| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is ilvD [H]
Identifier: 16766817
GI number: 16766817
Start: 3695271
End: 3696986
Strand: Direct
Name: ilvD [H]
Synonym: STM3531
Alternate gene names: 16766817
Gene position: 3695271-3696986 (Clockwise)
Preceding gene: 16766813
Following gene: 16766818
Centisome position: 76.07
GC content: 53.73
Gene sequence:
>1716_bases ATGAGCCAAAAATGTCAACATGCTCGCGACCTGTGGTCGCAGCTCGACGCCCTGCGTCTTGGAATGAATTACAGCAAAGA AGATGTCAATAAACTGCAGGTCCTGGTGGATGATTGCTATGGTGAAAGTCATCCGGGCAGTTTCCATCTTAACCAACTGG GCGATGAAGCCGTGCTGGGTGTTCATGAAAGCGGCGGTCGCGCGGTCCGTCACCATGTGACGGATATCTGCGACGGCTGG GGTCAGGGCCACGATGGGATGAACTACATCCTGGCATCTCGCGAAGCCATTGCCAACATGGTCGAAATTCATGCCTCAGT GGTGCCTTATGATGCCGGTATTCTGATCTCAAGCTGCGATAAATCTATCCCGGCGCATCTGATTGCCGCCGCACGCCTGA ACCTGCCGCTACTGCATATTCCCGGCGGTTCTATGCGTCCGGCACCGAATATGAGTACTTCTGACCTCGGTGGGATCACT GCTAAGTTGAGGAAAGGCGAAATCGGCATTCAGCAAGTGGAAGCCATGCAGCAATGCGGTTGCCCCACCGCCGGAGCCTG CCAGTTTATGGGAACGGCCAGTACCATGCAGTGCATGTCGGAGGCCTTGGGGCTGGCCCTGCCAGGCAGCGCTTTGCTGC CATCGACCCTGGCGGAAATTCGCCGCGTTGCCAGAACTGCAGGCCACCAGGCGCTGTATCTGGCGGAGAAAAATATCACC ACCCATAAGATCCTGACTCCTGCGGCGTTTGAAAATGCTATCAAAGTCCATGCTGCTATTGGTGGCAGCACCAATGCGAT GATCCACCTTCCGGCCATCGCTCATGAACTTGGATGGGAGCTGAAGCCCGAACTGTTTGATCGGATCAATAACGAAATCC CTTATCTGACCAATATTCAGCCCAGCGGTGAATACGTTACCGAAATGATGTGGTTCGCTGGCGGCGTGCCAATGGTGCAA TGGTATCTGCGCGATTATCTGGATCTTGATGTGCTTACCGTGACTGGCCGTACGCTCGGCGACAACCTGGAAATGCTCCA TCAATCCGGCTTCTTTACCCGCAACCACGGTTACCTCAACAATTACAAAGTCAGTCCGGAGGAGGTGATCCGTAAACCAG AAAATGCCACCAAAAAAGGGTCGATTGCGGTACTGAAAGGCAACATCGCGCCTGAAGGAGCGGTCATTAAATACGCGGCC TGTGCGCCGGATATGCACCACCATACCGGTCCTGCTCGGGTCTTTAACTCCGAAGAAGACGCTCAGCAGGCCATCATCCA TAACCATATCGAACCCGGCGACGTCATTTTCATTCGCTACGAAGGCGCAAAAGGCTCTGGCGCACCGGAAATGCTGATGA CTACCGATGCCATAGTGTATGACAAACGCCTCGACGGAAAAGTCGCATTGATTACCGACGGTCGTTTCTCTGGAGCGACC AGCGGGCCATGTGTCGGACACGTCTCGCCAGAAGCCGCTGATGGGGGGCCGATTGCCCTGGTGGAAGATGGTGATTTAAT CGAAATGGATGTGAAAGGCCGCAAGCTCAATATTGTAGGGATCGACGGGATGCCTAAAACAGAAGAGGAAATACGCCGCT GTCTTGAAGAGCGTCGAGCAAGCTGGAAGAAACCTGATTATTCAAACCGTCGCGGCGTCTTTAAACAGTTCACCGCTAAT GCAACATCATTAATGGCCGGAGCCTGGCTTAAATAA
Upstream 100 bases:
>100_bases TTTTCAGCTTACCTTCTGTTACCGCTCGTCCTGCAGGTAGCAGCAACACCCCTAACACCTCGACGCCGGGTGCGTCACTT AAACAGGAAGGAATCGCCAA
Downstream 100 bases:
>100_bases TATCCCTGGCGGGCTACGGCTCGCCTGTTTTAAGGATCAATACATGACTCAGATTACGAAATTTCACGGCGTATTTCCGC CAGTTCCGACCATTGTTAAT
Product: dihydroxyacid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MSQKCQHARDLWSQLDALRLGMNYSKEDVNKLQVLVDDCYGESHPGSFHLNQLGDEAVLGVHESGGRAVRHHVTDICDGW GQGHDGMNYILASREAIANMVEIHASVVPYDAGILISSCDKSIPAHLIAAARLNLPLLHIPGGSMRPAPNMSTSDLGGIT AKLRKGEIGIQQVEAMQQCGCPTAGACQFMGTASTMQCMSEALGLALPGSALLPSTLAEIRRVARTAGHQALYLAEKNIT THKILTPAAFENAIKVHAAIGGSTNAMIHLPAIAHELGWELKPELFDRINNEIPYLTNIQPSGEYVTEMMWFAGGVPMVQ WYLRDYLDLDVLTVTGRTLGDNLEMLHQSGFFTRNHGYLNNYKVSPEEVIRKPENATKKGSIAVLKGNIAPEGAVIKYAA CAPDMHHHTGPARVFNSEEDAQQAIIHNHIEPGDVIFIRYEGAKGSGAPEMLMTTDAIVYDKRLDGKVALITDGRFSGAT SGPCVGHVSPEAADGGPIALVEDGDLIEMDVKGRKLNIVGIDGMPKTEEEIRRCLEERRASWKKPDYSNRRGVFKQFTAN ATSLMAGAWLK
Sequences:
>Translated_571_residues MSQKCQHARDLWSQLDALRLGMNYSKEDVNKLQVLVDDCYGESHPGSFHLNQLGDEAVLGVHESGGRAVRHHVTDICDGW GQGHDGMNYILASREAIANMVEIHASVVPYDAGILISSCDKSIPAHLIAAARLNLPLLHIPGGSMRPAPNMSTSDLGGIT AKLRKGEIGIQQVEAMQQCGCPTAGACQFMGTASTMQCMSEALGLALPGSALLPSTLAEIRRVARTAGHQALYLAEKNIT THKILTPAAFENAIKVHAAIGGSTNAMIHLPAIAHELGWELKPELFDRINNEIPYLTNIQPSGEYVTEMMWFAGGVPMVQ WYLRDYLDLDVLTVTGRTLGDNLEMLHQSGFFTRNHGYLNNYKVSPEEVIRKPENATKKGSIAVLKGNIAPEGAVIKYAA CAPDMHHHTGPARVFNSEEDAQQAIIHNHIEPGDVIFIRYEGAKGSGAPEMLMTTDAIVYDKRLDGKVALITDGRFSGAT SGPCVGHVSPEAADGGPIALVEDGDLIEMDVKGRKLNIVGIDGMPKTEEEIRRCLEERRASWKKPDYSNRRGVFKQFTAN ATSLMAGAWLK >Mature_570_residues SQKCQHARDLWSQLDALRLGMNYSKEDVNKLQVLVDDCYGESHPGSFHLNQLGDEAVLGVHESGGRAVRHHVTDICDGWG QGHDGMNYILASREAIANMVEIHASVVPYDAGILISSCDKSIPAHLIAAARLNLPLLHIPGGSMRPAPNMSTSDLGGITA KLRKGEIGIQQVEAMQQCGCPTAGACQFMGTASTMQCMSEALGLALPGSALLPSTLAEIRRVARTAGHQALYLAEKNITT HKILTPAAFENAIKVHAAIGGSTNAMIHLPAIAHELGWELKPELFDRINNEIPYLTNIQPSGEYVTEMMWFAGGVPMVQW YLRDYLDLDVLTVTGRTLGDNLEMLHQSGFFTRNHGYLNNYKVSPEEVIRKPENATKKGSIAVLKGNIAPEGAVIKYAAC APDMHHHTGPARVFNSEEDAQQAIIHNHIEPGDVIFIRYEGAKGSGAPEMLMTTDAIVYDKRLDGKVALITDGRFSGATS GPCVGHVSPEAADGGPIALVEDGDLIEMDVKGRKLNIVGIDGMPKTEEEIRRCLEERRASWKKPDYSNRRGVFKQFTANA TSLMAGAWLK
Specific function: Unknown
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI1786464, Length=520, Percent_Identity=38.6538461538462, Blast_Score=292, Evalue=4e-80, Organism=Escherichia coli, GI2367371, Length=490, Percent_Identity=40.6122448979592, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI48994964, Length=606, Percent_Identity=34.4884488448845, Blast_Score=280, Evalue=3e-76, Organism=Escherichia coli, GI1788157, Length=463, Percent_Identity=30.6695464362851, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6322476, Length=562, Percent_Identity=33.8078291814947, Blast_Score=269, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 62014; Mature: 61882
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKCQHARDLWSQLDALRLGMNYSKEDVNKLQVLVDDCYGESHPGSFHLNQLGDEAVLG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCCEEEE VHESGGRAVRHHVTDICDGWGQGHDGMNYILASREAIANMVEIHASVVPYDAGILISSCD EECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC KSIPAHLIAAARLNLPLLHIPGGSMRPAPNMSTSDLGGITAKLRKGEIGIQQVEAMQQCG CCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC CPTAGACQFMGTASTMQCMSEALGLALPGSALLPSTLAEIRRVARTAGHQALYLAEKNIT CCCCCCHHCCCCHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCC THKILTPAAFENAIKVHAAIGGSTNAMIHLPAIAHELGWELKPELFDRINNEIPYLTNIQ HHEEECHHHHHCCEEEEEEECCCCCEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEECCC PSGEYVTEMMWFAGGVPMVQWYLRDYLDLDVLTVTGRTLGDNLEMLHQSGFFTRNHGYLN CCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCEEECCCCCC NYKVSPEEVIRKPENATKKGSIAVLKGNIAPEGAVIKYAACAPDMHHHTGPARVFNSEED CCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHCCCCHHH AQQAIIHNHIEPGDVIFIRYEGAKGSGAPEMLMTTDAIVYDKRLDGKVALITDGRFSGAT HHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCCCCCC SGPCVGHVSPEAADGGPIALVEDGDLIEMDVKGRKLNIVGIDGMPKTEEEIRRCLEERRA CCCEEECCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH SWKKPDYSNRRGVFKQFTANATSLMAGAWLK CCCCCCCCCCCCHHHHHHCCHHHHHHCCCCC >Mature Secondary Structure SQKCQHARDLWSQLDALRLGMNYSKEDVNKLQVLVDDCYGESHPGSFHLNQLGDEAVLG CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCCEEEE VHESGGRAVRHHVTDICDGWGQGHDGMNYILASREAIANMVEIHASVVPYDAGILISSCD EECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC KSIPAHLIAAARLNLPLLHIPGGSMRPAPNMSTSDLGGITAKLRKGEIGIQQVEAMQQCG CCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC CPTAGACQFMGTASTMQCMSEALGLALPGSALLPSTLAEIRRVARTAGHQALYLAEKNIT CCCCCCHHCCCCHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCC THKILTPAAFENAIKVHAAIGGSTNAMIHLPAIAHELGWELKPELFDRINNEIPYLTNIQ HHEEECHHHHHCCEEEEEEECCCCCEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEECCC PSGEYVTEMMWFAGGVPMVQWYLRDYLDLDVLTVTGRTLGDNLEMLHQSGFFTRNHGYLN CCHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCEEECCCCCC NYKVSPEEVIRKPENATKKGSIAVLKGNIAPEGAVIKYAACAPDMHHHTGPARVFNSEED CCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCHHCCCCHHH AQQAIIHNHIEPGDVIFIRYEGAKGSGAPEMLMTTDAIVYDKRLDGKVALITDGRFSGAT HHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEEECCCCCEEEEEECCCCCCCC SGPCVGHVSPEAADGGPIALVEDGDLIEMDVKGRKLNIVGIDGMPKTEEEIRRCLEERRA CCCEEECCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH SWKKPDYSNRRGVFKQFTANATSLMAGAWLK CCCCCCCCCCCCHHHHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA