Click here to switch to the map view.

The map label for this gene is slsA [H]

Identifier: 16767045

GI number: 16767045

Start: 3959839

End: 3960519

Strand: Direct

Name: slsA [H]

Synonym: STM3761

Alternate gene names: 16767045

Gene position: 3959839-3960519 (Clockwise)

Preceding gene: 16767041

Following gene: 16767049

Centisome position: 81.52

GC content: 52.28

Gene sequence:

>681_bases
ATGTCTACACCCGCGAATTTTAACGGTCAACGCCCTGCCATTGATGCTAACGACGCAGTAATGCTGCTGATTGATCACCA
AAGTGGCCTGTTTCAGACCGTCGGCGACATGCCGATGCCGGAATTACGCGCGCGCGCCGCGGCGCTGGCTAAGATCGCCA
CCTTATGCAATATGCCGGTCATTACTACCGCATCCGTACCACAGGGACCGAATGGTCCGCTGATTCCGGAAATCCATGCG
AATGCGCCCCACGCGCAATATGTCGCGCGTAAAGGGGAAATTAATGCCTGGGATAATGCCGATTTTGTACAAGCGGTAAA
AGCGACAGGCCGTAAAACGCTGATCATCGCTGGCACTATTACCAGTGTCTGTATGGCTTTTCCAGCCATCAGCGCCGTCG
CGGAAGGGTACAAGGTATTTGCGGTAATTGATGCCTCCGGTACGTACAGTAAAATGGCACAGGAAATTACGATGGCCCGC
GTGGTGCAGGCGGGCGTAGTACCAATGGATACCGCGGCGGTAGCCTCTGAGCTGCAACGTACCTGGAATCGGGAAGATGC
CGCAGAATGGGCGGATGTATATACCAAAATATTCCCGGCTTATCAGCTACTGATTGAAAGTTATACCAAAGCGCAGGAAG
TAGTAAAAAATAATGAACTGCTGGATTCTCAACGCGCATAA

Upstream 100 bases:

>100_bases
GGATTACTGTCATCAGCTTAAAAACGGAAATCGCCCCGGCGATTAATGACTTTAACACTGATAGTGACTATCAGTGAAAG
GCAACAACAAGGAATGAATT

Downstream 100 bases:

>100_bases
ATAACGCCCTGAAGAGGCTAAATAGCCCCATTTAATGGGGCTATTTTACTTGCCATTTTGGACCTGGGCAGTGCTCGCCA
AAACGCGTTAGCGTTTTGAA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHA
NAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMAR
VVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA

Sequences:

>Translated_226_residues
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHA
NAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMAR
VVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
>Mature_225_residues
STPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHAN
APHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARV
VQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=195, Percent_Identity=48.2051282051282, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24306; Mature: 24175

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPV
CCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
ITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEHHH
TSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQR
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure 
STPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPV
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCE
ITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTI
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEHHH
TSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQR
HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]