Definition Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession NC_003197
Length 4,857,432

Click here to switch to the map view.

The map label for this gene is 16766890

Identifier: 16766890

GI number: 16766890

Start: 3777236

End: 3778825

Strand: Reverse

Name: 16766890

Synonym: STM3604

Alternate gene names: NA

Gene position: 3778825-3777236 (Counterclockwise)

Preceding gene: 16766892

Following gene: 16766888

Centisome position: 77.79

GC content: 56.6

Gene sequence:

>1590_bases
ATGACGAATAGCGCTTCGCAGGCGACACGCGCGCCTTTTGAACATAGCCTGGGGATTATCCGCCAGGCATCAATAGAAAT
CCTGCTGCTGCTGGGTATTCATACCACAGAGGGAAAAGAGCCCCGGTGGTTCATGGAACAACTTGAGCAGGCGCGTCTTA
ACCTGGGCGGTTGGGGCGCGGTGGCGAAAAAATTGCGGATAAATGACGCGCAGTTGAGCCAGTTTATGCTGCAACTGCGT
CACCTTCAGCAGCATGTTCCCCAGTATGACAGCGGGCAAGAGGTGAGCGAAAATCAACTCCTTGCCGCGTTGCGTTTTGT
CACCTCGCTGGAGCATCTACGTCAGCAGCAGCCGCTACTGACGTATCAAACTGAGCTGGAAGAACCCGACCAGGAGGCGC
ATCTTGAGGCGCAGCGTCAGCTTCGGGCGATAGAACTGACGTTAAAAGCGCTTATTGCGCGCGCATGGCCGGATCGGGCG
TCGCTGAATCACTACCTCAAGCAACATTTCGGCCCGGACCGTTTGCGCCAGTGGTTAAAACAGGGAGAAGATCAACATGC
GCTGGAGGGCATGTTGTTCAGCGAACTGGCGCTTATGGTGGTCGATAAAAAATTGTTTGCCCGTCATTACGTCAGAATTT
TTAATGATGCCTCAGCGTTAACGCTGTTCGCCGAGTCGCGCACCACTCTGCGTATGTTTCTGGATGATTGCCGCCTTGCG
CGAAACGAGGTTATCGCCAGGCAGCCGCTTACCTCAGCGCAGCTTATGCTGCTAAACGTTCAGTATCAGCAAATCGTTCG
GCCCATCCAGCGCGCCTATGCCGAAAAACGTACCCGCGTGAATCCCGCTTCGTTTCTGCTGGCGGATGAACGTGAATTGC
GCCAGTTCTGGGAAACCGCGCGGCTTAAAGATCGGCAGGCCGGGGGAGATAAGCATGAGATTAGCGAGAGCATAGAACCA
CCGCGTAAGCGGCCTCCGCGTACGCCTGAAGAGCGTGAGCAACTTATTTCCGGCGCTTTGTGGGGCGCGGTTGGCGTCAT
GACGCTGGCGATACTGGCGGGCGCGTTCTGGCTATTTAGTTCGTCGTCGCCAGGCTCCGATAACGGGCAAGCTCCCGCAA
TGGCGCAGGATGAACCGCCGCGCGAGGCGCCTTCCGCGCGGGAAACGCTCAATCATATGGGGATTACCTGGGATGCGTTT
ACCATGCGGGCGGCGATAGAGCGCAATGATACGCGGGTGACGGCGCTGTTCCTCCAGGGCGGAATGAACTGGCAGCTCGC
GTGGACGGAGCAGGCGTTTGCGGCAGGACATACCGAGGTGCTGCAACTGTTGTTGCGTTATCCCGCGCTGATGGATGAGG
TCAAACCCTGCCGACGATTTATCACAACGTTAAGTCATGACATGTCGAGCGGCGCGCCGCTGACCGCGATGCATAAAACC
TATTTGCAAACGTTTTGCACCGTTCCGGCTGTTGTGACGCGCCAGCAGCACGATACGGAGCAGGCCCGATTGCGCGCTCA
GGCCCGGCCCAGCGCAGACAATAAAAAATGGCTGAAAATTCAGTCAGCCATTTATGATGCGATTCACTGA

Upstream 100 bases:

>100_bases
TTAAGTCACTGAAATGTGGCTAAATCTGTTATATCTATGAAAAAACATAATTAAAAGAAAACGAAGATCTCGTCGCGGGA
TCGTCTTTTTAGGGAAGATA

Downstream 100 bases:

>100_bases
GGCCGGAGCAGGTTAAGGCTCTCCGTAAAGGCCAATCAGGCGGCGCACCACGCCATTGGTCCAGCCGAACCCGTCCTGTA
GCGGATACTCGCCCCCGCCG

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLR
HLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRA
SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA
RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEP
PRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFSSSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAF
TMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT
YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH

Sequences:

>Translated_529_residues
MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLR
HLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRA
SLNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA
RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEP
PRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFSSSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAF
TMRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT
YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH
>Mature_528_residues
TNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGAVAKKLRINDAQLSQFMLQLRH
LQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLLTYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRAS
LNHYLKQHFGPDRLRQWLKQGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLAR
NEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETARLKDRQAGGDKHEISESIEPP
RKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFSSSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFT
MRAAIERNDTRVTALFLQGGMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKTY
LQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60354; Mature: 60223

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGA
CCCCCCHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH
VAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLL
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
TYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLNHYLKQHFGPDRLRQWLK
EEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
QGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETA
HHHHHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH
RLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFS
HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFTMRAAIERNDTRVTALFLQG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEEEEC
GMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT
CCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNSASQATRAPFEHSLGIIRQASIEILLLLGIHTTEGKEPRWFMEQLEQARLNLGGWGA
CCCCCHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHH
VAKKLRINDAQLSQFMLQLRHLQQHVPQYDSGQEVSENQLLAALRFVTSLEHLRQQQPLL
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
TYQTELEEPDQEAHLEAQRQLRAIELTLKALIARAWPDRASLNHYLKQHFGPDRLRQWLK
EEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
QGEDQHALEGMLFSELALMVVDKKLFARHYVRIFNDASALTLFAESRTTLRMFLDDCRLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
RNEVIARQPLTSAQLMLLNVQYQQIVRPIQRAYAEKRTRVNPASFLLADERELRQFWETA
HHHHHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH
RLKDRQAGGDKHEISESIEPPRKRPPRTPEEREQLISGALWGAVGVMTLAILAGAFWLFS
HHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SSSPGSDNGQAPAMAQDEPPREAPSARETLNHMGITWDAFTMRAAIERNDTRVTALFLQG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHHHHCCCCEEEEEEEEC
GMNWQLAWTEQAFAAGHTEVLQLLLRYPALMDEVKPCRRFITTLSHDMSSGAPLTAMHKT
CCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
YLQTFCTVPAVVTRQQHDTEQARLRAQARPSADNKKWLKIQSAIYDAIH
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA