDDEGLIQLQSAEIADWLALLKRQPALAASVALL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHH
EQKIAALSLRQDAQLELAADFCGLFLMTDKKSALPYASQYPQQEPGMIKHLLLEAGMEVN
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCC
DDFKEPTDHLAIYLELLSHLHFSLGESFQQRRMNKLRQKTLSSLLEWLPEFTNNCLKHDP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YGFYAALSQLLLAIVRFDDGKEDLSIVAAE
CHHHHHHHHHHHHHHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA