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The map label for this gene is yhjH [H]

Identifier: 16766897

GI number: 16766897

Start: 3786584

End: 3787351

Strand: Reverse

Name: yhjH [H]

Synonym: STM3611

Alternate gene names: 16766897

Gene position: 3787351-3786584 (Counterclockwise)

Preceding gene: 16766899

Following gene: 16766896

Centisome position: 77.97

GC content: 54.17

Gene sequence:

>768_bases
ATGATAAAGCAGGTTATCCAGCAGCTACGCGTTCCTGATGCAGGTATAGAGAATTTGCAGGAACGGCGCTATTGGCTGCA
ATGCGAGCGTGCCTATACTTACCAGCCGATATACCAGACGGATGGCCGTCTGATGGCGGTTGAACTTCTCACTGTCGTCA
CCCATCCTGATAACCCTTCCAGACGTATTGCCCCGGATCGTTATTTCGCGGAGTTAGCGGTTCGACACCGCATTGACGTA
GTGAAAGAACAACTTCATCAGCTCGAACAAAAAGCGGATTTTTTCACTCGCCATCACTTATTGGCATCGGTCAATGTCGA
CGGCCCTACGCTGATTGCCATGCGACGACAGCCGGACATTCTGGCAGCGATGGAGCGCTTACCCTGGCTGCGTTTCGAAC
TGGTGGAACATATTCGTTTGCCGAAAGACTCCTCTTTCGCCTCGATGTGTGAGTTCGGCCCGCTGTGGCTGGATGATTTT
GGTACCGGTATGGCCAATTTTTCAGCGCTGAGCGAAGTGCGTTATGACTACATTAAAGTGGCGCGCGAGCTGTTCGTCAT
GCTGCGTCAGTCCCCGGAGGGACGCAACCTGTTCACTCTGCTGCTGCAACTGATGAACCGCTACTGCCGCGGCGTTATTG
TCGAGGGCGTGGAGACGCTGGAAGAGTGGCGTGATGTGCAGCGTTCGCCCGCCTTTGCCGCCCAGGGCTATTTTCTTTCT
CGACCCGTGCCGCTGATATCGCTCGAAGAGGTGATTCTGACCCTGTAA

Upstream 100 bases:

>100_bases
TTTTTATTTTGCCAGGGACCGAGGGTAAAGTTCTCTGCCTGAACGCCGATAACCTTTGACGAGTCCGGACAGTCACACTC
CCATTAACAGGACAACTGAG

Downstream 100 bases:

>100_bases
CGCCAGACTGTTCCCGTAATACGTGGTATTACGAGGCGCGGTCATCCTCCTTTTTCGTCTGGCTGAACTATCTTTAGGAC
AGGCAAGGGAAGAAGTGAGG

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRLMAVELLTVVTHPDNPSRRIAPDRYFAELAVRHRIDV
VKEQLHQLEQKADFFTRHHLLASVNVDGPTLIAMRRQPDILAAMERLPWLRFELVEHIRLPKDSSFASMCEFGPLWLDDF
GTGMANFSALSEVRYDYIKVARELFVMLRQSPEGRNLFTLLLQLMNRYCRGVIVEGVETLEEWRDVQRSPAFAAQGYFLS
RPVPLISLEEVILTL

Sequences:

>Translated_255_residues
MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRLMAVELLTVVTHPDNPSRRIAPDRYFAELAVRHRIDV
VKEQLHQLEQKADFFTRHHLLASVNVDGPTLIAMRRQPDILAAMERLPWLRFELVEHIRLPKDSSFASMCEFGPLWLDDF
GTGMANFSALSEVRYDYIKVARELFVMLRQSPEGRNLFTLLLQLMNRYCRGVIVEGVETLEEWRDVQRSPAFAAQGYFLS
RPVPLISLEEVILTL
>Mature_255_residues
MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRLMAVELLTVVTHPDNPSRRIAPDRYFAELAVRHRIDV
VKEQLHQLEQKADFFTRHHLLASVNVDGPTLIAMRRQPDILAAMERLPWLRFELVEHIRLPKDSSFASMCEFGPLWLDDF
GTGMANFSALSEVRYDYIKVARELFVMLRQSPEGRNLFTLLLQLMNRYCRGVIVEGVETLEEWRDVQRSPAFAAQGYFLS
RPVPLISLEEVILTL

Specific function: A bis-(3'-5') cyclic diguanylic acid (c-di-GMP) phosphodiesterase involved in regulating the levels of c-di-GMP that control cell motility (the flagella) and adhesion (adhesive curli fimbriae). The YhjH effect on flagella is controlled via the c-di-GMP-bi

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87082280, Length=255, Percent_Identity=79.2156862745098, Blast_Score=426, Evalue=1e-121,
Organism=Escherichia coli, GI87081845, Length=136, Percent_Identity=28.6764705882353, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: =3.1.4.52 [H]

Molecular weight: Translated: 29777; Mature: 29777

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRLMAVELLTVVTHPDNPS
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCHHHCCCCCHHHHHHHHHCCCCCCC
RRIAPDRYFAELAVRHRIDVVKEQLHQLEQKADFFTRHHLLASVNVDGPTLIAMRRQPDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCHH
LAAMERLPWLRFELVEHIRLPKDSSFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKV
HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
ARELFVMLRQSPEGRNLFTLLLQLMNRYCRGVIVEGVETLEEWRDVQRSPAFAAQGYFLS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEECC
RPVPLISLEEVILTL
CCCCHHHHHHHHHCC
>Mature Secondary Structure
MIKQVIQQLRVPDAGIENLQERRYWLQCERAYTYQPIYQTDGRLMAVELLTVVTHPDNPS
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCHHHCCCCCHHHHHHHHHCCCCCCC
RRIAPDRYFAELAVRHRIDVVKEQLHQLEQKADFFTRHHLLASVNVDGPTLIAMRRQPDI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCHH
LAAMERLPWLRFELVEHIRLPKDSSFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKV
HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
ARELFVMLRQSPEGRNLFTLLLQLMNRYCRGVIVEGVETLEEWRDVQRSPAFAAQGYFLS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEECC
RPVPLISLEEVILTL
CCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]