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The map label for this gene is yhjA [H]

Identifier: 16767105

GI number: 16767105

Start: 4018596

End: 4019996

Strand: Reverse

Name: yhjA [H]

Synonym: STM3820

Alternate gene names: 16767105

Gene position: 4019996-4018596 (Counterclockwise)

Preceding gene: 16767106

Following gene: 16767104

Centisome position: 82.76

GC content: 48.25

Gene sequence:

>1401_bases
ATGAAAAAAATTACCCTCTATGCGACAACAGTTATCACCGTTGGGCTGTTATGTTATTTAGGTTTGTCCGGGTATGTATG
GTATTACGACAAACAGCGCAGTAAAAAAAGCGATGTGCAGGCCTCGGTTGTGGGTGAAAATAATAAAATACTGGGTTATT
TCAGGGAGAAAGGATGTGATTATTGTCATACGCCTTCCGCTGAATTGCCTTTTTATTCCTCTTTTCCGGTGGCAAAGCAG
CTAATGGATTACGATATCCAGCTCGGCTACAAGTCGTTTAACCTGGAGGCGGTACGGGCCGCCCTGATTGCGGATACGCC
GGTGCCGCAAAGCGAACTGAATAAAATTGAATGGGTTATGCAACATCAGACTATGCCGCCAACCCGCTATGTCGCGCTGC
ACTGGGCGGGGGGCGTCAGCGATAAAGAGCGTACTGACATCCTGAACTGGATAGCCGATCAGCGTGAGCGCAACTATGCC
AGCGCCGATACCGACCCGGCGCACCGGAATGAACCCGTTCAGCCTATTCCGCGCAATATTCCCGTCGATGCGAAAAAAGT
CGACTTAGGTTTCCGGCTTTATCATGATGAACGTTTATCCGGCGACAGCACAATATCCTGTGCGCATTGTCACGCGTTAA
ATGCGGGCGGTGTCGATGGCAGAAAAACCTCAATTGGCGTTGGCGGTGCGGTAGGACCAATAAATGCGCCGACGGTATTC
AACTCCGTATTTAATATCGAACAATTTTGGGATGGTCGTGCTGCAACCCTGCAGGAGCAAGCAGGAGGACCACCGTTAAA
TCCTATTGAAATGGCCTCTAAATCCTGGGATGAAATTATTAGCAAGCTTGATAAAGATCCTGTCCTGAAAAAAGATTTCC
AGGCGGTTTATCCGCAAGGATTTACCGGGGAAAATATTACTGATGCGATCGCCGAATTCGAAAAAACGTTGATAACGCCG
GATTCCGCCTTTGATAAATGGCTACGTGGAGATGAAAATGCGCTGACCGCGCAACAGAAACACGGTTATCAATTATTTAA
AGAGAATAAATGTGCAACCTGTCACGGCGGTATCATTTTAGGCGGGCGCTCTTTTGAACCATTGGGATTAAAGCGAGACT
TTAATTTTGGCGAAATTACCGCAGCGGATATTGGTCGTATGAACGTCACCAAAGAGGTTCGCGATAAATTACGGCAAAAA
GTCCCGGGCTTACGCAACGTCGCGTTAACAGCGCCTTATTTCCATCGGGGCGACGTACCGACGCTGGATGGAGCGGTAAA
ACTGATGCTGCGTTATCAGGTTGGCACCGATCTGCCGCAAAACGATATTGACGATATCGTCGCCTTCCTGGAAAGCCTGA
CCGGTGTTTATACGCCATATCAACCTGAATATGCGCAATGA

Upstream 100 bases:

>100_bases
TCAATATCCATGATGGGTTTGTATTTAGTATTGACGGGCCTCATGAGTAAAAAAATAAAATTTAATTAATCATGCCGCAA
TACCCCATAAGGATAGTGAT

Downstream 100 bases:

>100_bases
CAATGATGCTTGAAGCCAGAGATCTGTACTGCGAGCGGGACGAGAGGACGCTGTTTCGCGGGCTGTCGTTCACCGTGGAC
GCCGGGGAGTGGGTGCAGGT

Product: cytochrome c peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKKITLYATTVITVGLLCYLGLSGYVWYYDKQRSKKSDVQASVVGENNKILGYFREKGCDYCHTPSAELPFYSSFPVAKQ
LMDYDIQLGYKSFNLEAVRAALIADTPVPQSELNKIEWVMQHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYA
SADTDPAHRNEPVQPIPRNIPVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
NSVFNIEQFWDGRAATLQEQAGGPPLNPIEMASKSWDEIISKLDKDPVLKKDFQAVYPQGFTGENITDAIAEFEKTLITP
DSAFDKWLRGDENALTAQQKHGYQLFKENKCATCHGGIILGGRSFEPLGLKRDFNFGEITAADIGRMNVTKEVRDKLRQK
VPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGTDLPQNDIDDIVAFLESLTGVYTPYQPEYAQ

Sequences:

>Translated_466_residues
MKKITLYATTVITVGLLCYLGLSGYVWYYDKQRSKKSDVQASVVGENNKILGYFREKGCDYCHTPSAELPFYSSFPVAKQ
LMDYDIQLGYKSFNLEAVRAALIADTPVPQSELNKIEWVMQHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYA
SADTDPAHRNEPVQPIPRNIPVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
NSVFNIEQFWDGRAATLQEQAGGPPLNPIEMASKSWDEIISKLDKDPVLKKDFQAVYPQGFTGENITDAIAEFEKTLITP
DSAFDKWLRGDENALTAQQKHGYQLFKENKCATCHGGIILGGRSFEPLGLKRDFNFGEITAADIGRMNVTKEVRDKLRQK
VPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGTDLPQNDIDDIVAFLESLTGVYTPYQPEYAQ
>Mature_466_residues
MKKITLYATTVITVGLLCYLGLSGYVWYYDKQRSKKSDVQASVVGENNKILGYFREKGCDYCHTPSAELPFYSSFPVAKQ
LMDYDIQLGYKSFNLEAVRAALIADTPVPQSELNKIEWVMQHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYA
SADTDPAHRNEPVQPIPRNIPVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
NSVFNIEQFWDGRAATLQEQAGGPPLNPIEMASKSWDEIISKLDKDPVLKKDFQAVYPQGFTGENITDAIAEFEKTLITP
DSAFDKWLRGDENALTAQQKHGYQLFKENKCATCHGGIILGGRSFEPLGLKRDFNFGEITAADIGRMNVTKEVRDKLRQK
VPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGTDLPQNDIDDIVAFLESLTGVYTPYQPEYAQ

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=460, Percent_Identity=82.6086956521739, Blast_Score=805, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 51907; Mature: 51907

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITLYATTVITVGLLCYLGLSGYVWYYDKQRSKKSDVQASVVGENNKILGYFREKGCD
CCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEHHHCCCC
YCHTPSAELPFYSSFPVAKQLMDYDIQLGYKSFNLEAVRAALIADTPVPQSELNKIEWVM
CCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
QHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYASADTDPAHRNEPVQPIPRNI
HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
CCCCEEEECCEEEEECCCCCCCCEEEEHHHEECCCCCCCCCCEEECCCCCCCCCCCCHHH
NSVFNIEQFWDGRAATLQEQAGGPPLNPIEMASKSWDEIISKLDKDPVLKKDFQAVYPQG
HHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCC
FTGENITDAIAEFEKTLITPDSAFDKWLRGDENALTAQQKHGYQLFKENKCATCHGGIIL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCCEECCCEEE
GGRSFEPLGLKRDFNFGEITAADIGRMNVTKEVRDKLRQKVPGLRNVALTAPYFHRGDVP
CCCCCCCCCCCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
TLDGAVKLMLRYQVGTDLPQNDIDDIVAFLESLTGVYTPYQPEYAQ
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKITLYATTVITVGLLCYLGLSGYVWYYDKQRSKKSDVQASVVGENNKILGYFREKGCD
CCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEHHHCCCC
YCHTPSAELPFYSSFPVAKQLMDYDIQLGYKSFNLEAVRAALIADTPVPQSELNKIEWVM
CCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
QHQTMPPTRYVALHWAGGVSDKERTDILNWIADQRERNYASADTDPAHRNEPVQPIPRNI
HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PVDAKKVDLGFRLYHDERLSGDSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF
CCCCEEEECCEEEEECCCCCCCCEEEEHHHEECCCCCCCCCCEEECCCCCCCCCCCCHHH
NSVFNIEQFWDGRAATLQEQAGGPPLNPIEMASKSWDEIISKLDKDPVLKKDFQAVYPQG
HHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCC
FTGENITDAIAEFEKTLITPDSAFDKWLRGDENALTAQQKHGYQLFKENKCATCHGGIIL
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCCEECCCEEE
GGRSFEPLGLKRDFNFGEITAADIGRMNVTKEVRDKLRQKVPGLRNVALTAPYFHRGDVP
CCCCCCCCCCCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
TLDGAVKLMLRYQVGTDLPQNDIDDIVAFLESLTGVYTPYQPEYAQ
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]